RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 GHRHRQ02643 423 aa31.13■■■□□ 2.57
HDAC3-201ENST00000305264 GALNT17Q6IS24 598 aa31.13■■■□□ 2.57
HDAC3-201ENST00000305264 RNF207Q6ZRF8 634 aa31.13■■■□□ 2.57
HDAC3-201ENST00000305264 DHX30Q7L2E3 1194 aaKnown RBP eCLIP31.13■■■□□ 2.57
HDAC3-201ENST00000305264 GPR142Q7Z601 462 aa31.13■■■□□ 2.57
HDAC3-201ENST00000305264 CYP39A1Q9NYL5 469 aa31.13■■■□□ 2.57
HDAC3-201ENST00000305264 MTMR6Q9Y217 621 aa31.13■■■□□ 2.57
HDAC3-201ENST00000305264 ZNFX1Q9P2E3 1918 aaKnown RBP31.13■■■□□ 2.57
HDAC3-201ENST00000305264 GCOM1H8Y6P7 765 aaPredicted RBP31.12■■■□□ 2.57
HDAC3-201ENST00000305264 POLR2MP0CAP2 368 aa31.12■■■□□ 2.57
HDAC3-201ENST00000305264 CTGFP29279 349 aa31.12■■■□□ 2.57
HDAC3-201ENST00000305264 KRT2P35908 639 aa31.12■■■□□ 2.57
HDAC3-201ENST00000305264 NR5A1Q13285 461 aa31.12■■■□□ 2.57
HDAC3-201ENST00000305264 REXO1Q8N1G1 1221 aaKnown RBP31.12■■■□□ 2.57
HDAC3-201ENST00000305264 ANKRD35Q8N283 1001 aa31.12■■■□□ 2.57
HDAC3-201ENST00000305264 RGS22Q8NE09 1264 aa31.12■■■□□ 2.57
HDAC3-201ENST00000305264 TMEM260Q9NX78 707 aa31.12■■■□□ 2.57
HDAC3-201ENST00000305264 BIN2Q9UBW5 565 aaPredicted RBP31.12■■■□□ 2.57
HDAC3-201ENST00000305264 BTBD18B2RXH4 712 aa31.12■■■□□ 2.57
HDAC3-201ENST00000305264 M0R2N6 131 aa31.12■■■□□ 2.57
HDAC3-201ENST00000305264 PIK3CDO00329 1044 aa31.12■■■□□ 2.57
HDAC3-201ENST00000305264 CLK2P49760 499 aaKnown RBP31.12■■■□□ 2.57
HDAC3-201ENST00000305264 BAATQ14032 418 aaPredicted RBP31.12■■■□□ 2.57
HDAC3-201ENST00000305264 MMP19Q99542 508 aa31.12■■■□□ 2.57
HDAC3-201ENST00000305264 GLT8D2Q9H1C3 349 aa31.12■■■□□ 2.57
HDAC3-201ENST00000305264 GPR25O00155 361 aa31.11■■■□□ 2.57
HDAC3-201ENST00000305264 LACTBP83111 547 aaPredicted RBP31.11■■■□□ 2.57
HDAC3-201ENST00000305264 SP3Q02447 781 aa31.11■■■□□ 2.57
HDAC3-201ENST00000305264 BICD2Q8TD16 824 aa31.11■■■□□ 2.57
HDAC3-201ENST00000305264 ARHGAP39Q9C0H5 1083 aa31.11■■■□□ 2.57
HDAC3-201ENST00000305264 COL20A1Q9P218 1284 aa31.11■■■□□ 2.57
HDAC3-201ENST00000305264 KIF28PB7ZC32 967 aa31.1■■■□□ 2.57
HDAC3-201ENST00000305264 SAFBQ15424 915 aaKnown RBP eCLIP31.1■■■□□ 2.57
HDAC3-201ENST00000305264 BRMS1Q9HCU9 246 aa31.1■■■□□ 2.57
HDAC3-201ENST00000305264 PCDHA6Q9UN73 950 aa31.1■■■□□ 2.57
HDAC3-201ENST00000305264 PCDHA8Q9Y5H6 950 aa31.1■■■□□ 2.57
HDAC3-201ENST00000305264 PFASO15067 1338 aa31.1■■■□□ 2.57
HDAC3-201ENST00000305264 FCER1AP12319 257 aa31.1■■■□□ 2.57
HDAC3-201ENST00000305264 KCTD2Q14681 263 aa31.1■■■□□ 2.57
HDAC3-201ENST00000305264 NOM1Q5C9Z4 860 aaKnown RBP31.1■■■□□ 2.57
HDAC3-201ENST00000305264 JAKMIP3Q5VZ66 844 aa31.1■■■□□ 2.57
HDAC3-201ENST00000305264 MCTP1Q6DN14 999 aa31.1■■■□□ 2.57
HDAC3-201ENST00000305264 PLEKHH3Q7Z736 793 aa31.1■■■□□ 2.57
HDAC3-201ENST00000305264 SYTL5Q8TDW5 730 aaPredicted RBP31.1■■■□□ 2.57
HDAC3-201ENST00000305264 ZNF236Q9UL36 1845 aa31.09■■■□□ 2.57
HDAC3-201ENST00000305264 CAP1Q01518 475 aa31.09■■■□□ 2.57
HDAC3-201ENST00000305264 JMYQ8N9B5 988 aa31.09■■■□□ 2.57
HDAC3-201ENST00000305264 TNFRSF25Q93038 417 aa31.09■■■□□ 2.57
HDAC3-201ENST00000305264 PGBD1Q96JS3 809 aa31.09■■■□□ 2.57
HDAC3-201ENST00000305264 PURBQ96QR8 312 aaKnown RBP31.09■■■□□ 2.57
HDAC3-201ENST00000305264 IVNS1ABPQ9Y6Y0 642 aa31.09■■■□□ 2.57
HDAC3-201ENST00000305264 FCHSD1Q86WN1 690 aa31.08■■■□□ 2.57
HDAC3-201ENST00000305264 PGK2P07205 417 aa31.08■■■□□ 2.57
HDAC3-201ENST00000305264 FERMT3Q86UX7 667 aa31.08■■■□□ 2.57
HDAC3-201ENST00000305264 PTPREP23469 700 aa31.07■■■□□ 2.56
HDAC3-201ENST00000305264 GRB14Q14449 540 aa31.07■■■□□ 2.56
HDAC3-201ENST00000305264 FOXD4L5Q5VV16 416 aaPredicted RBP31.07■■■□□ 2.56
HDAC3-201ENST00000305264 FOXD4L4Q8WXT5 416 aaPredicted RBP31.07■■■□□ 2.56
HDAC3-201ENST00000305264 TRIM47Q96LD4 638 aa31.07■■■□□ 2.56
HDAC3-201ENST00000305264 MAP3K20Q9NYL2 800 aaKnown RBP31.07■■■□□ 2.56
HDAC3-201ENST00000305264 ADORA2AP29274 412 aa31.06■■■□□ 2.56
HDAC3-201ENST00000305264 PSMC4P43686 418 aa31.06■■■□□ 2.56
HDAC3-201ENST00000305264 EARS2Q5JPH6 523 aaKnown RBP31.06■■■□□ 2.56
HDAC3-201ENST00000305264 SAMD3Q8N6K7 520 aa31.06■■■□□ 2.56
HDAC3-201ENST00000305264 FOXP1Q9H334 677 aaPredicted RBP31.06■■■□□ 2.56
HDAC3-201ENST00000305264 PLXNA1Q9UIW2 1896 aa31.06■■■□□ 2.56
HDAC3-201ENST00000305264 TNPO2O14787 897 aaKnown RBP31.06■■■□□ 2.56
HDAC3-201ENST00000305264 STRNO43815 780 aa31.06■■■□□ 2.56
HDAC3-201ENST00000305264 CNTN2Q02246 1040 aa31.06■■■□□ 2.56
HDAC3-201ENST00000305264 TEX2Q8IWB9 1127 aa31.06■■■□□ 2.56
HDAC3-201ENST00000305264 ABRAQ8N0Z2 381 aa31.06■■■□□ 2.56
HDAC3-201ENST00000305264 MAF1Q9H063 256 aa31.06■■■□□ 2.56
HDAC3-201ENST00000305264 ZDHHC9Q9Y397 364 aa31.06■■■□□ 2.56
HDAC3-201ENST00000305264 FAM205CA6NFA0 338 aa31.05■■■□□ 2.56
HDAC3-201ENST00000305264 U2AF2P26368 475 aaKnown RBP eCLIP31.05■■■□□ 2.566e-7■■■■■ 29.6
HDAC3-201ENST00000305264 FCGRTP55899 365 aa31.05■■■□□ 2.56
HDAC3-201ENST00000305264 GNL2Q13823 731 aaKnown RBP31.05■■■□□ 2.56
HDAC3-201ENST00000305264 ZNF296Q8WUU4 475 aaPredicted RBP31.05■■■□□ 2.56
HDAC3-201ENST00000305264 DNAJC25-GNG10A0A024R161 153 aa31.05■■■□□ 2.56
HDAC3-201ENST00000305264 AP3B2Q13367 1082 aa31.05■■■□□ 2.56
HDAC3-201ENST00000305264 CD99L2Q8TCZ2 262 aa31.05■■■□□ 2.56
HDAC3-201ENST00000305264 ANO3Q9BYT9 981 aa31.05■■■□□ 2.56
HDAC3-201ENST00000305264 MYH7BA7E2Y1 1941 aa31.04■■■□□ 2.56
HDAC3-201ENST00000305264 SPDYE3A6NKU9 549 aa31.04■■■□□ 2.56
HDAC3-201ENST00000305264 BRD1O95696 1058 aa31.04■■■□□ 2.56
HDAC3-201ENST00000305264 ZSCAN22P10073 491 aaPredicted RBP31.04■■■□□ 2.56
HDAC3-201ENST00000305264 TAAR1Q96RJ0 339 aa31.04■■■□□ 2.56
HDAC3-201ENST00000305264 ASTN1O14525 1302 aa31.04■■■□□ 2.56
HDAC3-201ENST00000305264 SLC15A5A6NIM6 579 aa31.03■■■□□ 2.56
HDAC3-201ENST00000305264 POTEB2H3BUK9 544 aa31.03■■■□□ 2.56
HDAC3-201ENST00000305264 PDIA4P13667 645 aaKnown RBP31.03■■■□□ 2.56
HDAC3-201ENST00000305264 MORN1Q5T089 497 aa31.03■■■□□ 2.56
HDAC3-201ENST00000305264 PIK3AP1Q6ZUJ8 805 aa31.03■■■□□ 2.56
HDAC3-201ENST00000305264 NOSTRINQ8IVI9 506 aa31.03■■■□□ 2.56
HDAC3-201ENST00000305264 FAM133AQ8N9E0 248 aa31.03■■■□□ 2.56
HDAC3-201ENST00000305264 FKTNO75072 461 aa31.03■■■□□ 2.56
HDAC3-201ENST00000305264 RESTQ13127 1097 aa31.03■■■□□ 2.56
HDAC3-201ENST00000305264 COBLO75128 1261 aa31.02■■■□□ 2.56
HDAC3-201ENST00000305264 KIF22Q14807 665 aa31.02■■■□□ 2.56
HDAC3-201ENST00000305264 KRT25Q7Z3Z0 450 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms