RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 APBA2Q99767 749 aa28.18■■■□□ 2.1
HOXC9-201ENST00000303450 PSTPIP2Q9H939 334 aa28.18■■■□□ 2.1
HOXC9-201ENST00000303450 PTPN22Q9Y2R2 807 aa28.18■■■□□ 2.1
HOXC9-201ENST00000303450 DNAJC25-GNG10A0A024R161 153 aa28.17■■■□□ 2.1
HOXC9-201ENST00000303450 HOXC6P09630 235 aa28.17■■■□□ 2.1
HOXC9-201ENST00000303450 FDPSP14324 419 aaKnown RBP28.17■■■□□ 2.1
HOXC9-201ENST00000303450 HMGN5P82970 282 aaKnown RBP28.17■■■□□ 2.1
HOXC9-201ENST00000303450 IRF5Q13568 498 aa28.17■■■□□ 2.1
HOXC9-201ENST00000303450 SAMD3Q8N6K7 520 aa28.17■■■□□ 2.1
HOXC9-201ENST00000303450 SMARCC2Q8TAQ2 1214 aa28.17■■■□□ 2.1
HOXC9-201ENST00000303450 RBBP6Q7Z6E9 1792 aaKnown RBP28.17■■■□□ 2.1
HOXC9-201ENST00000303450 GCOM1H8Y6P7 765 aaPredicted RBP28.16■■■□□ 2.1
HOXC9-201ENST00000303450 POLR2MP0CAP2 368 aa28.16■■■□□ 2.1
HOXC9-201ENST00000303450 XRCC5P13010 732 aaKnown RBP28.16■■■□□ 2.1
HOXC9-201ENST00000303450 PKN2Q16513 984 aaKnown RBP28.16■■■□□ 2.1
HOXC9-201ENST00000303450 CCDC148Q8NFR7 591 aa28.16■■■□□ 2.1
HOXC9-201ENST00000303450 CUL5Q93034 780 aa28.16■■■□□ 2.1
HOXC9-201ENST00000303450 AIFM3Q96NN9 605 aa28.16■■■□□ 2.1
HOXC9-201ENST00000303450 SH3GLB2Q9NR46 395 aa28.16■■■□□ 2.1
HOXC9-201ENST00000303450 MAP3K20Q9NYL2 800 aaKnown RBP28.16■■■□□ 2.1
HOXC9-201ENST00000303450 VPS54Q9P1Q0 977 aa28.16■■■□□ 2.1
HOXC9-201ENST00000303450 SMCO2A6NFE2 343 aa28.15■■■□□ 2.1
HOXC9-201ENST00000303450 CNTN2Q02246 1040 aa28.15■■■□□ 2.1
HOXC9-201ENST00000303450 ZNF792Q3KQV3 632 aa28.15■■■□□ 2.1
HOXC9-201ENST00000303450 NPLOC4Q8TAT6 608 aa28.15■■■□□ 2.1
HOXC9-201ENST00000303450 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.15■■■□□ 2.1
HOXC9-201ENST00000303450 PTCH2Q9Y6C5 1203 aa28.15■■■□□ 2.1
HOXC9-201ENST00000303450 XBP1P17861 261 aa28.14■■■□□ 2.1
HOXC9-201ENST00000303450 HOXA13P31271 388 aaPredicted RBP28.14■■■□□ 2.1
HOXC9-201ENST00000303450 HSD17B4P51659 736 aa28.14■■■□□ 2.1
HOXC9-201ENST00000303450 GHRHRQ02643 423 aa28.14■■■□□ 2.1
HOXC9-201ENST00000303450 FAM133AQ8N9E0 248 aa28.14■■■□□ 2.1
HOXC9-201ENST00000303450 ALG1Q9BT22 464 aa28.14■■■□□ 2.1
HOXC9-201ENST00000303450 PLXNA1Q9UIW2 1896 aa28.14■■■□□ 2.1
HOXC9-201ENST00000303450 DIS3Q9Y2L1 958 aaKnown RBP28.14■■■□□ 2.1
HOXC9-201ENST00000303450 ADCY3O60266 1144 aa28.13■■■□□ 2.09
HOXC9-201ENST00000303450 ADCY7P51828 1080 aa28.13■■■□□ 2.09
HOXC9-201ENST00000303450 MRPL12P52815 198 aaKnown RBP28.13■■■□□ 2.09
HOXC9-201ENST00000303450 CUL4AQ13619 759 aa28.13■■■□□ 2.09
HOXC9-201ENST00000303450 SYTL5Q8TDW5 730 aaPredicted RBP28.13■■■□□ 2.09
HOXC9-201ENST00000303450 GLT8D2Q9H1C3 349 aa28.13■■■□□ 2.09
HOXC9-201ENST00000303450 RIC8AQ9NPQ8 531 aa28.13■■■□□ 2.09
HOXC9-201ENST00000303450 FBXO46Q6PJ61 603 aaPredicted RBP28.13■■■□□ 2.09
HOXC9-201ENST00000303450 USP17L6PQ6QN14 398 aa28.13■■■□□ 2.09
HOXC9-201ENST00000303450 FAM184AQ8NB25 1140 aa28.13■■■□□ 2.09
HOXC9-201ENST00000303450 MAML3Q96JK9 1138 aa28.13■■■□□ 2.09
HOXC9-201ENST00000303450 ZMYND12Q9H0C1 365 aa28.13■■■□□ 2.09
HOXC9-201ENST00000303450 C6orf50Q9HD87 102 aa28.13■■■□□ 2.09
HOXC9-201ENST00000303450 ADD3Q9UEY8 706 aaKnown RBP28.13■■■□□ 2.09
HOXC9-201ENST00000303450 ESYT2A0FGR8 921 aa28.12■■■□□ 2.09
HOXC9-201ENST00000303450 PIK3CDO00329 1044 aa28.12■■■□□ 2.09
HOXC9-201ENST00000303450 GNA11P29992 359 aa28.12■■■□□ 2.09
HOXC9-201ENST00000303450 NLRP5P59047 1200 aa28.12■■■□□ 2.09
HOXC9-201ENST00000303450 TRMT44Q8IYL2 757 aaKnown RBP28.12■■■□□ 2.09
HOXC9-201ENST00000303450 FAM177A1Q8N128 213 aaPredicted RBP28.12■■■□□ 2.09
HOXC9-201ENST00000303450 PURBQ96QR8 312 aaKnown RBP28.12■■■□□ 2.09
HOXC9-201ENST00000303450 MEIS2O14770 477 aa28.11■■■□□ 2.09
HOXC9-201ENST00000303450 CCL14Q16627 93 aa28.11■■■□□ 2.09
HOXC9-201ENST00000303450 FCHSD1Q86WN1 690 aa28.11■■■□□ 2.09
HOXC9-201ENST00000303450 PXYLP1Q8TE99 480 aa28.11■■■□□ 2.09
HOXC9-201ENST00000303450 SMC3Q9UQE7 1217 aa28.11■■■□□ 2.09
HOXC9-201ENST00000303450 SOWAHBA6NEL2 793 aa28.1■■■□□ 2.09
HOXC9-201ENST00000303450 ELNP15502 786 aa28.1■■■□□ 2.09
HOXC9-201ENST00000303450 TEX2Q8IWB9 1127 aa28.1■■■□□ 2.09
HOXC9-201ENST00000303450 SLAIN1Q8ND83 568 aa28.1■■■□□ 2.09
HOXC9-201ENST00000303450 SHISA4Q96DD7 197 aa28.1■■■□□ 2.09
HOXC9-201ENST00000303450 COL20A1Q9P218 1284 aa28.1■■■□□ 2.09
HOXC9-201ENST00000303450 KIF3AQ9Y496 699 aa28.1■■■□□ 2.09
HOXC9-201ENST00000303450 LCTP09848 1927 aa28.09■■■□□ 2.09
HOXC9-201ENST00000303450 GRK4P32298 578 aa28.09■■■□□ 2.09
HOXC9-201ENST00000303450 UBE2SQ16763 222 aa28.09■■■□□ 2.09
HOXC9-201ENST00000303450 OLFML2BQ68BL8 750 aa28.09■■■□□ 2.09
HOXC9-201ENST00000303450 ZNF467Q7Z7K2 595 aaPredicted RBP28.09■■■□□ 2.09
HOXC9-201ENST00000303450 DNERQ8NFT8 737 aa28.09■■■□□ 2.09
HOXC9-201ENST00000303450 BICD2Q8TD16 824 aa28.09■■■□□ 2.09
HOXC9-201ENST00000303450 TRIB2Q92519 343 aa28.09■■■□□ 2.09
HOXC9-201ENST00000303450 TAAR1Q96RJ0 339 aa28.09■■■□□ 2.09
HOXC9-201ENST00000303450 FLRT1Q9NZU1 646 aa28.09■■■□□ 2.09
HOXC9-201ENST00000303450 TRIM29Q14134 588 aa28.08■■■□□ 2.09
HOXC9-201ENST00000303450 FGD4Q96M96 766 aa28.08■■■□□ 2.09
HOXC9-201ENST00000303450 RMDN3Q96TC7 470 aa28.08■■■□□ 2.09
HOXC9-201ENST00000303450 GJB2P29033 226 aa28.08■■■□□ 2.08
HOXC9-201ENST00000303450 ALDH5A1P51649 535 aaPredicted RBP28.08■■■□□ 2.08
HOXC9-201ENST00000303450 FOSBP53539 338 aa28.08■■■□□ 2.08
HOXC9-201ENST00000303450 NSUN6Q8TEA1 469 aaKnown RBP28.08■■■□□ 2.08
HOXC9-201ENST00000303450 MPHOSPH6Q99547 160 aaKnown RBP28.08■■■□□ 2.08
HOXC9-201ENST00000303450 TINF2Q9BSI4 451 aa28.08■■■□□ 2.08
HOXC9-201ENST00000303450 GJB4Q9NTQ9 266 aa28.08■■■□□ 2.08
HOXC9-201ENST00000303450 KCNJ14Q9UNX9 436 aa28.08■■■□□ 2.08
HOXC9-201ENST00000303450 ASB14A6NK59 587 aa28.07■■■□□ 2.08
HOXC9-201ENST00000303450 SPDYE3A6NKU9 549 aa28.07■■■□□ 2.08
HOXC9-201ENST00000303450 SLC9C1Q4G0N8 1177 aa28.07■■■□□ 2.08
HOXC9-201ENST00000303450 ARHGEF16Q5VV41 709 aa28.07■■■□□ 2.08
HOXC9-201ENST00000303450 MFSD14CQ5VZR4 134 aa28.07■■■□□ 2.08
HOXC9-201ENST00000303450 MSL3Q8N5Y2 521 aaKnown RBP28.07■■■□□ 2.08
HOXC9-201ENST00000303450 INTS4Q96HW7 963 aaKnown RBP28.07■■■□□ 2.08
HOXC9-201ENST00000303450 BIN2Q9UBW5 565 aaPredicted RBP28.07■■■□□ 2.08
HOXC9-201ENST00000303450 ASTN1O14525 1302 aa28.06■■■□□ 2.08
HOXC9-201ENST00000303450 B4DLN1 442 aa28.06■■■□□ 2.08
HOXC9-201ENST00000303450 HMGCRP04035 888 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms