RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 SOWAHBA6NEL2 793 aa14.97□□□□□ -0.01
SNORD88B-201ENST00000408454 B4E1Z4 1266 aa14.97□□□□□ -0.01
SNORD88B-201ENST00000408454 DYNC1LI2O43237 492 aaPredicted RBP14.97□□□□□ -0.01
SNORD88B-201ENST00000408454 KIF5BP33176 963 aa14.97□□□□□ -0.01
SNORD88B-201ENST00000408454 PTPN11Q06124 597 aaPredicted RBP14.97□□□□□ -0.01
SNORD88B-201ENST00000408454 CDC37Q16543 378 aaPredicted RBP14.97□□□□□ -0.01
SNORD88B-201ENST00000408454 RNF20Q5VTR2 975 aa14.97□□□□□ -0.01
SNORD88B-201ENST00000408454 CCSAPQ6IQ19 270 aaPredicted RBP14.97□□□□□ -0.01
SNORD88B-201ENST00000408454 MFSD5Q6N075 450 aa14.97□□□□□ -0.01
SNORD88B-201ENST00000408454 WDR11Q9BZH6 1224 aa14.97□□□□□ -0.01
SNORD88B-201ENST00000408454 MKI67P46013 3256 aaKnown RBP14.97□□□□□ -0.01
SNORD88B-201ENST00000408454 NEDD4P46934 1319 aa14.96□□□□□ -0.01
SNORD88B-201ENST00000408454 GNAQP50148 359 aa14.96□□□□□ -0.01
SNORD88B-201ENST00000408454 RPS6P62753 249 aaKnown RBP14.96□□□□□ -0.01
SNORD88B-201ENST00000408454 STXBP2Q15833 593 aa14.96□□□□□ -0.01
SNORD88B-201ENST00000408454 MUM1L1Q5H9M0 696 aa14.96□□□□□ -0.01
SNORD88B-201ENST00000408454 CATIPQ7Z7H3 387 aa14.96□□□□□ -0.01
SNORD88B-201ENST00000408454 ENAHQ8N8S7 591 aaPredicted RBP14.96□□□□□ -0.01
SNORD88B-201ENST00000408454 LZTS2Q9BRK4 669 aa14.96□□□□□ -0.01
SNORD88B-201ENST00000408454 ZSWIM5Q9P217 1185 aa14.96□□□□□ -0.01
SNORD88B-201ENST00000408454 GNEQ9Y223 722 aaKnown RBP14.96□□□□□ -0.01
SNORD88B-201ENST00000408454 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.95□□□□□ -0.02
SNORD88B-201ENST00000408454 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.95□□□□□ -0.02
SNORD88B-201ENST00000408454 PARNO95453 639 aaKnown RBP14.95□□□□□ -0.02
SNORD88B-201ENST00000408454 CDK7P50613 346 aa14.95□□□□□ -0.02
SNORD88B-201ENST00000408454 FAAP100Q0VG06 881 aa14.95□□□□□ -0.02
SNORD88B-201ENST00000408454 ITGA7Q13683 1181 aa14.95□□□□□ -0.02
SNORD88B-201ENST00000408454 WTAPQ15007 396 aa14.95□□□□□ -0.02
SNORD88B-201ENST00000408454 USH1GQ495M9 461 aa14.95□□□□□ -0.02
SNORD88B-201ENST00000408454 TTBK2Q6IQ55 1244 aa14.95□□□□□ -0.02
SNORD88B-201ENST00000408454 FBXO16Q8IX29 292 aaPredicted RBP14.95□□□□□ -0.02
SNORD88B-201ENST00000408454 OR6J1Q8NGC5 347 aa14.95□□□□□ -0.02
SNORD88B-201ENST00000408454 LRCH3Q96II8 777 aa14.95□□□□□ -0.02
SNORD88B-201ENST00000408454 MTG1Q9BT17 334 aaPredicted RBP14.95□□□□□ -0.02
SNORD88B-201ENST00000408454 KATNAL1Q9BW62 490 aa14.95□□□□□ -0.02
SNORD88B-201ENST00000408454 KATNBL1Q9H079 304 aa14.95□□□□□ -0.02
SNORD88B-201ENST00000408454 INCENPQ9NQS7 918 aa14.95□□□□□ -0.02
SNORD88B-201ENST00000408454 NOD1Q9Y239 953 aa14.95□□□□□ -0.02
SNORD88B-201ENST00000408454 RBM47A0AV96 593 aaKnown RBP14.94□□□□□ -0.02
SNORD88B-201ENST00000408454 NFIBO00712 420 aa14.94□□□□□ -0.02
SNORD88B-201ENST00000408454 IFIT3O14879 490 aaKnown RBP14.94□□□□□ -0.02
SNORD88B-201ENST00000408454 STAM2O75886 525 aa14.94□□□□□ -0.02
SNORD88B-201ENST00000408454 CALM1P0DP23 149 aa14.94□□□□□ -0.02
SNORD88B-201ENST00000408454 CALM2P0DP24 149 aa14.94□□□□□ -0.02
SNORD88B-201ENST00000408454 CALM3P0DP25 149 aa14.94□□□□□ -0.02
SNORD88B-201ENST00000408454 ACTN1P12814 892 aa14.94□□□□□ -0.02
SNORD88B-201ENST00000408454 RFC2P35250 354 aa14.94□□□□□ -0.02
SNORD88B-201ENST00000408454 ARHGEF16Q5VV41 709 aa14.94□□□□□ -0.02
SNORD88B-201ENST00000408454 TEX2Q8IWB9 1127 aa14.94□□□□□ -0.02
SNORD88B-201ENST00000408454 ADGRF4Q8IZF3 695 aa14.94□□□□□ -0.02
SNORD88B-201ENST00000408454 SLC17A8Q8NDX2 589 aa14.94□□□□□ -0.02
SNORD88B-201ENST00000408454 CTCFLQ8NI51 663 aaPredicted RBP14.94□□□□□ -0.02
SNORD88B-201ENST00000408454 CHMP4CQ96CF2 233 aa14.94□□□□□ -0.02
SNORD88B-201ENST00000408454 FGD4Q96M96 766 aa14.94□□□□□ -0.02
SNORD88B-201ENST00000408454 MAP3K14Q99558 947 aa14.94□□□□□ -0.02
SNORD88B-201ENST00000408454 ZKSCAN3Q9BRR0 538 aa14.94□□□□□ -0.02
SNORD88B-201ENST00000408454 HIPK3Q9H422 1215 aa14.94□□□□□ -0.02
SNORD88B-201ENST00000408454 TBX21Q9UL17 535 aa14.94□□□□□ -0.02
SNORD88B-201ENST00000408454 TRIM43BA6NCK2 446 aa14.93□□□□□ -0.02
SNORD88B-201ENST00000408454 KLRF2D3W0D1 207 aa14.93□□□□□ -0.02
SNORD88B-201ENST00000408454 EIF3JO75822 258 aaKnown RBP14.93□□□□□ -0.02
SNORD88B-201ENST00000408454 GH1P01241 217 aa14.93□□□□□ -0.02
SNORD88B-201ENST00000408454 TXNP10599 105 aaKnown RBP14.93□□□□□ -0.02
SNORD88B-201ENST00000408454 SMPD1P17405 629 aa14.93□□□□□ -0.02
SNORD88B-201ENST00000408454 CASTP20810 708 aaKnown RBP14.93□□□□□ -0.02
SNORD88B-201ENST00000408454 EDNRBP24530 442 aa14.93□□□□□ -0.02
SNORD88B-201ENST00000408454 RAB30Q15771 203 aa14.93□□□□□ -0.02
SNORD88B-201ENST00000408454 GNPTABQ3T906 1256 aa14.93□□□□□ -0.02
SNORD88B-201ENST00000408454 TAPT1Q6NXT6 567 aa14.93□□□□□ -0.02
SNORD88B-201ENST00000408454 NFRKBQ6P4R8 1299 aa14.93□□□□□ -0.02
SNORD88B-201ENST00000408454 CXCL17Q6UXB2 119 aa14.93□□□□□ -0.02
SNORD88B-201ENST00000408454 EEPD1Q7L9B9 569 aa14.93□□□□□ -0.02
SNORD88B-201ENST00000408454 FAM126BQ8IXS8 530 aa14.93□□□□□ -0.02
SNORD88B-201ENST00000408454 RETREG2Q8NC44 543 aa14.93□□□□□ -0.02
SNORD88B-201ENST00000408454 TRIM43Q96BQ3 446 aaPredicted RBP14.93□□□□□ -0.02
SNORD88B-201ENST00000408454 RMDN3Q96TC7 470 aa14.93□□□□□ -0.02
SNORD88B-201ENST00000408454 MTMR10Q9NXD2 777 aa14.93□□□□□ -0.02
SNORD88B-201ENST00000408454 SEC63Q9UGP8 760 aaKnown RBP14.93□□□□□ -0.02
SNORD88B-201ENST00000408454 SOX1O00570 391 aaPredicted RBP14.92□□□□□ -0.02
SNORD88B-201ENST00000408454 ZBTB5O15062 677 aa14.92□□□□□ -0.02
SNORD88B-201ENST00000408454 CHMLP26374 656 aa14.92□□□□□ -0.02
SNORD88B-201ENST00000408454 BFSP2Q13515 415 aa14.92□□□□□ -0.02
SNORD88B-201ENST00000408454 SHHQ15465 462 aa14.92□□□□□ -0.02
SNORD88B-201ENST00000408454 SYNE3Q6ZMZ3 975 aa14.92□□□□□ -0.02
SNORD88B-201ENST00000408454 SLC43A3Q8NBI5 491 aa14.92□□□□□ -0.02
SNORD88B-201ENST00000408454 CLEC4DQ8WXI8 215 aa14.92□□□□□ -0.02
SNORD88B-201ENST00000408454 CUL5Q93034 780 aa14.92□□□□□ -0.02
SNORD88B-201ENST00000408454 LENG1Q96BZ8 264 aaPredicted RBP14.92□□□□□ -0.02
SNORD88B-201ENST00000408454 TMEM87BQ96K49 555 aa14.92□□□□□ -0.02
SNORD88B-201ENST00000408454 MSRAQ9UJ68 235 aa14.92□□□□□ -0.02
SNORD88B-201ENST00000408454 LTBP2Q14767 1821 aa14.92□□□□□ -0.02
SNORD88B-201ENST00000408454 SGSM2O43147 1006 aa14.91□□□□□ -0.02
SNORD88B-201ENST00000408454 DDAH1O94760 285 aa14.91□□□□□ -0.02
SNORD88B-201ENST00000408454 GOLGA8HP0CJ92 632 aa14.91□□□□□ -0.02
SNORD88B-201ENST00000408454 TGFB3P10600 412 aa14.91□□□□□ -0.02
SNORD88B-201ENST00000408454 SMARCA1P28370 1054 aa14.91□□□□□ -0.02
SNORD88B-201ENST00000408454 MCM5P33992 734 aa14.91□□□□□ -0.02
SNORD88B-201ENST00000408454 SNAP25P60880 206 aa14.91□□□□□ -0.02
SNORD88B-201ENST00000408454 QRICH1Q2TAL8 776 aa14.91□□□□□ -0.02
SNORD88B-201ENST00000408454 TMEM67Q5HYA8 995 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms