RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 PHKA1P46020 1223 aa20.27■□□□□ 0.84
MMP9-201ENST00000372330 ELF3P78545 371 aaPredicted RBP20.27■□□□□ 0.84
MMP9-201ENST00000372330 BZW1Q7L1Q6 419 aaKnown RBP20.27■□□□□ 0.84
MMP9-201ENST00000372330 NKX2-3Q8TAU0 364 aa20.27■□□□□ 0.84
MMP9-201ENST00000372330 WHAMMQ8TF30 809 aa20.27■□□□□ 0.84
MMP9-201ENST00000372330 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.27■□□□□ 0.84
MMP9-201ENST00000372330 HINFPQ9BQA5 517 aa20.27■□□□□ 0.84
MMP9-201ENST00000372330 AATFQ9NY61 560 aaKnown RBP eCLIP20.27■□□□□ 0.84
MMP9-201ENST00000372330 TAB2Q9NYJ8 693 aa20.27■□□□□ 0.84
MMP9-201ENST00000372330 CORO1CQ9ULV4 474 aaPredicted RBP20.27■□□□□ 0.84
MMP9-201ENST00000372330 DDX60Q8IY21 1712 aaKnown RBP20.27■□□□□ 0.84
MMP9-201ENST00000372330 UQCRFS1P1P0C7P4 283 aa20.27■□□□□ 0.84
MMP9-201ENST00000372330 ZNF34Q8IZ26 560 aa20.27■□□□□ 0.84
MMP9-201ENST00000372330 CCDC155Q8N6L0 562 aa20.27■□□□□ 0.84
MMP9-201ENST00000372330 RNF14Q9UBS8 474 aa20.27■□□□□ 0.84
MMP9-201ENST00000372330 CTNND2Q9UQB3 1225 aa20.27■□□□□ 0.84
MMP9-201ENST00000372330 C15orf41Q9Y2V0 281 aa20.27■□□□□ 0.84
MMP9-201ENST00000372330 HYOU1Q9Y4L1 999 aa20.27■□□□□ 0.84
MMP9-201ENST00000372330 ZNF532Q9HCE3 1301 aa20.26■□□□□ 0.83
MMP9-201ENST00000372330 NUP98P52948 1817 aa20.26■□□□□ 0.83
MMP9-201ENST00000372330 USO1O60763 962 aaKnown RBP20.26■□□□□ 0.83
MMP9-201ENST00000372330 KCNB1Q14721 858 aa20.26■□□□□ 0.83
MMP9-201ENST00000372330 PUM3Q15397 648 aaKnown RBP20.26■□□□□ 0.83
MMP9-201ENST00000372330 MB21D1Q8N884 522 aa20.26■□□□□ 0.83
MMP9-201ENST00000372330 LPIN2Q92539 896 aa20.26■□□□□ 0.83
MMP9-201ENST00000372330 DENND2AQ9ULE3 1009 aa20.26■□□□□ 0.83
MMP9-201ENST00000372330 LEMD3Q9Y2U8 911 aa20.26■□□□□ 0.83
MMP9-201ENST00000372330 SPATA31A1Q5TZJ5 1347 aa20.26■□□□□ 0.83
MMP9-201ENST00000372330 ERICH2A1L162 156 aa20.26■□□□□ 0.83
MMP9-201ENST00000372330 EME2A4GXA9 379 aaPredicted RBP20.26■□□□□ 0.83
MMP9-201ENST00000372330 MPHOSPH10O00566 681 aaKnown RBP20.26■□□□□ 0.83
MMP9-201ENST00000372330 NTRK3Q16288 839 aa20.26■□□□□ 0.83
MMP9-201ENST00000372330 GKAP1Q5VSY0 366 aaPredicted RBP20.26■□□□□ 0.83
MMP9-201ENST00000372330 LRIG3Q6UXM1 1119 aa20.26■□□□□ 0.83
MMP9-201ENST00000372330 NBPF5PQ86XG9 351 aaPredicted RBP20.26■□□□□ 0.83
MMP9-201ENST00000372330 CCT6BQ92526 530 aa20.26■□□□□ 0.83
MMP9-201ENST00000372330 PHKBQ93100 1093 aa20.26■□□□□ 0.83
MMP9-201ENST00000372330 CSRNP2Q9H175 543 aa20.26■□□□□ 0.83
MMP9-201ENST00000372330 SH3BP1Q9Y3L3 701 aa20.26■□□□□ 0.83
MMP9-201ENST00000372330 MROH5Q6ZUA9 1318 aa20.25■□□□□ 0.83
MMP9-201ENST00000372330 MMP1P03956 469 aa20.25■□□□□ 0.83
MMP9-201ENST00000372330 PDE6AP16499 860 aa20.25■□□□□ 0.83
MMP9-201ENST00000372330 FGFR2P21802 821 aa20.25■□□□□ 0.83
MMP9-201ENST00000372330 AFMP43652 599 aa20.25■□□□□ 0.83
MMP9-201ENST00000372330 PAK1Q13153 545 aa20.25■□□□□ 0.83
MMP9-201ENST00000372330 SEMA3FQ13275 785 aa20.25■□□□□ 0.83
MMP9-201ENST00000372330 PDCD2Q16342 344 aaPredicted RBP20.25■□□□□ 0.83
MMP9-201ENST00000372330 ACCSLQ4AC99 568 aa20.25■□□□□ 0.83
MMP9-201ENST00000372330 TBC1D10CQ8IV04 446 aa20.25■□□□□ 0.83
MMP9-201ENST00000372330 RETREG2Q8NC44 543 aa20.25■□□□□ 0.83
MMP9-201ENST00000372330 PIK3R5Q8WYR1 880 aa20.25■□□□□ 0.83
MMP9-201ENST00000372330 OSBPL9Q96SU4 736 aa20.25■□□□□ 0.83
MMP9-201ENST00000372330 NUP58Q9BVL2 599 aa20.25■□□□□ 0.83
MMP9-201ENST00000372330 RCCD1A6NED2 376 aa20.25■□□□□ 0.83
MMP9-201ENST00000372330 H7C1D1 291 aa20.25■□□□□ 0.83
MMP9-201ENST00000372330 CDK17Q00537 523 aa20.25■□□□□ 0.83
MMP9-201ENST00000372330 MIS18BP1Q6P0N0 1132 aa20.25■□□□□ 0.83
MMP9-201ENST00000372330 HVCN1Q96D96 273 aa20.25■□□□□ 0.83
MMP9-201ENST00000372330 TMBIM4Q9HC24 238 aa20.25■□□□□ 0.83
MMP9-201ENST00000372330 TFR2Q9UP52 801 aa20.25■□□□□ 0.83
MMP9-201ENST00000372330 NRAPQ86VF7 1730 aa20.25■□□□□ 0.83
MMP9-201ENST00000372330 DOT1LQ8TEK3 1739 aa20.24■□□□□ 0.83
MMP9-201ENST00000372330 MACROD2A1Z1Q3 448 aa20.24■□□□□ 0.83
MMP9-201ENST00000372330 BTBD18B2RXH4 712 aa20.24■□□□□ 0.83
MMP9-201ENST00000372330 PPIP5K2O43314 1243 aa20.24■□□□□ 0.83
MMP9-201ENST00000372330 GSTA1P08263 222 aa20.24■□□□□ 0.83
MMP9-201ENST00000372330 SSRP1Q08945 709 aaKnown RBP20.24■□□□□ 0.83
MMP9-201ENST00000372330 APOA5Q6Q788 366 aa20.24■□□□□ 0.83
MMP9-201ENST00000372330 NHEJ1Q9H9Q4 299 aaPredicted RBP20.24■□□□□ 0.83
MMP9-201ENST00000372330 SLC39A2Q9NP94 309 aa20.24■□□□□ 0.83
MMP9-201ENST00000372330 BAIAP2L1Q9UHR4 511 aa20.24■□□□□ 0.83
MMP9-201ENST00000372330 LRP5O75197 1615 aa20.24■□□□□ 0.83
MMP9-201ENST00000372330 TCRBV5S4A2TA0A5A2 114 aa20.24■□□□□ 0.83
MMP9-201ENST00000372330 SMNDC1O75940 238 aaKnown RBP eCLIP20.24■□□□□ 0.83
MMP9-201ENST00000372330 PAEPP09466 180 aa20.24■□□□□ 0.83
MMP9-201ENST00000372330 MATR3P43243 847 aaKnown RBP eCLIP20.24■□□□□ 0.83
MMP9-201ENST00000372330 MYO1EQ12965 1108 aa20.24■□□□□ 0.83
MMP9-201ENST00000372330 CDC37Q16543 378 aaPredicted RBP20.24■□□□□ 0.83
MMP9-201ENST00000372330 DIS3L2Q8IYB7 885 aaKnown RBP20.24■□□□□ 0.83
MMP9-201ENST00000372330 SMYD4Q8IYR2 804 aaPredicted RBP20.24■□□□□ 0.83
MMP9-201ENST00000372330 ACSBG1Q96GR2 724 aa20.24■□□□□ 0.83
MMP9-201ENST00000372330 SLC12A6Q9UHW9 1150 aa20.24■□□□□ 0.83
MMP9-201ENST00000372330 A0A0G2JS52 829 aa20.23■□□□□ 0.83
MMP9-201ENST00000372330 LGALS16A8MUM7 142 aa20.23■□□□□ 0.83
MMP9-201ENST00000372330 ZBTB43O43298 467 aa20.23■□□□□ 0.83
MMP9-201ENST00000372330 ANP32DO95626 131 aa20.23■□□□□ 0.83
MMP9-201ENST00000372330 PEX19P40855 299 aa20.23■□□□□ 0.83
MMP9-201ENST00000372330 BIRC3Q13489 604 aa20.23■□□□□ 0.83
MMP9-201ENST00000372330 SPA17Q15506 151 aa20.23■□□□□ 0.83
MMP9-201ENST00000372330 DDB1Q16531 1140 aa20.23■□□□□ 0.83
MMP9-201ENST00000372330 SPRED3Q2MJR0 410 aa20.23■□□□□ 0.83
MMP9-201ENST00000372330 USP49Q70CQ1 688 aa20.23■□□□□ 0.83
MMP9-201ENST00000372330 CYB5R4Q7L1T6 521 aa20.23■□□□□ 0.83
MMP9-201ENST00000372330 HELBQ8NG08 1087 aaPredicted RBP20.23■□□□□ 0.83
MMP9-201ENST00000372330 ALS2CR12Q96Q35 445 aa20.23■□□□□ 0.83
MMP9-201ENST00000372330 NUCKS1Q9H1E3 243 aaKnown RBP20.23■□□□□ 0.83
MMP9-201ENST00000372330 GCOM1H8Y6P7 765 aaPredicted RBP20.22■□□□□ 0.83
MMP9-201ENST00000372330 SNAP23O00161 211 aa20.22■□□□□ 0.83
MMP9-201ENST00000372330 MYZAPP0CAP1 466 aa20.22■□□□□ 0.83
MMP9-201ENST00000372330 RPS6KA3P51812 740 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms