RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 RNASELQ05823 741 aaKnown RBP15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 ITPK1Q13572 414 aa15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 PTPROQ16827 1216 aa15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 CEP85LQ5SZL2 805 aa15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 RSPH3Q86UC2 560 aa15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 CNOT7Q9UIV1 285 aaKnown RBP15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 DDAH1O94760 285 aa15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 ASNSP08243 561 aa15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 FYB2Q5VWT5 728 aa15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 TYW1BQ6NUM6 668 aa15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 ARFGAP2Q8N6H7 521 aa15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 NLRP12P59046 1061 aa15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 GPATCH4Q5T3I0 446 aaKnown RBP15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 RPUSD2Q8IZ73 545 aaKnown RBP15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 MED23Q9ULK4 1368 aa15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 ASPRV1Q53RT3 343 aa15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 CCDC105Q8IYK2 499 aa15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 PARP2Q9UGN5 583 aa15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 SEPT9Q9UHD8 586 aaPredicted RBP15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 TNKSO95271 1327 aa15.67■□□□□ 0.1
PCDHA11-201ENST00000398640 BMP3P12645 472 aa15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 ATF7P17544 494 aaPredicted RBP15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 LMNB1P20700 586 aa15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 PLA2G4DQ86XP0 818 aa15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 STMN2Q93045 179 aa15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 TEKT3Q9BXF9 490 aa15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 SEPT10Q9P0V9 454 aa15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 STAT2P52630 851 aa15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 PTPN12Q05209 780 aaKnown RBP15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 SFMBT2Q5VUG0 894 aa15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 PNMA8AQ86V59 439 aaPredicted RBP15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 CCDC89Q8N998 374 aa15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 ISCA1Q9BUE6 129 aa15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 ZHX2Q9Y6X8 837 aa15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 RICTORQ6R327 1708 aa15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 RRAGAQ7L523 313 aa15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 COL23A1Q86Y22 540 aaPredicted RBP15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 NUP58Q9BVL2 599 aa15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 FAM184BQ9ULE4 1060 aa15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 ITSN1Q15811 1721 aa15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 ADD2P35612 726 aa15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 CACNB3P54284 484 aa15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 LSM14BQ9BX40 385 aaKnown RBP15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 HSPD1P10809 573 aaKnown RBP15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 GKAP1Q5VSY0 366 aaPredicted RBP15.66■□□□□ 0.1
PCDHA11-201ENST00000398640 CAMTA2O94983 1202 aa15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 MAGEA1P43355 309 aa15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 ZNF157P51786 506 aaPredicted RBP15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 MTX1Q13505 466 aa15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 SLF1Q9BQI6 1058 aa15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 SERTAD1Q9UHV2 236 aa15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 NFE2L3Q9Y4A8 694 aa15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 DLATP10515 647 aaKnown RBP15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 TGFB2P61812 414 aa15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 KCTD1Q719H9 257 aa15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 RASGRF1Q13972 1273 aa15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 KRT81Q14533 505 aa15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 MLKLQ8NB16 471 aa15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 KCNG1Q9UIX4 513 aa15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 SLIT1O75093 1534 aa15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 COBLO75128 1261 aa15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 TBC1D8O95759 1140 aa15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 ZNF131P52739 623 aa15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 FAM160B2Q86V87 743 aa15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 AMNQ9BXJ7 453 aa15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 TLR7Q9NYK1 1049 aaKnown RBP15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 DDX25Q9UHL0 483 aaKnown RBP15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 ABCB4P21439 1286 aa15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 TSTA3Q13630 321 aaPredicted RBP15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 SND1Q7KZF4 910 aaKnown RBP eCLIP15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 MICAL1Q8TDZ2 1067 aa15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 OTUD5Q96G74 571 aa15.65■□□□□ 0.1
PCDHA11-201ENST00000398640 A0A0D9SFI3 127 aa15.64■□□□□ 0.09
PCDHA11-201ENST00000398640 USP17L5A8MUK1 530 aa15.64■□□□□ 0.09
PCDHA11-201ENST00000398640 YWHAEP62258 255 aaKnown RBP15.64■□□□□ 0.09
PCDHA11-201ENST00000398640 TTC30AQ86WT1 665 aa15.64■□□□□ 0.09
PCDHA11-201ENST00000398640 NRBP2Q9NSY0 501 aa15.64■□□□□ 0.09
PCDHA11-201ENST00000398640 NUB1Q9Y5A7 615 aa15.64■□□□□ 0.09
PCDHA11-201ENST00000398640 TACC3Q9Y6A5 838 aa15.64■□□□□ 0.09
PCDHA11-201ENST00000398640 GABPB2Q8TAK5 448 aaPredicted RBP15.64■□□□□ 0.09
PCDHA11-201ENST00000398640 TMEM106CQ9BVX2 250 aa15.64■□□□□ 0.09
PCDHA11-201ENST00000398640 UBN2Q6ZU65 1347 aa15.64■□□□□ 0.09
PCDHA11-201ENST00000398640 CCND2P30279 289 aa15.64■□□□□ 0.09
PCDHA11-201ENST00000398640 U2AF1L4Q8WU68 220 aaKnown RBP15.64■□□□□ 0.09
PCDHA11-201ENST00000398640 USP42Q9H9J4 1324 aaKnown RBP15.64■□□□□ 0.09
PCDHA11-201ENST00000398640 PEX26Q7Z412 305 aa15.64■□□□□ 0.09
PCDHA11-201ENST00000398640 SDCCAG8Q86SQ7 713 aaPredicted RBP15.64■□□□□ 0.09
PCDHA11-201ENST00000398640 LCORLQ8N3X6 602 aa15.64■□□□□ 0.09
PCDHA11-201ENST00000398640 BCORL1Q5H9F3 1711 aa15.64■□□□□ 0.09
PCDHA11-201ENST00000398640 C9orf131Q5VYM1 1079 aa15.64■□□□□ 0.09
PCDHA11-201ENST00000398640 KIAA1841Q6NSI8 718 aa15.64■□□□□ 0.09
PCDHA11-201ENST00000398640 SYDE2Q5VT97 1194 aa15.63■□□□□ 0.09
PCDHA11-201ENST00000398640 CEP128Q6ZU80 1094 aa15.63■□□□□ 0.09
PCDHA11-201ENST00000398640 PRPF31Q8WWY3 499 aaKnown RBP15.63■□□□□ 0.09
PCDHA11-201ENST00000398640 ZBED2Q9BTP6 218 aa15.63■□□□□ 0.09
PCDHA11-201ENST00000398640 CARD6Q9BX69 1037 aa15.63■□□□□ 0.09
PCDHA11-201ENST00000398640 VPS37BQ9H9H4 285 aa15.63■□□□□ 0.09
PCDHA11-201ENST00000398640 TMEM131LA2VDJ0 1609 aa15.63■□□□□ 0.09
PCDHA11-201ENST00000398640 FGAP02671 866 aa15.63■□□□□ 0.09
PCDHA11-201ENST00000398640 TUBBP07437 444 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms