RNA–Protein interactions for RNA: ENST00000399126.1

COL25A1-201, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-201ENST00000399126 GJA10Q969M2 543 aa17.14■□□□□ 0.33
COL25A1-201ENST00000399126 PLIN2Q99541 437 aa17.14■□□□□ 0.33
COL25A1-201ENST00000399126 ZNF341Q9BYN7 854 aa17.14■□□□□ 0.33
COL25A1-201ENST00000399126 VCPKMTQ9H867 229 aa17.14■□□□□ 0.33
COL25A1-201ENST00000399126 GOPCQ9HD26 462 aa17.14■□□□□ 0.33
COL25A1-201ENST00000399126 ASNSP08243 561 aa17.13■□□□□ 0.33
COL25A1-201ENST00000399126 SLFN14P0C7P3 912 aa17.13■□□□□ 0.33
COL25A1-201ENST00000399126 STAT2P52630 851 aa17.13■□□□□ 0.33
COL25A1-201ENST00000399126 HIRAP54198 1017 aaPredicted RBP17.13■□□□□ 0.33
COL25A1-201ENST00000399126 BTNL9Q6UXG8 535 aa17.13■□□□□ 0.33
COL25A1-201ENST00000399126 PAGE5Q96GU1 130 aa17.13■□□□□ 0.33
COL25A1-201ENST00000399126 GPRC5DQ9NZD1 345 aa17.13■□□□□ 0.33
COL25A1-201ENST00000399126 MAN1B1Q9UKM7 699 aa17.13■□□□□ 0.33
COL25A1-201ENST00000399126 H7C1D1 291 aa17.13■□□□□ 0.33
COL25A1-201ENST00000399126 OR52Z1P0C646 297 aa17.13■□□□□ 0.33
COL25A1-201ENST00000399126 DLK2Q6UY11 383 aa17.13■□□□□ 0.33
COL25A1-201ENST00000399126 LRRC15Q8TF66 581 aa17.13■□□□□ 0.33
COL25A1-201ENST00000399126 MTRQ99707 1265 aa17.13■□□□□ 0.33
COL25A1-201ENST00000399126 BECN2A8MW95 431 aa17.12■□□□□ 0.33
COL25A1-201ENST00000399126 MEIS2O14770 477 aa17.12■□□□□ 0.33
COL25A1-201ENST00000399126 OPLAHO14841 1288 aa17.12■□□□□ 0.33
COL25A1-201ENST00000399126 CAVIN2O95810 425 aa17.12■□□□□ 0.33
COL25A1-201ENST00000399126 YBX3P16989 372 aaKnown RBP eCLIP17.12■□□□□ 0.33
COL25A1-201ENST00000399126 LONP1P36776 959 aaKnown RBP17.12■□□□□ 0.33
COL25A1-201ENST00000399126 MRPL12P52815 198 aaKnown RBP17.12■□□□□ 0.33
COL25A1-201ENST00000399126 FBXO11Q86XK2 927 aa17.12■□□□□ 0.33
COL25A1-201ENST00000399126 KIFC2Q96AC6 838 aa17.12■□□□□ 0.33
COL25A1-201ENST00000399126 SYT17Q9BSW7 474 aa17.12■□□□□ 0.33
COL25A1-201ENST00000399126 AMNQ9BXJ7 453 aa17.12■□□□□ 0.33
COL25A1-201ENST00000399126 DDNO94850 711 aaPredicted RBP17.12■□□□□ 0.33
COL25A1-201ENST00000399126 CCDC174Q6PII3 467 aa17.12■□□□□ 0.33
COL25A1-201ENST00000399126 GGA3Q9NZ52 723 aa17.12■□□□□ 0.33
COL25A1-201ENST00000399126 GOLGA6L19H0YKK7 550 aa17.11■□□□□ 0.33
COL25A1-201ENST00000399126 TECP42680 631 aa17.11■□□□□ 0.33
COL25A1-201ENST00000399126 PDXDC2PQ6P474 469 aa17.11■□□□□ 0.33
COL25A1-201ENST00000399126 SH3RF1Q7Z6J0 888 aa17.11■□□□□ 0.33
COL25A1-201ENST00000399126 GPC2Q8N158 579 aa17.11■□□□□ 0.33
COL25A1-201ENST00000399126 FEZ1Q99689 392 aa17.11■□□□□ 0.33
COL25A1-201ENST00000399126 CCDC94Q9BW85 323 aaPredicted RBP17.11■□□□□ 0.33
COL25A1-201ENST00000399126 BLZF1Q9H2G9 400 aa17.11■□□□□ 0.33
COL25A1-201ENST00000399126 TXKP42681 527 aa17.11■□□□□ 0.33
COL25A1-201ENST00000399126 SARSP49591 514 aaKnown RBP17.11■□□□□ 0.33
COL25A1-201ENST00000399126 SPC24Q8NBT2 197 aa17.11■□□□□ 0.33
COL25A1-201ENST00000399126 SYNPO2Q9UMS6 1093 aa17.11■□□□□ 0.33
COL25A1-201ENST00000399126 HOXA13P31271 388 aaPredicted RBP17.1■□□□□ 0.33
COL25A1-201ENST00000399126 MMP14P50281 582 aa17.1■□□□□ 0.33
COL25A1-201ENST00000399126 NAALADL2Q58DX5 795 aa17.1■□□□□ 0.33
COL25A1-201ENST00000399126 ELOA2Q8IYF1 753 aaPredicted RBP17.1■□□□□ 0.33
COL25A1-201ENST00000399126 SMARCE1Q969G3 411 aa17.1■□□□□ 0.33
COL25A1-201ENST00000399126 ZKSCAN4Q969J2 545 aaPredicted RBP17.1■□□□□ 0.33
COL25A1-201ENST00000399126 NAT10Q9H0A0 1025 aaKnown RBP17.1■□□□□ 0.33
COL25A1-201ENST00000399126 CLGNO14967 610 aa17.1■□□□□ 0.33
COL25A1-201ENST00000399126 PRPHP41219 470 aa17.1■□□□□ 0.33
COL25A1-201ENST00000399126 IRX3P78415 501 aaPredicted RBP17.1■□□□□ 0.33
COL25A1-201ENST00000399126 NCAPHQ15003 741 aa17.1■□□□□ 0.33
COL25A1-201ENST00000399126 NT5DC1Q5TFE4 455 aa17.1■□□□□ 0.33
COL25A1-201ENST00000399126 MTMR9Q96QG7 549 aa17.1■□□□□ 0.33
COL25A1-201ENST00000399126 TRIM5Q9C035 493 aa17.1■□□□□ 0.33
COL25A1-201ENST00000399126 LAD1O00515 517 aa17.09■□□□□ 0.33
COL25A1-201ENST00000399126 CALCRLQ16602 461 aa17.09■□□□□ 0.33
COL25A1-201ENST00000399126 IQUBQ8NA54 791 aa17.09■□□□□ 0.33
COL25A1-201ENST00000399126 SPATA20Q8TB22 786 aa17.09■□□□□ 0.33
COL25A1-201ENST00000399126 TBC1D5Q92609 795 aa17.09■□□□□ 0.33
COL25A1-201ENST00000399126 ANO3Q9BYT9 981 aa17.09■□□□□ 0.33
COL25A1-201ENST00000399126 DISC1Q9NRI5 854 aa17.09■□□□□ 0.33
COL25A1-201ENST00000399126 RNF181Q9P0P0 153 aa17.09■□□□□ 0.33
COL25A1-201ENST00000399126 HOOK1Q9UJC3 728 aaKnown RBP17.09■□□□□ 0.33
COL25A1-201ENST00000399126 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.09■□□□□ 0.33
COL25A1-201ENST00000399126 UBA7P41226 1012 aa17.08■□□□□ 0.33
COL25A1-201ENST00000399126 ZNF75DP51815 510 aa17.08■□□□□ 0.33
COL25A1-201ENST00000399126 DPYDQ12882 1025 aa17.08■□□□□ 0.33
COL25A1-201ENST00000399126 CUL4BQ13620 913 aa17.08■□□□□ 0.33
COL25A1-201ENST00000399126 KANK3Q6NY19 840 aa17.08■□□□□ 0.33
COL25A1-201ENST00000399126 RASSF8Q8NHQ8 419 aa17.08■□□□□ 0.33
COL25A1-201ENST00000399126 POTEMA6NI47 508 aa17.08■□□□□ 0.32
COL25A1-201ENST00000399126 MORC3Q14149 939 aa17.08■□□□□ 0.32
COL25A1-201ENST00000399126 PLA2G4DQ86XP0 818 aa17.08■□□□□ 0.32
COL25A1-201ENST00000399126 SMYD4Q8IYR2 804 aaPredicted RBP17.08■□□□□ 0.32
COL25A1-201ENST00000399126 HSD3B7Q9H2F3 369 aa17.08■□□□□ 0.32
COL25A1-201ENST00000399126 CTNND1O60716 968 aaKnown RBP17.07■□□□□ 0.32
COL25A1-201ENST00000399126 STAT6P42226 847 aa17.07■□□□□ 0.32
COL25A1-201ENST00000399126 PRKG1Q13976 671 aa17.07■□□□□ 0.32
COL25A1-201ENST00000399126 DNTTIP2Q5QJE6 756 aaKnown RBP17.07■□□□□ 0.32
COL25A1-201ENST00000399126 BPIFA3Q9BQP9 254 aa17.07■□□□□ 0.32
COL25A1-201ENST00000399126 MMTAG2Q9BU76 263 aaKnown RBP17.07■□□□□ 0.32
COL25A1-201ENST00000399126 SH2D4AQ9H788 454 aa17.07■□□□□ 0.32
COL25A1-201ENST00000399126 DDX25Q9UHL0 483 aaKnown RBP17.07■□□□□ 0.32
COL25A1-201ENST00000399126 SSC5DA1L4H1 1573 aa17.07■□□□□ 0.32
COL25A1-201ENST00000399126 DYNC1I1O14576 645 aa17.07■□□□□ 0.32
COL25A1-201ENST00000399126 TXLNAP40222 546 aa17.07■□□□□ 0.32
COL25A1-201ENST00000399126 FMR1Q06787 632 aaKnown RBP eCLIP17.07■□□□□ 0.32
COL25A1-201ENST00000399126 MTMR2Q13614 643 aa17.07■□□□□ 0.32
COL25A1-201ENST00000399126 HAS1Q92839 578 aa17.07■□□□□ 0.32
COL25A1-201ENST00000399126 WRNIP1Q96S55 665 aa17.07■□□□□ 0.32
COL25A1-201ENST00000399126 DOCK1Q14185 1865 aa17.07■□□□□ 0.32
COL25A1-201ENST00000399126 CABP7Q86V35 215 aa17.06■□□□□ 0.32
COL25A1-201ENST00000399126 RANBP17Q9H2T7 1088 aaKnown RBP17.06■□□□□ 0.32
COL25A1-201ENST00000399126 ATP1A3P13637 1013 aa17.06■□□□□ 0.32
COL25A1-201ENST00000399126 PLCG1P19174 1290 aa17.06■□□□□ 0.32
COL25A1-201ENST00000399126 LMOD1P29536 600 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms