RNA–Protein interactions for RNA: ENST00000310169.2

CHRNA9-201, Transcript of cholinergic receptor nicotinic alpha 9 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA9, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9-201ENST00000310169 TRERF1Q96PN7 1200 aa11.28□□□□□ -0.6
CHRNA9-201ENST00000310169 PNMA2Q9UL42 364 aa11.28□□□□□ -0.6
CHRNA9-201ENST00000310169 PLXNB2O15031 1838 aa11.28□□□□□ -0.6
CHRNA9-201ENST00000310169 ZNF536O15090 1300 aa11.28□□□□□ -0.6
CHRNA9-201ENST00000310169 APOBRQ0VD83 1088 aa11.28□□□□□ -0.6
CHRNA9-201ENST00000310169 GRB14Q14449 540 aa11.28□□□□□ -0.6
CHRNA9-201ENST00000310169 CDC37Q16543 378 aaPredicted RBP11.28□□□□□ -0.6
CHRNA9-201ENST00000310169 MORN1Q5T089 497 aa11.28□□□□□ -0.6
CHRNA9-201ENST00000310169 CCDC183Q5T5S1 534 aa11.28□□□□□ -0.6
CHRNA9-201ENST00000310169 HOMER1Q86YM7 354 aa11.28□□□□□ -0.6
CHRNA9-201ENST00000310169 ABRAQ8N0Z2 381 aa11.28□□□□□ -0.6
CHRNA9-201ENST00000310169 SLAIN1Q8ND83 568 aa11.28□□□□□ -0.6
CHRNA9-201ENST00000310169 CHST13Q8NET6 341 aa11.28□□□□□ -0.6
CHRNA9-201ENST00000310169 SH3TC2Q8TF17 1288 aa11.28□□□□□ -0.6
CHRNA9-201ENST00000310169 ABHD8Q96I13 439 aa11.28□□□□□ -0.6
CHRNA9-201ENST00000310169 ACAD9Q9H845 621 aa11.28□□□□□ -0.6
CHRNA9-201ENST00000310169 RNF146Q9NTX7 359 aa11.28□□□□□ -0.6
CHRNA9-201ENST00000310169 PDRG1Q9NUG6 133 aa11.28□□□□□ -0.6
CHRNA9-201ENST00000310169 ATP6V1DQ9Y5K8 247 aa11.28□□□□□ -0.6
CHRNA9-201ENST00000310169 SYCE3A1L190 88 aa11.27□□□□□ -0.61
CHRNA9-201ENST00000310169 MYCP01106 439 aaPredicted RBP11.27□□□□□ -0.61
CHRNA9-201ENST00000310169 PTMAP06454 111 aaKnown RBP11.27□□□□□ -0.61
CHRNA9-201ENST00000310169 ELNP15502 786 aa11.27□□□□□ -0.61
CHRNA9-201ENST00000310169 FAM193AP78312 1265 aa11.27□□□□□ -0.61
CHRNA9-201ENST00000310169 TKFCQ3LXA3 575 aa11.27□□□□□ -0.61
CHRNA9-201ENST00000310169 USH1GQ495M9 461 aa11.27□□□□□ -0.61
CHRNA9-201ENST00000310169 CCDC82Q8N4S0 544 aa11.27□□□□□ -0.61
CHRNA9-201ENST00000310169 LZTS2Q9BRK4 669 aa11.27□□□□□ -0.61
CHRNA9-201ENST00000310169 JMJD4Q9H9V9 463 aa11.27□□□□□ -0.61
CHRNA9-201ENST00000310169 FOXD4L1Q9NU39 408 aa11.27□□□□□ -0.61
CHRNA9-201ENST00000310169 CCDC85CA6NKD9 419 aa11.26□□□□□ -0.61
CHRNA9-201ENST00000310169 XRCC5P13010 732 aaKnown RBP11.26□□□□□ -0.61
CHRNA9-201ENST00000310169 PXYLP1Q8TE99 480 aa11.26□□□□□ -0.61
CHRNA9-201ENST00000310169 TMX3Q96JJ7 454 aa11.26□□□□□ -0.61
CHRNA9-201ENST00000310169 APBA2Q99767 749 aa11.26□□□□□ -0.61
CHRNA9-201ENST00000310169 BCCIPQ9P287 314 aaKnown RBP eCLIP11.26□□□□□ -0.61
CHRNA9-201ENST00000310169 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.26□□□□□ -0.61
CHRNA9-201ENST00000310169 KIAA0100Q14667 2235 aaKnown RBP11.26□□□□□ -0.61
CHRNA9-201ENST00000310169 GOLGA8AA7E2F4 631 aa11.26□□□□□ -0.61
CHRNA9-201ENST00000310169 GOLGA8BA8MQT2 603 aa11.26□□□□□ -0.61
CHRNA9-201ENST00000310169 PGK2P07205 417 aa11.26□□□□□ -0.61
CHRNA9-201ENST00000310169 UBXN2AP68543 259 aa11.26□□□□□ -0.61
CHRNA9-201ENST00000310169 RTN1Q16799 776 aa11.26□□□□□ -0.61
CHRNA9-201ENST00000310169 QRICH1Q2TAL8 776 aa11.26□□□□□ -0.61
CHRNA9-201ENST00000310169 FBXO11Q86XK2 927 aa11.26□□□□□ -0.61
CHRNA9-201ENST00000310169 TRMT44Q8IYL2 757 aaKnown RBP11.26□□□□□ -0.61
CHRNA9-201ENST00000310169 CMTR1Q8N1G2 835 aaKnown RBP11.26□□□□□ -0.61
CHRNA9-201ENST00000310169 RBM28Q9NW13 759 aaKnown RBP11.26□□□□□ -0.61
CHRNA9-201ENST00000310169 CCDC196A0A1B0GTZ2 297 aa11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 ZBTB5O15062 677 aa11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 METAP2P50579 478 aaKnown RBP eCLIP11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 NSMFQ6X4W1 530 aa11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 FBXL16Q8N461 479 aa11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 PDCL2Q8N4E4 241 aa11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 USP6NLQ92738 828 aa11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 RRP36Q96EU6 259 aaKnown RBP11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 AMNQ9BXJ7 453 aa11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 RIOX1Q9H6W3 641 aa11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 RNF216Q9NWF9 866 aaPredicted RBP11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 SEC63Q9UGP8 760 aaKnown RBP11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 ZHX1Q9UKY1 873 aaPredicted RBP11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 KIF3AQ9Y496 699 aa11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 GOLGA6L6A8MZA4 724 aa11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 COBLO75128 1261 aa11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 PLEKHA8P1O95397 391 aa11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 TAL1P17542 331 aaPredicted RBP11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 NEK4P51957 841 aa11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 TRAF1Q13077 416 aa11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 NOLC1Q14978 699 aaKnown RBP eCLIP11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 PPP2R5BQ15173 497 aa11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 MUM1L1Q5H9M0 696 aa11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 PIGSQ96S52 555 aa11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 LARP6Q9BRS8 491 aaKnown RBP11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 AGXT2Q9BYV1 514 aa11.25□□□□□ -0.61
CHRNA9-201ENST00000310169 PNMA6FA0A0J9YX94 578 aa11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 PTPDC1A2A3K4 754 aa11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 CYTH3O43739 400 aa11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 HMGCRP04035 888 aa11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 HOXC6P09630 235 aa11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 SMARCA1P28370 1054 aa11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 ANKRD1Q15327 319 aa11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 CCL14Q16627 93 aa11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 CREBRFQ8IUR6 639 aa11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 SRBD1Q8N5C6 995 aaKnown RBP11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 NPLOC4Q8TAT6 608 aa11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 SPZ1Q9BXG8 430 aa11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 PCDHA1Q9Y5I3 950 aa11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 PFASO15067 1338 aa11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 ABCB11O95342 1321 aa11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 PLXNA1Q9UIW2 1896 aa11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 POTEB2H3BUK9 544 aa11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 INHAP05111 366 aa11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 RCAN1P53805 252 aa11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 UBE2HP62256 183 aa11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 TOB2Q14106 344 aaPredicted RBP11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 MFSD14CQ5VZR4 134 aa11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 TRIB2Q92519 343 aa11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 ARMC5Q96C12 935 aa11.24□□□□□ -0.61
CHRNA9-201ENST00000310169 TMEM106CQ9BVX2 250 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms