RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 ACTR5Q9H9F9 607 aaPredicted RBP22.67■■□□□ 1.22
AP1S3-205ENST00000415298 HELLSQ9NRZ9 838 aa22.67■■□□□ 1.22
AP1S3-205ENST00000415298 MTMR6Q9Y217 621 aa22.67■■□□□ 1.22
AP1S3-205ENST00000415298 FAM177A1Q8N128 213 aaPredicted RBP22.66■■□□□ 1.22
AP1S3-205ENST00000415298 LSG1Q9H089 658 aaKnown RBP22.66■■□□□ 1.22
AP1S3-205ENST00000415298 PALD1Q9ULE6 856 aa22.66■■□□□ 1.22
AP1S3-205ENST00000415298 KIF4AO95239 1232 aa22.66■■□□□ 1.22
AP1S3-205ENST00000415298 EIF4BP23588 611 aaKnown RBP22.66■■□□□ 1.22
AP1S3-205ENST00000415298 DACT2Q5SW24 774 aa22.66■■□□□ 1.22
AP1S3-205ENST00000415298 NAA16Q6N069 864 aaPredicted RBP22.66■■□□□ 1.22
AP1S3-205ENST00000415298 RABEP2Q9H5N1 569 aa22.66■■□□□ 1.22
AP1S3-205ENST00000415298 ZSWIM4Q9H7M6 989 aa22.66■■□□□ 1.22
AP1S3-205ENST00000415298 UTP6Q9NYH9 597 aaKnown RBP22.66■■□□□ 1.22
AP1S3-205ENST00000415298 CCDC88AQ3V6T2 1871 aa22.66■■□□□ 1.22
AP1S3-205ENST00000415298 USP17L3A6NCW0 530 aa22.65■■□□□ 1.22
AP1S3-205ENST00000415298 USP17L4A6NCW7 530 aa22.65■■□□□ 1.22
AP1S3-205ENST00000415298 USP17L1Q7RTZ2 530 aa22.65■■□□□ 1.22
AP1S3-205ENST00000415298 DZIP1Q86YF9 867 aaKnown RBP22.65■■□□□ 1.22
AP1S3-205ENST00000415298 MYBPC3Q14896 1274 aa22.65■■□□□ 1.22
AP1S3-205ENST00000415298 RNF187Q5TA31 235 aaPredicted RBP22.65■■□□□ 1.22
AP1S3-205ENST00000415298 STRIP1Q5VSL9 837 aa22.65■■□□□ 1.22
AP1S3-205ENST00000415298 NIM1KQ8IY84 436 aa22.65■■□□□ 1.22
AP1S3-205ENST00000415298 MAPK8IP1Q9UQF2 711 aa22.65■■□□□ 1.22
AP1S3-205ENST00000415298 A6NHS1 94 aa22.64■■□□□ 1.22
AP1S3-205ENST00000415298 GPAA1O43292 621 aa22.64■■□□□ 1.22
AP1S3-205ENST00000415298 DYNLL1P63167 89 aaKnown RBP22.64■■□□□ 1.22
AP1S3-205ENST00000415298 TMED1Q13445 227 aa22.64■■□□□ 1.22
AP1S3-205ENST00000415298 GNPTABQ3T906 1256 aa22.64■■□□□ 1.22
AP1S3-205ENST00000415298 ARMT1Q9H993 441 aa22.64■■□□□ 1.22
AP1S3-205ENST00000415298 ZNF280DQ6N043 979 aa22.64■■□□□ 1.21
AP1S3-205ENST00000415298 ZNRF3Q9ULT6 936 aa22.64■■□□□ 1.21
AP1S3-205ENST00000415298 SMAPO00193 183 aa22.63■■□□□ 1.21
AP1S3-205ENST00000415298 PSMD14O00487 310 aa22.63■■□□□ 1.21
AP1S3-205ENST00000415298 MGRN1O60291 552 aa22.63■■□□□ 1.21
AP1S3-205ENST00000415298 E2F6O75461 281 aa22.63■■□□□ 1.21
AP1S3-205ENST00000415298 CAPN15O75808 1086 aa22.63■■□□□ 1.21
AP1S3-205ENST00000415298 ZNF189O75820 626 aaPredicted RBP22.63■■□□□ 1.21
AP1S3-205ENST00000415298 CYP11B2P19099 503 aa22.63■■□□□ 1.21
AP1S3-205ENST00000415298 SCNN1DP51172 638 aa22.63■■□□□ 1.21
AP1S3-205ENST00000415298 JDP2Q8WYK2 163 aa22.63■■□□□ 1.21
AP1S3-205ENST00000415298 MTRQ99707 1265 aa22.63■■□□□ 1.21
AP1S3-205ENST00000415298 UPF3BQ9BZI7 483 aaKnown RBP22.63■■□□□ 1.21
AP1S3-205ENST00000415298 GGA2Q9UJY4 613 aa22.63■■□□□ 1.21
AP1S3-205ENST00000415298 HPCAL4Q9UM19 191 aa22.63■■□□□ 1.21
AP1S3-205ENST00000415298 FOXP2O15409 715 aa22.63■■□□□ 1.21
AP1S3-205ENST00000415298 MBD4O95243 580 aa22.63■■□□□ 1.21
AP1S3-205ENST00000415298 GET4Q7L5D6 327 aaPredicted RBP22.63■■□□□ 1.21
AP1S3-205ENST00000415298 LCORLQ8N3X6 602 aa22.63■■□□□ 1.21
AP1S3-205ENST00000415298 SMARCC2Q8TAQ2 1214 aa22.63■■□□□ 1.21
AP1S3-205ENST00000415298 VPS33BQ9H267 617 aa22.63■■□□□ 1.21
AP1S3-205ENST00000415298 INCENPQ9NQS7 918 aa22.63■■□□□ 1.21
AP1S3-205ENST00000415298 MYO1AQ9UBC5 1043 aa22.63■■□□□ 1.21
AP1S3-205ENST00000415298 C15orf41Q9Y2V0 281 aa22.63■■□□□ 1.21
AP1S3-205ENST00000415298 TMEM98Q9Y2Y6 226 aa22.63■■□□□ 1.21
AP1S3-205ENST00000415298 LTBP3Q9NS15 1303 aa22.62■■□□□ 1.21
AP1S3-205ENST00000415298 SSBP05455 408 aaKnown RBP eCLIP22.62■■□□□ 1.21
AP1S3-205ENST00000415298 CXCL9Q07325 125 aa22.62■■□□□ 1.21
AP1S3-205ENST00000415298 AATFQ9NY61 560 aaKnown RBP eCLIP22.62■■□□□ 1.21
AP1S3-205ENST00000415298 TTF2Q9UNY4 1162 aaKnown RBP22.62■■□□□ 1.21
AP1S3-205ENST00000415298 PRKAB2O43741 272 aa22.62■■□□□ 1.21
AP1S3-205ENST00000415298 BUB1BO60566 1050 aaPredicted RBP22.62■■□□□ 1.21
AP1S3-205ENST00000415298 SMIM24O75264 130 aa22.62■■□□□ 1.21
AP1S3-205ENST00000415298 TMEM62Q0P6H9 643 aa22.62■■□□□ 1.21
AP1S3-205ENST00000415298 PRPF4BQ13523 1007 aaKnown RBP22.62■■□□□ 1.21
AP1S3-205ENST00000415298 BLMHQ13867 455 aa22.62■■□□□ 1.21
AP1S3-205ENST00000415298 INF2Q27J81 1249 aa22.62■■□□□ 1.21
AP1S3-205ENST00000415298 LEO1Q8WVC0 666 aaPredicted RBP22.62■■□□□ 1.21
AP1S3-205ENST00000415298 AIDAQ96BJ3 306 aa22.62■■□□□ 1.21
AP1S3-205ENST00000415298 SYNPO2Q9UMS6 1093 aa22.62■■□□□ 1.21
AP1S3-205ENST00000415298 ZNF510Q9Y2H8 683 aa22.62■■□□□ 1.21
AP1S3-205ENST00000415298 A0A1B0GVG6 124 aa22.61■■□□□ 1.21
AP1S3-205ENST00000415298 SH3GL2Q99962 352 aa22.61■■□□□ 1.21
AP1S3-205ENST00000415298 PPP2R2CQ9Y2T4 447 aa22.61■■□□□ 1.21
AP1S3-205ENST00000415298 PCDHAC2Q9Y5I4 1007 aa22.61■■□□□ 1.21
AP1S3-205ENST00000415298 ZC3H4Q9UPT8 1303 aaKnown RBP22.61■■□□□ 1.21
AP1S3-205ENST00000415298 CREB3O43889 395 aa22.61■■□□□ 1.21
AP1S3-205ENST00000415298 NR1I2O75469 434 aa22.61■■□□□ 1.21
AP1S3-205ENST00000415298 HSPD1P10809 573 aaKnown RBP22.61■■□□□ 1.21
AP1S3-205ENST00000415298 MYO1EQ12965 1108 aa22.61■■□□□ 1.21
AP1S3-205ENST00000415298 GPR162Q16538 588 aa22.61■■□□□ 1.21
AP1S3-205ENST00000415298 OGFOD1Q8N543 542 aa22.61■■□□□ 1.21
AP1S3-205ENST00000415298 SMCR8Q8TEV9 937 aaPredicted RBP22.61■■□□□ 1.21
AP1S3-205ENST00000415298 STRBPQ96SI9 672 aaKnown RBP22.61■■□□□ 1.21
AP1S3-205ENST00000415298 NUP58Q9BVL2 599 aa22.61■■□□□ 1.21
AP1S3-205ENST00000415298 ZNF646O15015 1829 aaPredicted RBP22.61■■□□□ 1.21
AP1S3-205ENST00000415298 TSNAXIP1Q2TAA8 658 aa22.6■■□□□ 1.21
AP1S3-205ENST00000415298 Q4G0T1 1027 aa22.6■■□□□ 1.21
AP1S3-205ENST00000415298 RIOK1Q9BRS2 568 aaKnown RBP22.6■■□□□ 1.21
AP1S3-205ENST00000415298 PUF60Q9UHX1 559 aaKnown RBP22.6■■□□□ 1.21
AP1S3-205ENST00000415298 VCAM1P19320 739 aa22.6■■□□□ 1.21
AP1S3-205ENST00000415298 RPL13P26373 211 aaKnown RBP22.6■■□□□ 1.21
AP1S3-205ENST00000415298 WDR93Q6P2C0 686 aa22.6■■□□□ 1.21
AP1S3-205ENST00000415298 SYCP3Q8IZU3 236 aa22.6■■□□□ 1.21
AP1S3-205ENST00000415298 MAP4K1Q92918 833 aa22.6■■□□□ 1.21
AP1S3-205ENST00000415298 SCAND2PQ9GZW5 306 aaPredicted RBP22.6■■□□□ 1.21
AP1S3-205ENST00000415298 HDAC6Q9UBN7 1215 aa22.6■■□□□ 1.21
AP1S3-205ENST00000415298 MYH2Q9UKX2 1941 aa22.59■■□□□ 1.21
AP1S3-205ENST00000415298 F8VZ95 297 aa22.59■■□□□ 1.21
AP1S3-205ENST00000415298 ATP4AP20648 1035 aa22.59■■□□□ 1.21
AP1S3-205ENST00000415298 CCDC38Q502W7 563 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms