RNA–Protein interactions for RNA: ENST00000351937.9

TRIM41-202, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best) BASIC

Gene TRIM41, Length 2,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-202ENST00000351937 TECP42680 631 aa20.88■□□□□ 0.93
TRIM41-202ENST00000351937 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.88■□□□□ 0.93
TRIM41-202ENST00000351937 TEX2Q8IWB9 1127 aa20.88■□□□□ 0.93
TRIM41-202ENST00000351937 CUEDC2Q9H467 287 aa20.88■□□□□ 0.93
TRIM41-202ENST00000351937 SLC37A4O43826 429 aa20.88■□□□□ 0.93
TRIM41-202ENST00000351937 FXR2P51116 673 aaKnown RBP eCLIP20.88■□□□□ 0.931e-8■■□□□ 13.3
TRIM41-202ENST00000351937 USP11P51784 963 aa20.88■□□□□ 0.93
TRIM41-202ENST00000351937 CABP7Q86V35 215 aa20.88■□□□□ 0.93
TRIM41-202ENST00000351937 MTRQ99707 1265 aa20.88■□□□□ 0.93
TRIM41-202ENST00000351937 DEFB129Q9H1M3 183 aa20.88■□□□□ 0.93
TRIM41-202ENST00000351937 TXKP42681 527 aa20.87■□□□□ 0.93
TRIM41-202ENST00000351937 TMEM266Q2M3C6 531 aa20.87■□□□□ 0.93
TRIM41-202ENST00000351937 NAALADL2Q58DX5 795 aa20.87■□□□□ 0.93
TRIM41-202ENST00000351937 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.87■□□□□ 0.93
TRIM41-202ENST00000351937 MYL1P05976 194 aa20.87■□□□□ 0.93
TRIM41-202ENST00000351937 PDIA5Q14554 519 aa20.87■□□□□ 0.93
TRIM41-202ENST00000351937 USH1GQ495M9 461 aa20.87■□□□□ 0.93
TRIM41-202ENST00000351937 FAM160B2Q86V87 743 aa20.87■□□□□ 0.93
TRIM41-202ENST00000351937 RAB34Q9BZG1 259 aa20.87■□□□□ 0.93
TRIM41-202ENST00000351937 MAGEF1Q9HAY2 307 aa20.87■□□□□ 0.93
TRIM41-202ENST00000351937 DDX25Q9UHL0 483 aaKnown RBP20.87■□□□□ 0.93
TRIM41-202ENST00000351937 ASTN2O75129 1339 aaPredicted RBP20.86■□□□□ 0.93
TRIM41-202ENST00000351937 ERCC5P28715 1186 aaPredicted RBP20.86■□□□□ 0.93
TRIM41-202ENST00000351937 CASP1P29466 404 aa20.86■□□□□ 0.93
TRIM41-202ENST00000351937 STAMQ92783 540 aa20.86■□□□□ 0.93
TRIM41-202ENST00000351937 ANO3Q9BYT9 981 aa20.86■□□□□ 0.93
TRIM41-202ENST00000351937 HSD3B7Q9H2F3 369 aa20.86■□□□□ 0.93
TRIM41-202ENST00000351937 FEM1BQ9UK73 627 aa20.86■□□□□ 0.93
TRIM41-202ENST00000351937 CTNND1O60716 968 aaKnown RBP20.86■□□□□ 0.93
TRIM41-202ENST00000351937 FOSP01100 380 aaPredicted RBP20.86■□□□□ 0.93
TRIM41-202ENST00000351937 ENOX1Q8TC92 643 aaKnown RBP20.86■□□□□ 0.93
TRIM41-202ENST00000351937 LMNB1P20700 586 aa20.85■□□□□ 0.93
TRIM41-202ENST00000351937 ARHGAP27Q6ZUM4 889 aa20.85■□□□□ 0.93
TRIM41-202ENST00000351937 CUL4BQ13620 913 aa20.85■□□□□ 0.93
TRIM41-202ENST00000351937 ZYXQ15942 572 aaKnown RBP20.85■□□□□ 0.93
TRIM41-202ENST00000351937 MOXD1Q6UVY6 613 aa20.85■□□□□ 0.93
TRIM41-202ENST00000351937 GLIS2Q9BZE0 524 aaPredicted RBP20.85■□□□□ 0.93
TRIM41-202ENST00000351937 BLZF1Q9H2G9 400 aa20.85■□□□□ 0.93
TRIM41-202ENST00000351937 RANBP17Q9H2T7 1088 aaKnown RBP20.85■□□□□ 0.93
TRIM41-202ENST00000351937 KBTBD4Q9NVX7 518 aa20.85■□□□□ 0.93
TRIM41-202ENST00000351937 RMND1Q9NWS8 449 aa20.85■□□□□ 0.93
TRIM41-202ENST00000351937 LRWD1Q9UFC0 647 aa20.85■□□□□ 0.93
TRIM41-202ENST00000351937 CYP3A7-CYP3A51PA0A087WV96 503 aa20.84■□□□□ 0.93
TRIM41-202ENST00000351937 CYP3A7P24462 503 aa20.84■□□□□ 0.93
TRIM41-202ENST00000351937 LMOD1P29536 600 aaPredicted RBP20.84■□□□□ 0.93
TRIM41-202ENST00000351937 GPC2Q8N158 579 aa20.84■□□□□ 0.93
TRIM41-202ENST00000351937 ZNF341Q9BYN7 854 aa20.84■□□□□ 0.93
TRIM41-202ENST00000351937 TTC12Q9H892 705 aaPredicted RBP20.84■□□□□ 0.93
TRIM41-202ENST00000351937 PIK3CDO00329 1044 aa20.84■□□□□ 0.93
TRIM41-202ENST00000351937 RRP9O43818 475 aaKnown RBP20.84■□□□□ 0.93
TRIM41-202ENST00000351937 APOBEC3FQ8IUX4 373 aaKnown RBP20.84■□□□□ 0.93
TRIM41-202ENST00000351937 HOOK2Q96ED9 719 aa20.84■□□□□ 0.93
TRIM41-202ENST00000351937 DCAF15Q66K64 600 aa20.83■□□□□ 0.93
TRIM41-202ENST00000351937 CRYGNQ8WXF5 182 aa20.83■□□□□ 0.93
TRIM41-202ENST00000351937 KIFC2Q96AC6 838 aa20.83■□□□□ 0.93
TRIM41-202ENST00000351937 CALML4Q96GE6 196 aa20.83■□□□□ 0.93
TRIM41-202ENST00000351937 FEZ1Q99689 392 aa20.83■□□□□ 0.93
TRIM41-202ENST00000351937 MMTAG2Q9BU76 263 aaKnown RBP20.83■□□□□ 0.93
TRIM41-202ENST00000351937 GPRC5DQ9NZD1 345 aa20.83■□□□□ 0.93
TRIM41-202ENST00000351937 SPDYE3A6NKU9 549 aa20.83■□□□□ 0.92
TRIM41-202ENST00000351937 PLCG1P19174 1290 aa20.83■□□□□ 0.92
TRIM41-202ENST00000351937 SEMA3FQ13275 785 aa20.83■□□□□ 0.92
TRIM41-202ENST00000351937 CCDC186Q7Z3E2 898 aa20.83■□□□□ 0.92
TRIM41-202ENST00000351937 MBOAT7Q96N66 472 aa20.83■□□□□ 0.92
TRIM41-202ENST00000351937 FANCLQ9NW38 375 aa20.83■□□□□ 0.92
TRIM41-202ENST00000351937 OPLAHO14841 1288 aa20.82■□□□□ 0.92
TRIM41-202ENST00000351937 RPN1P04843 607 aaKnown RBP20.82■□□□□ 0.92
TRIM41-202ENST00000351937 FMR1Q06787 632 aaKnown RBP eCLIP20.82■□□□□ 0.92
TRIM41-202ENST00000351937 LPAR1Q92633 364 aa20.82■□□□□ 0.92
TRIM41-202ENST00000351937 HAS1Q92839 578 aa20.82■□□□□ 0.92
TRIM41-202ENST00000351937 R3HCC1Q9Y3T6 440 aaKnown RBP20.82■□□□□ 0.92
TRIM41-202ENST00000351937 MYH7BA7E2Y1 1941 aa20.82■□□□□ 0.92
TRIM41-202ENST00000351937 FANCCQ00597 558 aa20.82■□□□□ 0.92
TRIM41-202ENST00000351937 NBPF12Q5TAG4 269 aaPredicted RBP20.82■□□□□ 0.92
TRIM41-202ENST00000351937 CCDC84Q86UT8 332 aaPredicted RBP20.82■□□□□ 0.92
TRIM41-202ENST00000351937 KIAA1683Q9H0B3 1180 aa20.82■□□□□ 0.92
TRIM41-202ENST00000351937 IFNKQ9P0W0 207 aa20.82■□□□□ 0.92
TRIM41-202ENST00000351937 ATAD5Q96QE3 1844 aa20.82■□□□□ 0.92
TRIM41-202ENST00000351937 ARHGAP4P98171 946 aa20.81■□□□□ 0.92
TRIM41-202ENST00000351937 PLIN2Q99541 437 aa20.81■□□□□ 0.92
TRIM41-202ENST00000351937 XPO4Q9C0E2 1151 aaKnown RBP20.81■□□□□ 0.92
TRIM41-202ENST00000351937 NRBP1Q9UHY1 535 aa20.81■□□□□ 0.92
TRIM41-202ENST00000351937 MARCH6O60337 910 aa20.81■□□□□ 0.92
TRIM41-202ENST00000351937 ATP1A3P13637 1013 aa20.81■□□□□ 0.92
TRIM41-202ENST00000351937 PTGS1P23219 599 aa20.81■□□□□ 0.92
TRIM41-202ENST00000351937 ANGEL2Q5VTE6 544 aaKnown RBP20.81■□□□□ 0.92
TRIM41-202ENST00000351937 P2RX7Q99572 595 aaKnown RBP20.81■□□□□ 0.92
TRIM41-202ENST00000351937 NFE2L3Q9Y4A8 694 aa20.81■□□□□ 0.92
TRIM41-202ENST00000351937 SREBF1P36956 1147 aa20.81■□□□□ 0.92
TRIM41-202ENST00000351937 ZNF658Q5TYW1 1059 aaPredicted RBP20.81■□□□□ 0.92
TRIM41-202ENST00000351937 FHDC1Q9C0D6 1143 aaPredicted RBP20.81■□□□□ 0.92
TRIM41-202ENST00000351937 PPP1R3GB7ZBB8 358 aa20.8■□□□□ 0.92
TRIM41-202ENST00000351937 WDR46O15213 610 aaKnown RBP20.8■□□□□ 0.92
TRIM41-202ENST00000351937 KCNB1Q14721 858 aa20.8■□□□□ 0.92
TRIM41-202ENST00000351937 CCDC174Q6PII3 467 aa20.8■□□□□ 0.92
TRIM41-202ENST00000351937 KCNF1Q9H3M0 494 aa20.8■□□□□ 0.92
TRIM41-202ENST00000351937 PCDHA12Q9UN75 941 aa20.8■□□□□ 0.92
TRIM41-202ENST00000351937 CBFA2T2O43439 604 aa20.8■□□□□ 0.92
TRIM41-202ENST00000351937 CD44P16070 742 aaKnown RBP20.8■□□□□ 0.92
TRIM41-202ENST00000351937 KRT79Q5XKE5 535 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms