RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 TICAM2Q86XR7 235 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 CCDC65Q8IXS2 484 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 TSGA10Q9BZW7 698 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 KIAA1024Q9UPX6 916 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 RRP15Q9Y3B9 282 aaKnown RBP12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 NWD1Q149M9 1564 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 XRN1Q8IZH2 1706 aaKnown RBP12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 SPDYE3A6NKU9 549 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 FAM196BA6NMK8 535 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 LGALS16A8MUM7 142 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 CCNE1P24864 410 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 STK4Q13043 487 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 PKN1Q16512 942 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 KIAA0753Q2KHM9 967 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 SFMBT2Q5VUG0 894 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 GPBP1Q86WP2 473 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 BCAS4Q8TDM0 211 aa12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 LARP4BQ92615 738 aaKnown RBP12.28□□□□□ -0.44
SEMA4D-201ENST00000339861 TUBBP07437 444 aa12.27□□□□□ -0.44
SEMA4D-201ENST00000339861 ABCB4P21439 1286 aa12.27□□□□□ -0.44
SEMA4D-201ENST00000339861 CYP2C19P33261 490 aa12.27□□□□□ -0.44
SEMA4D-201ENST00000339861 KCNJ6P48051 423 aa12.27□□□□□ -0.44
SEMA4D-201ENST00000339861 TTC31Q49AM3 519 aaPredicted RBP12.27□□□□□ -0.44
SEMA4D-201ENST00000339861 TBC1D10BQ4KMP7 808 aaPredicted RBP12.27□□□□□ -0.44
SEMA4D-201ENST00000339861 ANKRD40Q6AI12 368 aa12.27□□□□□ -0.44
SEMA4D-201ENST00000339861 POTEDQ86YR6 584 aa12.27□□□□□ -0.44
SEMA4D-201ENST00000339861 MYOCDQ8IZQ8 938 aa12.27□□□□□ -0.44
SEMA4D-201ENST00000339861 TRIM58Q8NG06 486 aa12.27□□□□□ -0.44
SEMA4D-201ENST00000339861 CTNNBL1Q8WYA6 563 aaPredicted RBP12.27□□□□□ -0.44
SEMA4D-201ENST00000339861 PACSIN2Q9UNF0 486 aaPredicted RBP12.27□□□□□ -0.44
SEMA4D-201ENST00000339861 KCNK3O14649 394 aa12.27□□□□□ -0.45
SEMA4D-201ENST00000339861 SLC1A4P43007 532 aa12.27□□□□□ -0.45
SEMA4D-201ENST00000339861 TUBB4BP68371 445 aa12.27□□□□□ -0.45
SEMA4D-201ENST00000339861 NFRKBQ6P4R8 1299 aa12.27□□□□□ -0.45
SEMA4D-201ENST00000339861 CCDC84Q86UT8 332 aaPredicted RBP12.27□□□□□ -0.45
SEMA4D-201ENST00000339861 TXNRD3Q86VQ6 643 aa12.27□□□□□ -0.45
SEMA4D-201ENST00000339861 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.27□□□□□ -0.45
SEMA4D-201ENST00000339861 USP17L5A8MUK1 530 aa12.27□□□□□ -0.45
SEMA4D-201ENST00000339861 ZNF18P17022 549 aa12.27□□□□□ -0.45
SEMA4D-201ENST00000339861 FGFR2P21802 821 aa12.27□□□□□ -0.45
SEMA4D-201ENST00000339861 PRR16Q569H4 304 aa12.27□□□□□ -0.45
SEMA4D-201ENST00000339861 GOLGA5Q8TBA6 731 aa12.27□□□□□ -0.45
SEMA4D-201ENST00000339861 CUL5Q93034 780 aa12.27□□□□□ -0.45
SEMA4D-201ENST00000339861 LRRC27Q9C0I9 530 aa12.27□□□□□ -0.45
SEMA4D-201ENST00000339861 EHD2Q9NZN4 543 aa12.27□□□□□ -0.45
SEMA4D-201ENST00000339861 ARHGAP23Q9P227 1491 aa12.27□□□□□ -0.45
SEMA4D-201ENST00000339861 DDX39AO00148 427 aaKnown RBP12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 HGSO14964 777 aaPredicted RBP12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 CETN3O15182 167 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 CAMTA2O94983 1202 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 PLEKP08567 350 aaPredicted RBP12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 KIF11P52732 1056 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 VGLL2Q8N8G2 317 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 PROCA1Q8NCQ7 364 aaPredicted RBP12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 FAM71BQ8TC56 605 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 KRT12Q99456 494 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 NDST4Q9H3R1 872 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 PANK4Q9NVE7 773 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 H3BQF6 201 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 ATP8B1O43520 1251 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 ZBED6P86452 979 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 PABPC4Q13310 644 aaKnown RBP eCLIP12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 ASIC2Q16515 512 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 FAM26FQ5R3K3 315 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 CERS3Q8IU89 383 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 DYDC1Q8WWB3 177 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 ADAMTS1Q9UHI8 967 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 TACC3Q9Y6A5 838 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 CNTNAP5Q8WYK1 1306 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 OVOS2A0A0G2JMS6 1433 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 CACNA1FO60840 1977 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 TDP2O95551 362 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 PLCG2P16885 1265 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 CDK8P49336 464 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 PMS1P54277 932 aaKnown RBP12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 CACNB3P54284 484 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 GFPT1Q06210 699 aaPredicted RBP12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 KCTD19Q17RG1 926 aaPredicted RBP12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 CCDC25Q86WR0 208 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 UHMK1Q8TAS1 419 aaKnown RBP12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 TBC1D5Q92609 795 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 FUT8Q9BYC5 575 aa12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 DDX25Q9UHL0 483 aaKnown RBP12.26□□□□□ -0.45
SEMA4D-201ENST00000339861 GOLGA6L7A0A1B0GV03 622 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 GGCXP38435 758 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 NKX1-1Q15270 411 aaPredicted RBP12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 CFAP221Q4G0U5 840 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 CCDC155Q8N6L0 562 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 OTUD6BQ8N6M0 293 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 FAM133AQ8N9E0 248 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 EXOC4Q96A65 974 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 DHTKD1Q96HY7 919 aaPredicted RBP12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 HSD3B7Q9H2F3 369 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 FAM205AQ6ZU69 1335 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 GCNT3O95395 438 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 UBXN2AP68543 259 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 IRX5P78411 483 aaPredicted RBP12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 SEC23AQ15436 765 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 CCDC93Q567U6 631 aa12.25□□□□□ -0.45
SEMA4D-201ENST00000339861 ERMNQ8TAM6 284 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms