RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 OXER1Q8TDS5 423 aa19.74■□□□□ 0.75
SKP2-201ENST00000274254 CYP39A1Q9NYL5 469 aa19.74■□□□□ 0.75
SKP2-201ENST00000274254 VPS37CA5D8V6 355 aaPredicted RBP19.73■□□□□ 0.75
SKP2-201ENST00000274254 KRT2P35908 639 aa19.73■□□□□ 0.75
SKP2-201ENST00000274254 RPS6P62753 249 aaKnown RBP19.73■□□□□ 0.75
SKP2-201ENST00000274254 SAFBQ15424 915 aaKnown RBP eCLIP19.73■□□□□ 0.75
SKP2-201ENST00000274254 UBE2SQ16763 222 aa19.73■□□□□ 0.75
SKP2-201ENST00000274254 NSMFQ6X4W1 530 aa19.73■□□□□ 0.75
SKP2-201ENST00000274254 RNF207Q6ZRF8 634 aa19.73■□□□□ 0.75
SKP2-201ENST00000274254 CCAR1Q8IX12 1150 aaKnown RBP19.73■□□□□ 0.75
SKP2-201ENST00000274254 ABRAQ8N0Z2 381 aa19.73■□□□□ 0.75
SKP2-201ENST00000274254 REXO1Q8N1G1 1221 aaKnown RBP19.73■□□□□ 0.75
SKP2-201ENST00000274254 BRMS1Q9HCU9 246 aa19.73■□□□□ 0.75
SKP2-201ENST00000274254 PFASO15067 1338 aa19.73■□□□□ 0.75
SKP2-201ENST00000274254 DOCK3Q8IZD9 2030 aa19.72■□□□□ 0.75
SKP2-201ENST00000274254 BTBD18B2RXH4 712 aa19.72■□□□□ 0.75
SKP2-201ENST00000274254 STRNO43815 780 aa19.72■□□□□ 0.75
SKP2-201ENST00000274254 FCER1AP12319 257 aa19.72■□□□□ 0.75
SKP2-201ENST00000274254 U2AF2P26368 475 aaKnown RBP eCLIP19.72■□□□□ 0.75
SKP2-201ENST00000274254 HOXA13P31271 388 aaPredicted RBP19.72■□□□□ 0.75
SKP2-201ENST00000274254 LACTBP83111 547 aaPredicted RBP19.72■□□□□ 0.75
SKP2-201ENST00000274254 BAATQ14032 418 aaPredicted RBP19.72■□□□□ 0.75
SKP2-201ENST00000274254 SLC30A10Q6XR72 485 aa19.72■□□□□ 0.75
SKP2-201ENST00000274254 GPR142Q7Z601 462 aa19.72■□□□□ 0.75
SKP2-201ENST00000274254 JMYQ8N9B5 988 aa19.72■□□□□ 0.75
SKP2-201ENST00000274254 TNFRSF25Q93038 417 aa19.72■□□□□ 0.75
SKP2-201ENST00000274254 MMP19Q99542 508 aa19.72■□□□□ 0.75
SKP2-201ENST00000274254 BEGAINQ9BUH8 593 aa19.72■□□□□ 0.75
SKP2-201ENST00000274254 FOXP1Q9H334 677 aaPredicted RBP19.72■□□□□ 0.75
SKP2-201ENST00000274254 PCDHA6Q9UN73 950 aa19.72■□□□□ 0.75
SKP2-201ENST00000274254 PCDHA8Q9Y5H6 950 aa19.72■□□□□ 0.75
SKP2-201ENST00000274254 GPR25O00155 361 aa19.71■□□□□ 0.75
SKP2-201ENST00000274254 SP3Q02447 781 aa19.71■□□□□ 0.75
SKP2-201ENST00000274254 NR5A1Q13285 461 aa19.71■□□□□ 0.75
SKP2-201ENST00000274254 WDR78Q5VTH9 848 aa19.71■□□□□ 0.75
SKP2-201ENST00000274254 PLEKHH3Q7Z736 793 aa19.71■□□□□ 0.75
SKP2-201ENST00000274254 ANKRD35Q8N283 1001 aa19.71■□□□□ 0.75
SKP2-201ENST00000274254 RASGRP4Q8TDF6 673 aa19.71■□□□□ 0.75
SKP2-201ENST00000274254 SYTL5Q8TDW5 730 aaPredicted RBP19.71■□□□□ 0.75
SKP2-201ENST00000274254 COL20A1Q9P218 1284 aa19.71■□□□□ 0.75
SKP2-201ENST00000274254 BIN2Q9UBW5 565 aaPredicted RBP19.71■□□□□ 0.75
SKP2-201ENST00000274254 PLXNB2O15031 1838 aa19.71■□□□□ 0.75
SKP2-201ENST00000274254 ZNFX1Q9P2E3 1918 aaKnown RBP19.71■□□□□ 0.75
SKP2-201ENST00000274254 DNAJC25-GNG10A0A024R161 153 aa19.71■□□□□ 0.75
SKP2-201ENST00000274254 KIF28PB7ZC32 967 aa19.71■□□□□ 0.75
SKP2-201ENST00000274254 PTPREP23469 700 aa19.71■□□□□ 0.75
SKP2-201ENST00000274254 CTGFP29279 349 aa19.71■□□□□ 0.75
SKP2-201ENST00000274254 AP3B2Q13367 1082 aa19.71■□□□□ 0.75
SKP2-201ENST00000274254 GRB14Q14449 540 aa19.71■□□□□ 0.75
SKP2-201ENST00000274254 KCTD2Q14681 263 aa19.71■□□□□ 0.75
SKP2-201ENST00000274254 TMEM260Q9NX78 707 aa19.71■□□□□ 0.75
SKP2-201ENST00000274254 CIZ1Q9ULV3 898 aaPredicted RBP19.71■□□□□ 0.75
SKP2-201ENST00000274254 MGAMO43451 1857 aa19.71■□□□□ 0.75
SKP2-201ENST00000274254 LCTP09848 1927 aa19.7■□□□□ 0.74
SKP2-201ENST00000274254 ZNF236Q9UL36 1845 aa19.7■□□□□ 0.74
SKP2-201ENST00000274254 BRD1O95696 1058 aa19.7■□□□□ 0.74
SKP2-201ENST00000274254 FOSP01100 380 aaPredicted RBP19.7■□□□□ 0.74
SKP2-201ENST00000274254 MCTP2Q6DN12 878 aa19.7■□□□□ 0.74
SKP2-201ENST00000274254 ZDHHC9Q9Y397 364 aa19.7■□□□□ 0.74
SKP2-201ENST00000274254 IVNS1ABPQ9Y6Y0 642 aa19.7■□□□□ 0.74
SKP2-201ENST00000274254 ZSCAN22P10073 491 aaPredicted RBP19.69■□□□□ 0.74
SKP2-201ENST00000274254 JAKMIP3Q5VZ66 844 aa19.69■□□□□ 0.74
SKP2-201ENST00000274254 MCTP1Q6DN14 999 aa19.69■□□□□ 0.74
SKP2-201ENST00000274254 FCHSD1Q86WN1 690 aa19.69■□□□□ 0.74
SKP2-201ENST00000274254 FAM133AQ8N9E0 248 aa19.69■□□□□ 0.74
SKP2-201ENST00000274254 SLC15A5A6NIM6 579 aa19.68■□□□□ 0.74
SKP2-201ENST00000274254 SPDYE3A6NKU9 549 aa19.68■□□□□ 0.74
SKP2-201ENST00000274254 ADORA2AP29274 412 aa19.68■□□□□ 0.74
SKP2-201ENST00000274254 PSMC4P43686 418 aa19.68■□□□□ 0.74
SKP2-201ENST00000274254 FCGRTP55899 365 aa19.68■□□□□ 0.74
SKP2-201ENST00000274254 NUCB2P80303 420 aa19.68■□□□□ 0.74
SKP2-201ENST00000274254 CAP1Q01518 475 aa19.68■□□□□ 0.74
SKP2-201ENST00000274254 EARS2Q5JPH6 523 aaKnown RBP19.68■□□□□ 0.74
SKP2-201ENST00000274254 MORN1Q5T089 497 aa19.68■□□□□ 0.74
SKP2-201ENST00000274254 KRT25Q7Z3Z0 450 aa19.68■□□□□ 0.74
SKP2-201ENST00000274254 NOSTRINQ8IVI9 506 aa19.68■□□□□ 0.74
SKP2-201ENST00000274254 TRIM47Q96LD4 638 aa19.68■□□□□ 0.74
SKP2-201ENST00000274254 PURBQ96QR8 312 aaKnown RBP19.68■□□□□ 0.74
SKP2-201ENST00000274254 ARHGAP39Q9C0H5 1083 aa19.68■□□□□ 0.74
SKP2-201ENST00000274254 FRMPD4Q14CM0 1322 aa19.68■□□□□ 0.74
SKP2-201ENST00000274254 ZSWIM8A7E2V4 1837 aa19.68■□□□□ 0.74
SKP2-201ENST00000274254 TNPO2O14787 897 aaKnown RBP19.67■□□□□ 0.74
SKP2-201ENST00000274254 RESTQ13127 1097 aa19.67■□□□□ 0.74
SKP2-201ENST00000274254 FERMT3Q86UX7 667 aa19.67■□□□□ 0.74
SKP2-201ENST00000274254 ZNF296Q8WUU4 475 aaPredicted RBP19.67■□□□□ 0.74
SKP2-201ENST00000274254 PGBD1Q96JS3 809 aa19.67■□□□□ 0.74
SKP2-201ENST00000274254 TAAR1Q96RJ0 339 aa19.67■□□□□ 0.74
SKP2-201ENST00000274254 ANO3Q9BYT9 981 aa19.67■□□□□ 0.74
SKP2-201ENST00000274254 TSKSQ9UJT2 592 aa19.67■□□□□ 0.74
SKP2-201ENST00000274254 GJD2Q9UKL4 321 aa19.67■□□□□ 0.74
SKP2-201ENST00000274254 ASTN1O14525 1302 aa19.67■□□□□ 0.74
SKP2-201ENST00000274254 RPTORQ8N122 1335 aa19.67■□□□□ 0.74
SKP2-201ENST00000274254 POTEB2H3BUK9 544 aa19.66■□□□□ 0.74
SKP2-201ENST00000274254 FKTNO75072 461 aa19.66■□□□□ 0.74
SKP2-201ENST00000274254 COBLO75128 1261 aa19.66■□□□□ 0.74
SKP2-201ENST00000274254 F13A1P00488 732 aa19.66■□□□□ 0.74
SKP2-201ENST00000274254 PGK2P07205 417 aa19.66■□□□□ 0.74
SKP2-201ENST00000274254 CNTN2Q02246 1040 aa19.66■□□□□ 0.74
SKP2-201ENST00000274254 GNL2Q13823 731 aaKnown RBP19.66■□□□□ 0.74
SKP2-201ENST00000274254 KIF22Q14807 665 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms