RNA–Protein interactions for RNA: ENST00000315869.7

TFE3-201, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFE3, Length 3,415 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-201ENST00000315869 FBXO33Q7Z6M2 555 aa16.61■□□□□ 0.25
TFE3-201ENST00000315869 TNFRSF25Q93038 417 aa16.61■□□□□ 0.25
TFE3-201ENST00000315869 PCDHA4Q9UN74 947 aa16.61■□□□□ 0.25
TFE3-201ENST00000315869 RAD21O60216 631 aa16.61■□□□□ 0.25
TFE3-201ENST00000315869 IVLP07476 585 aa16.61■□□□□ 0.25
TFE3-201ENST00000315869 TXKP42681 527 aa16.61■□□□□ 0.25
TFE3-201ENST00000315869 HERVK_113P62684 666 aa16.61■□□□□ 0.25
TFE3-201ENST00000315869 TUBB4BP68371 445 aa16.61■□□□□ 0.25
TFE3-201ENST00000315869 CKAP4Q07065 602 aaKnown RBP16.61■□□□□ 0.25
TFE3-201ENST00000315869 NSUN4Q96CB9 384 aaKnown RBP16.61■□□□□ 0.25
TFE3-201ENST00000315869 LRWD1Q9UFC0 647 aa16.61■□□□□ 0.25
TFE3-201ENST00000315869 SOGA3Q5TF21 947 aa16.61■□□□□ 0.25
TFE3-201ENST00000315869 TTC19Q6DKK2 380 aaPredicted RBP16.61■□□□□ 0.25
TFE3-201ENST00000315869 SND1Q7KZF4 910 aaKnown RBP eCLIP16.61■□□□□ 0.25
TFE3-201ENST00000315869 RUFY1Q96T51 708 aa16.61■□□□□ 0.25
TFE3-201ENST00000315869 SMARCAL1Q9NZC9 954 aa16.61■□□□□ 0.25
TFE3-201ENST00000315869 LRRC10BA6NIK2 292 aa16.6■□□□□ 0.25
TFE3-201ENST00000315869 TULP1O00294 542 aaPredicted RBP16.6■□□□□ 0.25
TFE3-201ENST00000315869 PLEKP08567 350 aaPredicted RBP16.6■□□□□ 0.25
TFE3-201ENST00000315869 USP14P54578 494 aa16.6■□□□□ 0.25
TFE3-201ENST00000315869 SLC7A5Q01650 507 aa16.6■□□□□ 0.25
TFE3-201ENST00000315869 GRAPQ13588 217 aa16.6■□□□□ 0.25
TFE3-201ENST00000315869 PLCD3Q8N3E9 789 aa16.6■□□□□ 0.25
TFE3-201ENST00000315869 EHBP1Q8NDI1 1231 aa16.6■□□□□ 0.25
TFE3-201ENST00000315869 GRAPLQ8TC17 118 aaPredicted RBP16.6■□□□□ 0.25
TFE3-201ENST00000315869 SECISBP2LQ93073 1101 aaKnown RBP16.6■□□□□ 0.25
TFE3-201ENST00000315869 TSPYL1Q9H0U9 437 aa16.6■□□□□ 0.25
TFE3-201ENST00000315869 USO1O60763 962 aaKnown RBP16.6■□□□□ 0.25
TFE3-201ENST00000315869 RNASE9P60153 205 aaKnown RBP16.6■□□□□ 0.25
TFE3-201ENST00000315869 RCCD1A6NED2 376 aa16.6■□□□□ 0.25
TFE3-201ENST00000315869 ONECUT3O60422 494 aaPredicted RBP16.6■□□□□ 0.25
TFE3-201ENST00000315869 EEF1GP26641 437 aaKnown RBP16.6■□□□□ 0.25
TFE3-201ENST00000315869 ARID5AQ03989 594 aa16.6■□□□□ 0.25
TFE3-201ENST00000315869 STK4Q13043 487 aa16.6■□□□□ 0.25
TFE3-201ENST00000315869 MUM1L1Q5H9M0 696 aa16.6■□□□□ 0.25
TFE3-201ENST00000315869 CACNA2D4Q7Z3S7 1137 aa16.6■□□□□ 0.25
TFE3-201ENST00000315869 COL5A3P25940 1745 aaPredicted RBP16.59■□□□□ 0.25
TFE3-201ENST00000315869 MAPKAPK5Q8IW41 473 aa16.59■□□□□ 0.25
TFE3-201ENST00000315869 TGFBRAP1Q8WUH2 860 aa16.59■□□□□ 0.25
TFE3-201ENST00000315869 MLXIPQ9HAP2 919 aa16.59■□□□□ 0.25
TFE3-201ENST00000315869 TUBBP07437 444 aa16.59■□□□□ 0.25
TFE3-201ENST00000315869 DOK7Q18PE1 504 aa16.59■□□□□ 0.25
TFE3-201ENST00000315869 ARL6IP4Q66PJ3 421 aaKnown RBP16.59■□□□□ 0.25
TFE3-201ENST00000315869 ANKRD40Q6AI12 368 aa16.59■□□□□ 0.25
TFE3-201ENST00000315869 TRAPPC11Q7Z392 1133 aa16.59■□□□□ 0.25
TFE3-201ENST00000315869 COL23A1Q86Y22 540 aaPredicted RBP16.59■□□□□ 0.25
TFE3-201ENST00000315869 IFIH1Q9BYX4 1025 aaKnown RBP16.59■□□□□ 0.25
TFE3-201ENST00000315869 ANKRD2Q9GZV1 360 aa16.59■□□□□ 0.25
TFE3-201ENST00000315869 CAPN11Q9UMQ6 739 aa16.59■□□□□ 0.25
TFE3-201ENST00000315869 TACC1O75410 805 aa16.58■□□□□ 0.25
TFE3-201ENST00000315869 GGCXP38435 758 aa16.58■□□□□ 0.25
TFE3-201ENST00000315869 WDR59Q6PJI9 974 aa16.58■□□□□ 0.25
TFE3-201ENST00000315869 P2RX5Q93086 422 aa16.58■□□□□ 0.25
TFE3-201ENST00000315869 ZHX3Q9H4I2 956 aa16.58■□□□□ 0.25
TFE3-201ENST00000315869 BIN2Q9UBW5 565 aaPredicted RBP16.58■□□□□ 0.25
TFE3-201ENST00000315869 MCM3P25205 808 aa16.58■□□□□ 0.24
TFE3-201ENST00000315869 AMPD2Q01433 879 aa16.58■□□□□ 0.24
TFE3-201ENST00000315869 NAALADL2Q58DX5 795 aa16.58■□□□□ 0.24
TFE3-201ENST00000315869 RRAGAQ7L523 313 aa16.58■□□□□ 0.24
TFE3-201ENST00000315869 POLD4Q9HCU8 107 aa16.58■□□□□ 0.24
TFE3-201ENST00000315869 MOCS3O95396 460 aa16.58■□□□□ 0.24
TFE3-201ENST00000315869 SRLQ86TD4 932 aa16.58■□□□□ 0.24
TFE3-201ENST00000315869 ZNF622Q969S3 477 aaKnown RBP eCLIP16.58■□□□□ 0.24
TFE3-201ENST00000315869 CALML4Q96GE6 196 aa16.58■□□□□ 0.24
TFE3-201ENST00000315869 MED4Q9NPJ6 270 aa16.58■□□□□ 0.24
TFE3-201ENST00000315869 NLRC4Q9NPP4 1024 aa16.58■□□□□ 0.24
TFE3-201ENST00000315869 SLURP2P0DP57 97 aa16.57■□□□□ 0.24
TFE3-201ENST00000315869 FAM114A1Q8IWE2 563 aa16.57■□□□□ 0.24
TFE3-201ENST00000315869 UBA5Q9GZZ9 404 aa16.57■□□□□ 0.24
TFE3-201ENST00000315869 EHD2Q9NZN4 543 aa16.57■□□□□ 0.24
TFE3-201ENST00000315869 BICDL2A1A5D9 508 aa16.57■□□□□ 0.24
TFE3-201ENST00000315869 GOLGA6BA6NDN3 693 aa16.57■□□□□ 0.24
TFE3-201ENST00000315869 KLRF2D3W0D1 207 aa16.57■□□□□ 0.24
TFE3-201ENST00000315869 BUB1O43683 1085 aa16.57■□□□□ 0.24
TFE3-201ENST00000315869 EZH2Q15910 746 aaKnown RBP16.57■□□□□ 0.24
TFE3-201ENST00000315869 SH3RF3Q8TEJ3 882 aaPredicted RBP16.57■□□□□ 0.24
TFE3-201ENST00000315869 THAP9Q9H5L6 903 aa16.57■□□□□ 0.24
TFE3-201ENST00000315869 ATP8A2Q9NTI2 1148 aa16.57■□□□□ 0.24
TFE3-201ENST00000315869 ARPP21Q9UBL0 812 aaPredicted RBP16.57■□□□□ 0.24
TFE3-201ENST00000315869 POLLQ9UGP5 575 aa16.57■□□□□ 0.24
TFE3-201ENST00000315869 NID2Q14112 1375 aa16.57■□□□□ 0.24
TFE3-201ENST00000315869 TULP2O00295 520 aa16.57■□□□□ 0.24
TFE3-201ENST00000315869 PDE2AO00408 941 aaPredicted RBP16.57■□□□□ 0.24
TFE3-201ENST00000315869 LDHBP07195 334 aaKnown RBP16.57■□□□□ 0.24
TFE3-201ENST00000315869 MMP10P09238 476 aa16.57■□□□□ 0.24
TFE3-201ENST00000315869 MYBL2P10244 700 aa16.57■□□□□ 0.24
TFE3-201ENST00000315869 LRRC41Q15345 812 aa16.57■□□□□ 0.24
TFE3-201ENST00000315869 IQCEQ6IPM2 695 aa16.57■□□□□ 0.24
TFE3-201ENST00000315869 SELENOOQ9BVL4 669 aa16.57■□□□□ 0.24
TFE3-201ENST00000315869 SEC63Q9UGP8 760 aaKnown RBP16.57■□□□□ 0.24
TFE3-201ENST00000315869 GOLGA6CA6NDK9 693 aa16.56■□□□□ 0.24
TFE3-201ENST00000315869 SMCO2A6NFE2 343 aa16.56■□□□□ 0.24
TFE3-201ENST00000315869 GOLGA6DP0CG33 693 aa16.56■□□□□ 0.24
TFE3-201ENST00000315869 CCNE1P24864 410 aa16.56■□□□□ 0.24
TFE3-201ENST00000315869 ZBED6P86452 979 aa16.56■□□□□ 0.24
TFE3-201ENST00000315869 USP17L2Q6R6M4 530 aa16.56■□□□□ 0.24
TFE3-201ENST00000315869 GOLGA6AQ9NYA3 693 aa16.56■□□□□ 0.24
TFE3-201ENST00000315869 PCDHA6Q9UN73 950 aa16.56■□□□□ 0.24
TFE3-201ENST00000315869 PCDHA8Q9Y5H6 950 aa16.56■□□□□ 0.24
TFE3-201ENST00000315869 PSMD14O00487 310 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms