RNA–Protein interactions for RNA: ENST00000369592.1

SMNDC1-201, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SMNDC1, Length 1,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-201ENST00000369592 C7orf61Q8IZ16 206 aa23.92■■□□□ 1.42
SMNDC1-201ENST00000369592 TSEN34Q9BSV6 310 aaKnown RBP23.92■■□□□ 1.42
SMNDC1-201ENST00000369592 VAT1LQ9HCJ6 419 aa23.92■■□□□ 1.42
SMNDC1-201ENST00000369592 ADD3Q9UEY8 706 aaKnown RBP23.92■■□□□ 1.42
SMNDC1-201ENST00000369592 GNEQ9Y223 722 aaKnown RBP23.92■■□□□ 1.42
SMNDC1-201ENST00000369592 PTPDC1A2A3K4 754 aa23.91■■□□□ 1.42
SMNDC1-201ENST00000369592 ZBTB5O15062 677 aa23.91■■□□□ 1.42
SMNDC1-201ENST00000369592 ADCYAP1R1P41586 468 aa23.91■■□□□ 1.42
SMNDC1-201ENST00000369592 GJA9P57773 515 aa23.91■■□□□ 1.42
SMNDC1-201ENST00000369592 EXOSC10Q01780 885 aaKnown RBP23.91■■□□□ 1.42
SMNDC1-201ENST00000369592 SLC39A5Q6ZMH5 540 aa23.91■■□□□ 1.42
SMNDC1-201ENST00000369592 RNF180Q86T96 592 aa23.91■■□□□ 1.42
SMNDC1-201ENST00000369592 FBXO11Q86XK2 927 aa23.91■■□□□ 1.42
SMNDC1-201ENST00000369592 ZNF654Q8IZM8 581 aa23.91■■□□□ 1.42
SMNDC1-201ENST00000369592 DNERQ8NFT8 737 aa23.91■■□□□ 1.42
SMNDC1-201ENST00000369592 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.9■■□□□ 1.42
SMNDC1-201ENST00000369592 RBM47A0AV96 593 aaKnown RBP23.9■■□□□ 1.42
SMNDC1-201ENST00000369592 MYADML2A6NDP7 307 aa23.9■■□□□ 1.42
SMNDC1-201ENST00000369592 SOX1O00570 391 aaPredicted RBP23.9■■□□□ 1.42
SMNDC1-201ENST00000369592 DDAH1O94760 285 aa23.9■■□□□ 1.42
SMNDC1-201ENST00000369592 IRX5P78411 483 aaPredicted RBP23.9■■□□□ 1.42
SMNDC1-201ENST00000369592 RNF20Q5VTR2 975 aa23.9■■□□□ 1.42
SMNDC1-201ENST00000369592 CATIPQ7Z7H3 387 aa23.9■■□□□ 1.42
SMNDC1-201ENST00000369592 TMTC2Q8N394 836 aa23.9■■□□□ 1.42
SMNDC1-201ENST00000369592 VTA1Q9NP79 307 aa23.9■■□□□ 1.42
SMNDC1-201ENST00000369592 PDGFCQ9NRA1 345 aa23.9■■□□□ 1.42
SMNDC1-201ENST00000369592 COL20A1Q9P218 1284 aa23.9■■□□□ 1.42
SMNDC1-201ENST00000369592 A0A0C4DFX4 3053 aa23.89■■□□□ 1.42
SMNDC1-201ENST00000369592 CALML3P27482 149 aa23.89■■□□□ 1.41
SMNDC1-201ENST00000369592 SMARCA1P28370 1054 aa23.89■■□□□ 1.41
SMNDC1-201ENST00000369592 ADCK5Q3MIX3 580 aa23.89■■□□□ 1.41
SMNDC1-201ENST00000369592 SGMS1Q86VZ5 419 aa23.89■■□□□ 1.41
SMNDC1-201ENST00000369592 SYTL5Q8TDW5 730 aaPredicted RBP23.89■■□□□ 1.41
SMNDC1-201ENST00000369592 LRCH3Q96II8 777 aa23.89■■□□□ 1.41
SMNDC1-201ENST00000369592 AMNQ9BXJ7 453 aa23.89■■□□□ 1.41
SMNDC1-201ENST00000369592 MRPL11Q9Y3B7 192 aaKnown RBP23.89■■□□□ 1.41
SMNDC1-201ENST00000369592 IQSEC1Q6DN90 963 aa23.88■■□□□ 1.41
SMNDC1-201ENST00000369592 FBXO16Q8IX29 292 aaPredicted RBP23.88■■□□□ 1.41
SMNDC1-201ENST00000369592 GDF15Q99988 308 aa23.88■■□□□ 1.41
SMNDC1-201ENST00000369592 LAMA3Q16787 3333 aa23.87■■□□□ 1.41
SMNDC1-201ENST00000369592 SMPD1P17405 629 aa23.87■■□□□ 1.41
SMNDC1-201ENST00000369592 HSD17B4P51659 736 aa23.87■■□□□ 1.41
SMNDC1-201ENST00000369592 ATN1P54259 1190 aaPredicted RBP23.87■■□□□ 1.41
SMNDC1-201ENST00000369592 RTP1P59025 263 aa23.87■■□□□ 1.41
SMNDC1-201ENST00000369592 TNFAIP2Q03169 654 aa23.87■■□□□ 1.41
SMNDC1-201ENST00000369592 TMEM63BQ5T3F8 832 aa23.87■■□□□ 1.41
SMNDC1-201ENST00000369592 MCF2L2Q86YR7 1114 aa23.87■■□□□ 1.41
SMNDC1-201ENST00000369592 NEK1Q96PY6 1258 aa23.87■■□□□ 1.41
SMNDC1-201ENST00000369592 PIGSQ96S52 555 aa23.87■■□□□ 1.41
SMNDC1-201ENST00000369592 MYL10Q9BUA6 226 aa23.87■■□□□ 1.41
SMNDC1-201ENST00000369592 SPZ1Q9BXG8 430 aa23.87■■□□□ 1.41
SMNDC1-201ENST00000369592 Q9Y3F1 56 aa23.87■■□□□ 1.41
SMNDC1-201ENST00000369592 A0A1W2PPC1 479 aa23.86■■□□□ 1.41
SMNDC1-201ENST00000369592 A0A1W2PQ45 241 aaPredicted RBP23.86■■□□□ 1.41
SMNDC1-201ENST00000369592 A0A1W2PQY0 241 aa23.86■■□□□ 1.41
SMNDC1-201ENST00000369592 MOXD2PA6NHM9 499 aa23.86■■□□□ 1.41
SMNDC1-201ENST00000369592 DHX16O60231 1041 aaKnown RBP23.86■■□□□ 1.41
SMNDC1-201ENST00000369592 CENPBP07199 599 aaPredicted RBP23.86■■□□□ 1.41
SMNDC1-201ENST00000369592 HSPA4P34932 840 aa23.86■■□□□ 1.41
SMNDC1-201ENST00000369592 ACLYP53396 1101 aa23.86■■□□□ 1.41
SMNDC1-201ENST00000369592 KCNA10Q16322 511 aa23.86■■□□□ 1.41
SMNDC1-201ENST00000369592 FERMT2Q96AC1 680 aa23.86■■□□□ 1.41
SMNDC1-201ENST00000369592 ZMYND8Q9ULU4 1186 aaPredicted RBP23.86■■□□□ 1.41
SMNDC1-201ENST00000369592 KIAA1217Q5T5P2 1943 aa23.86■■□□□ 1.41
SMNDC1-201ENST00000369592 PNMA6FA0A0J9YX94 578 aa23.85■■□□□ 1.41
SMNDC1-201ENST00000369592 PTGS1P23219 599 aa23.85■■□□□ 1.41
SMNDC1-201ENST00000369592 DHX32Q7L7V1 743 aaKnown RBP23.85■■□□□ 1.41
SMNDC1-201ENST00000369592 EEPD1Q7L9B9 569 aa23.85■■□□□ 1.41
SMNDC1-201ENST00000369592 SAMD3Q8N6K7 520 aa23.85■■□□□ 1.41
SMNDC1-201ENST00000369592 TAAR1Q96RJ0 339 aa23.85■■□□□ 1.41
SMNDC1-201ENST00000369592 LRRC2Q9BYS8 371 aa23.85■■□□□ 1.41
SMNDC1-201ENST00000369592 PCDHA1Q9Y5I3 950 aa23.85■■□□□ 1.41
SMNDC1-201ENST00000369592 LTBP2Q14767 1821 aa23.84■■□□□ 1.41
SMNDC1-201ENST00000369592 MYCNP04198 464 aaPredicted RBP23.84■■□□□ 1.41
SMNDC1-201ENST00000369592 BMP8BP34820 402 aa23.84■■□□□ 1.41
SMNDC1-201ENST00000369592 DUSP28Q4G0W2 176 aa23.84■■□□□ 1.41
SMNDC1-201ENST00000369592 NUP133Q8WUM0 1156 aa23.84■■□□□ 1.41
SMNDC1-201ENST00000369592 MAP3K20Q9NYL2 800 aaKnown RBP23.84■■□□□ 1.41
SMNDC1-201ENST00000369592 EPB41L2O43491 1005 aaKnown RBP23.83■■□□□ 1.41
SMNDC1-201ENST00000369592 C6orf222P0C671 652 aaPredicted RBP23.83■■□□□ 1.41
SMNDC1-201ENST00000369592 SYN1P17600 705 aa23.83■■□□□ 1.41
SMNDC1-201ENST00000369592 KIF5BP33176 963 aa23.83■■□□□ 1.41
SMNDC1-201ENST00000369592 KRT32Q14532 448 aa23.83■■□□□ 1.41
SMNDC1-201ENST00000369592 TRIM60Q495X7 471 aa23.83■■□□□ 1.41
SMNDC1-201ENST00000369592 SRBD1Q8N5C6 995 aaKnown RBP23.83■■□□□ 1.41
SMNDC1-201ENST00000369592 PCSK9Q8NBP7 692 aaKnown RBP23.83■■□□□ 1.41
SMNDC1-201ENST00000369592 CTCFLQ8NI51 663 aaPredicted RBP23.83■■□□□ 1.41
SMNDC1-201ENST00000369592 LZTS2Q9BRK4 669 aa23.83■■□□□ 1.41
SMNDC1-201ENST00000369592 CCDC69A6NI79 296 aa23.82■■□□□ 1.4
SMNDC1-201ENST00000369592 PLEKHA8P1O95397 391 aa23.82■■□□□ 1.4
SMNDC1-201ENST00000369592 ASGR1P07306 291 aa23.82■■□□□ 1.4
SMNDC1-201ENST00000369592 CALM1P0DP23 149 aa23.82■■□□□ 1.4
SMNDC1-201ENST00000369592 CALM2P0DP24 149 aa23.82■■□□□ 1.4
SMNDC1-201ENST00000369592 CALM3P0DP25 149 aa23.82■■□□□ 1.4
SMNDC1-201ENST00000369592 TRAF1Q13077 416 aa23.82■■□□□ 1.4
SMNDC1-201ENST00000369592 TLK2Q86UE8 772 aa23.82■■□□□ 1.4
SMNDC1-201ENST00000369592 HOMER1Q86YM7 354 aa23.82■■□□□ 1.4
SMNDC1-201ENST00000369592 NSUN6Q8TEA1 469 aaKnown RBP23.82■■□□□ 1.4
SMNDC1-201ENST00000369592 IWS1Q96ST2 819 aa23.82■■□□□ 1.4
SMNDC1-201ENST00000369592 SPC25Q9HBM1 224 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms