RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 NSUN7Q8NE18 718 aaKnown RBP10.3□□□□□ -0.76
PTPRE-202ENST00000306042 RPS6KC1Q96S38 1066 aa10.3□□□□□ -0.76
PTPRE-202ENST00000306042 INO80B-WBP1J3KQ70 363 aa10.3□□□□□ -0.76
PTPRE-202ENST00000306042 K7ENM7 598 aa10.3□□□□□ -0.76
PTPRE-202ENST00000306042 CYP2B6P20813 491 aa10.3□□□□□ -0.76
PTPRE-202ENST00000306042 SETQ01105 290 aaPredicted RBP10.3□□□□□ -0.76
PTPRE-202ENST00000306042 MTMR1Q13613 665 aa10.3□□□□□ -0.76
PTPRE-202ENST00000306042 LRSAM1Q6UWE0 723 aa10.3□□□□□ -0.76
PTPRE-202ENST00000306042 ADGRF4Q8IZF3 695 aa10.3□□□□□ -0.76
PTPRE-202ENST00000306042 INO80BQ9C086 356 aaPredicted RBP10.3□□□□□ -0.76
PTPRE-202ENST00000306042 PCDHA6Q9UN73 950 aa10.3□□□□□ -0.76
PTPRE-202ENST00000306042 KIAA1024Q9UPX6 916 aa10.3□□□□□ -0.76
PTPRE-202ENST00000306042 PCDHA8Q9Y5H6 950 aa10.3□□□□□ -0.76
PTPRE-202ENST00000306042 COL4A3BPQ9Y5P4 624 aa10.3□□□□□ -0.76
PTPRE-202ENST00000306042 NRXN3Q9Y4C0 1643 aa10.3□□□□□ -0.76
PTPRE-202ENST00000306042 ZSCAN12O43309 604 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 ZNF202O95125 648 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 ARID5AQ03989 594 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 NFIAQ12857 509 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 NEDD9Q14511 834 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 CCDC117Q8IWD4 279 aaPredicted RBP10.29□□□□□ -0.76
PTPRE-202ENST00000306042 TTC12Q9H892 705 aaPredicted RBP10.29□□□□□ -0.76
PTPRE-202ENST00000306042 WNT10BO00744 389 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 FGFR2P21802 821 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 LONP1P36776 959 aaKnown RBP10.29□□□□□ -0.76
PTPRE-202ENST00000306042 ZNF354CQ86Y25 554 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 PRPF6O94906 941 aaKnown RBP10.29□□□□□ -0.76
PTPRE-202ENST00000306042 TNNI1P19237 187 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 MARK3P27448 753 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 FCGRTP55899 365 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 FERMT1Q9BQL6 677 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 SH3GLB2Q9NR46 395 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 PIK3C2AO00443 1686 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 SLC25A27O95847 323 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 MMP1P03956 469 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 CAP2P40123 477 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 CDR1P51861 262 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 MTERF2Q49AM1 385 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 USP17L6PQ6QN14 398 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 FAM83AQ86UY5 434 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 CSGALNACT2Q8N6G5 542 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 NLGN2Q8NFZ4 835 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 NLRP7Q8WX94 980 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 NACC1Q96RE7 527 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 ARGLU1Q9NWB6 273 aaPredicted RBP10.29□□□□□ -0.76
PTPRE-202ENST00000306042 CTNND2Q9UQB3 1225 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 FAM205AQ6ZU69 1335 aa10.29□□□□□ -0.76
PTPRE-202ENST00000306042 KRT5P13647 590 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 DNA2P51530 1060 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 GSDMDP57764 484 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 RAPGEF1Q13905 1077 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 DACT2Q5SW24 774 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 CLEC10AQ8IUN9 316 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 FAM200AQ8TCP9 573 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 CTNNBL1Q8WYA6 563 aaPredicted RBP10.28□□□□□ -0.76
PTPRE-202ENST00000306042 NUDT12Q9BQG2 462 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 GPRC5DQ9NZD1 345 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 WDR19Q8NEZ3 1342 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 PPM1FP49593 454 aaPredicted RBP10.28□□□□□ -0.76
PTPRE-202ENST00000306042 UBXN1Q04323 297 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 IQCEQ6IPM2 695 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 PPP1R18Q6NYC8 613 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 FMNL3Q8IVF7 1028 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 PLCD3Q8N3E9 789 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 FAM49AQ9H0Q0 323 aaPredicted RBP10.28□□□□□ -0.76
PTPRE-202ENST00000306042 NR2E3Q9Y5X4 410 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 TMCO5BA8MYB1 307 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 ADM5C9JUS6 153 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 STX10O60499 249 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 RCAN1P53805 252 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 TYRO3Q06418 890 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 NR5A1Q13285 461 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 TKFCQ3LXA3 575 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 MB21D2Q8IYB1 491 aaPredicted RBP10.28□□□□□ -0.76
PTPRE-202ENST00000306042 USP28Q96RU2 1077 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 ZBED2Q9BTP6 218 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 APOL6Q9BWW8 343 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 FTOQ9C0B1 505 aaKnown RBP eCLIP10.28□□□□□ -0.76
PTPRE-202ENST00000306042 POSTNQ15063 836 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 ZSCAN23Q3MJ62 389 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 SPDYE2Q495Y8 402 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 ZFP91Q96JP5 570 aaPredicted RBP10.28□□□□□ -0.76
PTPRE-202ENST00000306042 BLZF1Q9H2G9 400 aa10.28□□□□□ -0.76
PTPRE-202ENST00000306042 RASA1P20936 1047 aa10.27□□□□□ -0.76
PTPRE-202ENST00000306042 CASP7P55210 303 aa10.27□□□□□ -0.76
PTPRE-202ENST00000306042 C7orf31Q8N865 590 aa10.27□□□□□ -0.76
PTPRE-202ENST00000306042 RDH13Q8NBN7 331 aa10.27□□□□□ -0.76
PTPRE-202ENST00000306042 NOC4LQ9BVI4 516 aaKnown RBP10.27□□□□□ -0.76
PTPRE-202ENST00000306042 LY9Q9HBG7 655 aa10.27□□□□□ -0.76
PTPRE-202ENST00000306042 KIF5CO60282 957 aa10.27□□□□□ -0.77
PTPRE-202ENST00000306042 P4HA1P13674 534 aa10.27□□□□□ -0.77
PTPRE-202ENST00000306042 PFKFB3Q16875 520 aaPredicted RBP10.27□□□□□ -0.77
PTPRE-202ENST00000306042 CHADLQ6NUI6 762 aa10.27□□□□□ -0.77
PTPRE-202ENST00000306042 MKRN1Q9UHC7 482 aaKnown RBP10.27□□□□□ -0.77
PTPRE-202ENST00000306042 KBTBD13C9JR72 458 aa10.27□□□□□ -0.77
PTPRE-202ENST00000306042 JAK3P52333 1124 aa10.27□□□□□ -0.77
PTPRE-202ENST00000306042 RNASELQ05823 741 aaKnown RBP10.27□□□□□ -0.77
PTPRE-202ENST00000306042 PAK1Q13153 545 aa10.27□□□□□ -0.77
PTPRE-202ENST00000306042 OPTNQ96CV9 577 aa10.27□□□□□ -0.77
PTPRE-202ENST00000306042 FAM167AQ96KS9 214 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms