RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 PORCNQ9H237 461 aa23.49■■□□□ 1.35
VSX1-203ENST00000409285 MTMR6Q9Y217 621 aa23.49■■□□□ 1.35
VSX1-203ENST00000409285 TCHHQ07283 1943 aa23.49■■□□□ 1.35
VSX1-203ENST00000409285 MEIS2O14770 477 aa23.49■■□□□ 1.35
VSX1-203ENST00000409285 MAPK4P31152 587 aa23.49■■□□□ 1.35
VSX1-203ENST00000409285 KRT2P35908 639 aa23.49■■□□□ 1.35
VSX1-203ENST00000409285 MCTP2Q6DN12 878 aa23.49■■□□□ 1.35
VSX1-203ENST00000409285 NCAPG2Q86XI2 1143 aa23.49■■□□□ 1.35
VSX1-203ENST00000409285 BLIDQ8IZY5 108 aa23.49■■□□□ 1.35
VSX1-203ENST00000409285 REXO1Q8N1G1 1221 aaKnown RBP23.49■■□□□ 1.35
VSX1-203ENST00000409285 FOXP1Q9H334 677 aaPredicted RBP23.49■■□□□ 1.35
VSX1-203ENST00000409285 TRPA1O75762 1119 aa23.48■■□□□ 1.35
VSX1-203ENST00000409285 U2AF2P26368 475 aaKnown RBP eCLIP23.48■■□□□ 1.35
VSX1-203ENST00000409285 FOSBP53539 338 aa23.48■■□□□ 1.35
VSX1-203ENST00000409285 DIS3L2Q8IYB7 885 aaKnown RBP23.48■■□□□ 1.35
VSX1-203ENST00000409285 ABRAQ8N0Z2 381 aa23.48■■□□□ 1.35
VSX1-203ENST00000409285 R3HDMLQ9H3Y0 253 aa23.48■■□□□ 1.35
VSX1-203ENST00000409285 A1CFQ9NQ94 594 aaKnown RBP23.48■■□□□ 1.35
VSX1-203ENST00000409285 MCM3APO60318 1980 aa23.47■■□□□ 1.35
VSX1-203ENST00000409285 VPS37CA5D8V6 355 aaPredicted RBP23.47■■□□□ 1.35
VSX1-203ENST00000409285 STRNO43815 780 aa23.47■■□□□ 1.35
VSX1-203ENST00000409285 CTCFP49711 727 aaPredicted RBP23.47■■□□□ 1.35
VSX1-203ENST00000409285 GUCY1B3Q02153 619 aa23.47■■□□□ 1.35
VSX1-203ENST00000409285 AP3B2Q13367 1082 aa23.47■■□□□ 1.35
VSX1-203ENST00000409285 TNFRSF25Q93038 417 aa23.47■■□□□ 1.35
VSX1-203ENST00000409285 KIAA1217Q5T5P2 1943 aa23.47■■□□□ 1.35
VSX1-203ENST00000409285 GCOM1H8Y6P7 765 aaPredicted RBP23.46■■□□□ 1.35
VSX1-203ENST00000409285 BRD1O95696 1058 aa23.46■■□□□ 1.35
VSX1-203ENST00000409285 POLR2MP0CAP2 368 aa23.46■■□□□ 1.35
VSX1-203ENST00000409285 NUCB2P80303 420 aa23.46■■□□□ 1.35
VSX1-203ENST00000409285 RNF207Q6ZRF8 634 aa23.46■■□□□ 1.35
VSX1-203ENST00000409285 EFCC1Q9HA90 598 aa23.46■■□□□ 1.35
VSX1-203ENST00000409285 CYP39A1Q9NYL5 469 aa23.46■■□□□ 1.35
VSX1-203ENST00000409285 TBC1D8O95759 1140 aa23.45■■□□□ 1.34
VSX1-203ENST00000409285 CFBP00751 764 aa23.45■■□□□ 1.34
VSX1-203ENST00000409285 FOSP01100 380 aaPredicted RBP23.45■■□□□ 1.34
VSX1-203ENST00000409285 RPS6P62753 249 aaKnown RBP23.45■■□□□ 1.34
VSX1-203ENST00000409285 PKP1Q13835 747 aa23.45■■□□□ 1.34
VSX1-203ENST00000409285 USP17L6PQ6QN14 398 aa23.45■■□□□ 1.34
VSX1-203ENST00000409285 TSKSQ9UJT2 592 aa23.45■■□□□ 1.34
VSX1-203ENST00000409285 BTBD18B2RXH4 712 aa23.44■■□□□ 1.34
VSX1-203ENST00000409285 ZSCAN22P10073 491 aaPredicted RBP23.44■■□□□ 1.34
VSX1-203ENST00000409285 FCER1AP12319 257 aa23.44■■□□□ 1.34
VSX1-203ENST00000409285 GPR142Q7Z601 462 aa23.44■■□□□ 1.34
VSX1-203ENST00000409285 CCAR1Q8IX12 1150 aaKnown RBP23.44■■□□□ 1.34
VSX1-203ENST00000409285 OXER1Q8TDS5 423 aa23.44■■□□□ 1.34
VSX1-203ENST00000409285 TBC1D5Q92609 795 aa23.44■■□□□ 1.34
VSX1-203ENST00000409285 PCDHA6Q9UN73 950 aa23.44■■□□□ 1.34
VSX1-203ENST00000409285 PCDHA8Q9Y5H6 950 aa23.44■■□□□ 1.34
VSX1-203ENST00000409285 FRMPD4Q14CM0 1322 aa23.44■■□□□ 1.34
VSX1-203ENST00000409285 DNAJC25-GNG10A0A024R161 153 aa23.43■■□□□ 1.34
VSX1-203ENST00000409285 ADAMTS3O15072 1205 aa23.43■■□□□ 1.34
VSX1-203ENST00000409285 HSPA8P11142 646 aaKnown RBP23.43■■□□□ 1.34
VSX1-203ENST00000409285 LACTBP83111 547 aaPredicted RBP23.43■■□□□ 1.34
VSX1-203ENST00000409285 GRB14Q14449 540 aa23.43■■□□□ 1.34
VSX1-203ENST00000409285 UBE2SQ16763 222 aa23.43■■□□□ 1.34
VSX1-203ENST00000409285 NSMFQ6X4W1 530 aa23.43■■□□□ 1.34
VSX1-203ENST00000409285 SLC30A10Q6XR72 485 aa23.43■■□□□ 1.34
VSX1-203ENST00000409285 NOSTRINQ8IVI9 506 aa23.43■■□□□ 1.34
VSX1-203ENST00000409285 ANKRD35Q8N283 1001 aa23.43■■□□□ 1.34
VSX1-203ENST00000409285 SYTL5Q8TDW5 730 aaPredicted RBP23.43■■□□□ 1.34
VSX1-203ENST00000409285 ZSCAN16Q9H4T2 348 aaPredicted RBP23.43■■□□□ 1.34
VSX1-203ENST00000409285 HOXA13P31271 388 aaPredicted RBP23.43■■□□□ 1.34
VSX1-203ENST00000409285 SP3Q02447 781 aa23.43■■□□□ 1.34
VSX1-203ENST00000409285 NR5A1Q13285 461 aa23.43■■□□□ 1.34
VSX1-203ENST00000409285 BAATQ14032 418 aaPredicted RBP23.43■■□□□ 1.34
VSX1-203ENST00000409285 KCTD2Q14681 263 aa23.43■■□□□ 1.34
VSX1-203ENST00000409285 KRT25Q7Z3Z0 450 aa23.43■■□□□ 1.34
VSX1-203ENST00000409285 BRAPQ7Z569 592 aa23.43■■□□□ 1.34
VSX1-203ENST00000409285 PLEKHH3Q7Z736 793 aa23.43■■□□□ 1.34
VSX1-203ENST00000409285 MMP19Q99542 508 aa23.43■■□□□ 1.34
VSX1-203ENST00000409285 ZDHHC9Q9Y397 364 aa23.43■■□□□ 1.34
VSX1-203ENST00000409285 IVNS1ABPQ9Y6Y0 642 aa23.43■■□□□ 1.34
VSX1-203ENST00000409285 KIF28PB7ZC32 967 aa23.42■■□□□ 1.34
VSX1-203ENST00000409285 PTPREP23469 700 aa23.42■■□□□ 1.34
VSX1-203ENST00000409285 COL20A1Q9P218 1284 aa23.42■■□□□ 1.34
VSX1-203ENST00000409285 BIN2Q9UBW5 565 aaPredicted RBP23.42■■□□□ 1.34
VSX1-203ENST00000409285 SLC15A5A6NIM6 579 aa23.41■■□□□ 1.34
VSX1-203ENST00000409285 SPDYE3A6NKU9 549 aa23.41■■□□□ 1.34
VSX1-203ENST00000409285 GPR25O00155 361 aa23.41■■□□□ 1.34
VSX1-203ENST00000409285 F13A1P00488 732 aa23.41■■□□□ 1.34
VSX1-203ENST00000409285 LBX1P52954 281 aa23.41■■□□□ 1.34
VSX1-203ENST00000409285 RESTQ13127 1097 aa23.41■■□□□ 1.34
VSX1-203ENST00000409285 GNL2Q13823 731 aaKnown RBP23.41■■□□□ 1.34
VSX1-203ENST00000409285 WDR78Q5VTH9 848 aa23.41■■□□□ 1.34
VSX1-203ENST00000409285 MCTP1Q6DN14 999 aa23.41■■□□□ 1.34
VSX1-203ENST00000409285 FAM133AQ8N9E0 248 aa23.41■■□□□ 1.34
VSX1-203ENST00000409285 DNERQ8NFT8 737 aa23.41■■□□□ 1.34
VSX1-203ENST00000409285 RASGRP4Q8TDF6 673 aa23.41■■□□□ 1.34
VSX1-203ENST00000409285 CHMP5Q9NZZ3 219 aa23.41■■□□□ 1.34
VSX1-203ENST00000409285 RPTORQ8N122 1335 aa23.41■■□□□ 1.34
VSX1-203ENST00000409285 LOC102724159A0A0B4J2E5 919 aa23.4■■□□□ 1.34
VSX1-203ENST00000409285 PWP2Q15269 919 aaKnown RBP23.4■■□□□ 1.34
VSX1-203ENST00000409285 CRYGNQ8WXF5 182 aa23.4■■□□□ 1.34
VSX1-203ENST00000409285 ANO3Q9BYT9 981 aa23.4■■□□□ 1.34
VSX1-203ENST00000409285 TMEM260Q9NX78 707 aa23.4■■□□□ 1.34
VSX1-203ENST00000409285 HTTP42858 3142 aa23.4■■□□□ 1.34
VSX1-203ENST00000409285 CCDC194A0A1B0GVG4 234 aa23.39■■□□□ 1.34
VSX1-203ENST00000409285 SREBF1P36956 1147 aa23.39■■□□□ 1.34
VSX1-203ENST00000409285 FCGRTP55899 365 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms