RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 XIRP1Q702N8 1843 aaKnown RBP7.18□□□□□ -1.26
HMG20A-201ENST00000336216 LMO7Q8WWI1 1683 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 GSTTP1A0A1W2PQM5 241 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 SMIM23A6NLE4 172 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 USP17L5A8MUK1 530 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 USP17L15C9J2P7 530 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 USP17L13C9JLJ4 530 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 USP17L11C9JVI0 530 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 USP17L18D6R9N7 530 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 USP17L22D6RA61 530 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 USP17L17D6RBQ6 530 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 USP17L19D6RCP7 530 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 USP17L20D6RJB6 530 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 OR52Z1P0C646 297 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 HPDP32754 393 aaPredicted RBP7.18□□□□□ -1.26
HMG20A-201ENST00000336216 USP17L24Q0WX57 530 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 MORC3Q14149 939 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 ICE2Q659A1 982 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 USP17L6PQ6QN14 398 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 C3orf67Q6ZVT6 689 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 CCDC65Q8IXS2 484 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 ZNF34Q8IZ26 560 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 GJA10Q969M2 543 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 TMEM47Q9BQJ4 181 aa7.18□□□□□ -1.26
HMG20A-201ENST00000336216 GOLGA6BA6NDN3 693 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 SFI1A8K8P3 1242 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 ATP8B1O43520 1251 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 RPN1P04843 607 aaKnown RBP7.17□□□□□ -1.26
HMG20A-201ENST00000336216 INPP5BP32019 993 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 NOA1Q8NC60 698 aaKnown RBP7.17□□□□□ -1.26
HMG20A-201ENST00000336216 HPS3Q969F9 1004 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 CEP95Q96GE4 821 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 TRIM31Q9BZY9 425 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 TESPA1A2RU30 521 aaPredicted RBP7.17□□□□□ -1.26
HMG20A-201ENST00000336216 TRIM49BA6NDI0 452 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 B4DLN1 442 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 TACC1O75410 805 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 CHRNA5P30532 468 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 CXCR5P32302 372 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 GNGT1P63211 74 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 CYP27A1Q02318 531 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 IFFO1Q0D2I5 559 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 ARHGAP44Q17R89 818 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 IQCEQ6IPM2 695 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 RAD9BQ6WBX8 426 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 TC2NQ8N9U0 490 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 IGDCC4Q8TDY8 1250 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 KCNB2Q92953 911 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 SLC4A9Q96Q91 983 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 TMEM260Q9NX78 707 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 TRIM10Q9UDY6 481 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 DNM3Q9UQ16 869 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.17□□□□□ -1.26
HMG20A-201ENST00000336216 CAPN7Q9Y6W3 813 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 USP42Q9H9J4 1324 aaKnown RBP7.17□□□□□ -1.26
HMG20A-201ENST00000336216 CAMTA1Q9Y6Y1 1673 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 ANKRD62A6NC57 917 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 POTEMA6NI47 508 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 BBOX1O75936 387 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 ZRANB2O95218 330 aaKnown RBP eCLIP7.17□□□□□ -1.26
HMG20A-201ENST00000336216 PDE6BP35913 854 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 GPSM2P81274 684 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 CUL4BQ13620 913 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 CNNM4Q6P4Q7 775 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 GPBP1Q86WP2 473 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 ADGRG1Q9Y653 693 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 SAR1BQ9Y6B6 198 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 HSF2BPO75031 334 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 KRT13P13646 458 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 MAGEA1P43355 309 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 CYP2J2P51589 502 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 KRT83P78385 493 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 SLC7A5Q01650 507 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 ABCB5Q2M3G0 1257 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 CCDC93Q567U6 631 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 CYP26C1Q6V0L0 522 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 TICAM2Q86XR7 235 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 SRBD1Q8N5C6 995 aaKnown RBP7.17□□□□□ -1.26
HMG20A-201ENST00000336216 FAM71BQ8TC56 605 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 SH2D3AQ9BRG2 576 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 LRRC27Q9C0I9 530 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 EHMT1Q9H9B1 1298 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 ARHGEF10LQ9HCE6 1279 aa7.17□□□□□ -1.26
HMG20A-201ENST00000336216 DDX25Q9UHL0 483 aaKnown RBP7.17□□□□□ -1.26
HMG20A-201ENST00000336216 TLDC2A0PJX2 215 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 CETN3O15182 167 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 KDM6AO15550 1401 aaPredicted RBP7.16□□□□□ -1.26
HMG20A-201ENST00000336216 BUB1O43683 1085 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 PPP6R2O75170 966 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 POLD1P28340 1107 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 TSGA10IPQ3SY00 556 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 INTS5Q6P9B9 1019 aaKnown RBP7.16□□□□□ -1.26
HMG20A-201ENST00000336216 ADAT2Q7Z6V5 191 aaKnown RBP7.16□□□□□ -1.26
HMG20A-201ENST00000336216 TMTC1Q8IUR5 882 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 STAG1Q8WVM7 1258 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 NSUN4Q96CB9 384 aaKnown RBP7.16□□□□□ -1.26
HMG20A-201ENST00000336216 MKRN1Q9UHC7 482 aaKnown RBP7.16□□□□□ -1.26
HMG20A-201ENST00000336216 ABCB4P21439 1286 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 MCM3P25205 808 aa7.16□□□□□ -1.26
HMG20A-201ENST00000336216 SPATA1Q5VX52 437 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms