RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 DDX49Q9Y6V7 483 aaKnown RBP14.35□□□□□ -0.11
TRAF4-202ENST00000262396 TMEM265A0A087WTH1 108 aa14.34□□□□□ -0.11
TRAF4-202ENST00000262396 NFIBO00712 420 aa14.34□□□□□ -0.11
TRAF4-202ENST00000262396 GOLGA8HP0CJ92 632 aa14.34□□□□□ -0.11
TRAF4-202ENST00000262396 ACRP10323 421 aa14.34□□□□□ -0.11
TRAF4-202ENST00000262396 DNAJB2P25686 324 aa14.34□□□□□ -0.11
TRAF4-202ENST00000262396 CYP2C18P33260 490 aa14.34□□□□□ -0.11
TRAF4-202ENST00000262396 NT5C2P49902 561 aa14.34□□□□□ -0.11
TRAF4-202ENST00000262396 ZNF543Q08ER8 600 aa14.34□□□□□ -0.11
TRAF4-202ENST00000262396 PPP2R5BQ15173 497 aa14.34□□□□□ -0.11
TRAF4-202ENST00000262396 FAM126BQ8IXS8 530 aa14.34□□□□□ -0.11
TRAF4-202ENST00000262396 TIFAQ96CG3 184 aa14.34□□□□□ -0.11
TRAF4-202ENST00000262396 PURBQ96QR8 312 aaKnown RBP14.34□□□□□ -0.11
TRAF4-202ENST00000262396 UBAC1Q9BSL1 405 aa14.34□□□□□ -0.11
TRAF4-202ENST00000262396 KATNBL1Q9H079 304 aa14.34□□□□□ -0.11
TRAF4-202ENST00000262396 GNEQ9Y223 722 aaKnown RBP14.34□□□□□ -0.11
TRAF4-202ENST00000262396 NOD1Q9Y239 953 aa14.34□□□□□ -0.11
TRAF4-202ENST00000262396 LTBP2Q14767 1821 aa14.34□□□□□ -0.11
TRAF4-202ENST00000262396 LOC102724159A0A0B4J2E5 919 aa14.33□□□□□ -0.12
TRAF4-202ENST00000262396 ZBBXA8MT70 800 aa14.33□□□□□ -0.12
TRAF4-202ENST00000262396 KDM4AO75164 1064 aa14.33□□□□□ -0.12
TRAF4-202ENST00000262396 FGBP02675 491 aa14.33□□□□□ -0.12
TRAF4-202ENST00000262396 SUPT20HL2P0C7V6 817 aa14.33□□□□□ -0.12
TRAF4-202ENST00000262396 CCL23P55773 120 aa14.33□□□□□ -0.12
TRAF4-202ENST00000262396 PSMC6P62333 389 aa14.33□□□□□ -0.12
TRAF4-202ENST00000262396 PWP2Q15269 919 aaKnown RBP14.33□□□□□ -0.12
TRAF4-202ENST00000262396 DUSP28Q4G0W2 176 aa14.33□□□□□ -0.12
TRAF4-202ENST00000262396 TAPT1Q6NXT6 567 aa14.33□□□□□ -0.12
TRAF4-202ENST00000262396 SLC30A10Q6XR72 485 aa14.33□□□□□ -0.12
TRAF4-202ENST00000262396 ZNF365Q70YC5 407 aa14.33□□□□□ -0.12
TRAF4-202ENST00000262396 DGKHQ86XP1 1220 aa14.33□□□□□ -0.12
TRAF4-202ENST00000262396 TBC1D10CQ8IV04 446 aa14.33□□□□□ -0.12
TRAF4-202ENST00000262396 SMC5Q8IY18 1101 aa14.33□□□□□ -0.12
TRAF4-202ENST00000262396 RPUSD2Q8IZ73 545 aaKnown RBP14.33□□□□□ -0.12
TRAF4-202ENST00000262396 PNMA1Q8ND90 353 aa14.33□□□□□ -0.12
TRAF4-202ENST00000262396 GAS2L1Q99501 681 aaPredicted RBP14.33□□□□□ -0.12
TRAF4-202ENST00000262396 KRT23Q9C075 422 aa14.33□□□□□ -0.12
TRAF4-202ENST00000262396 UBA5Q9GZZ9 404 aa14.33□□□□□ -0.12
TRAF4-202ENST00000262396 VAT1LQ9HCJ6 419 aa14.33□□□□□ -0.12
TRAF4-202ENST00000262396 NKRFO15226 690 aaKnown RBP eCLIP14.32□□□□□ -0.122e-7■■□□□ 11.4
TRAF4-202ENST00000262396 NOVP48745 357 aa14.32□□□□□ -0.12
TRAF4-202ENST00000262396 RPS6P62753 249 aaKnown RBP14.32□□□□□ -0.12
TRAF4-202ENST00000262396 NUCB1Q02818 461 aa14.32□□□□□ -0.12
TRAF4-202ENST00000262396 TRDNQ13061 729 aa14.32□□□□□ -0.12
TRAF4-202ENST00000262396 TMEM240Q5SV17 173 aa14.32□□□□□ -0.12
TRAF4-202ENST00000262396 PLEKHM2Q8IWE5 1019 aa14.32□□□□□ -0.12
TRAF4-202ENST00000262396 SCFD2Q8WU76 684 aa14.32□□□□□ -0.12
TRAF4-202ENST00000262396 TRPV6Q9H1D0 765 aa14.32□□□□□ -0.12
TRAF4-202ENST00000262396 TTYH1Q9H313 450 aaPredicted RBP14.32□□□□□ -0.12
TRAF4-202ENST00000262396 CNNM2Q9H8M5 875 aa14.32□□□□□ -0.12
TRAF4-202ENST00000262396 IL23AQ9NPF7 189 aa14.32□□□□□ -0.12
TRAF4-202ENST00000262396 ASTN1O14525 1302 aa14.32□□□□□ -0.12
TRAF4-202ENST00000262396 B4E1Z4 1266 aa14.31□□□□□ -0.12
TRAF4-202ENST00000262396 PARP1P09874 1014 aaKnown RBP14.31□□□□□ -0.12
TRAF4-202ENST00000262396 TXNP10599 105 aaKnown RBP14.31□□□□□ -0.12
TRAF4-202ENST00000262396 TTLL4Q14679 1199 aa14.31□□□□□ -0.12
TRAF4-202ENST00000262396 RAB30Q15771 203 aa14.31□□□□□ -0.12
TRAF4-202ENST00000262396 CDC37Q16543 378 aaPredicted RBP14.31□□□□□ -0.12
TRAF4-202ENST00000262396 OTOP2Q7RTS6 562 aa14.31□□□□□ -0.12
TRAF4-202ENST00000262396 MCF2L2Q86YR7 1114 aa14.31□□□□□ -0.12
TRAF4-202ENST00000262396 RETREG2Q8NC44 543 aa14.31□□□□□ -0.12
TRAF4-202ENST00000262396 DNERQ8NFT8 737 aa14.31□□□□□ -0.12
TRAF4-202ENST00000262396 EXOC6Q8TAG9 804 aa14.31□□□□□ -0.12
TRAF4-202ENST00000262396 PPM1EQ8WY54 764 aa14.31□□□□□ -0.12
TRAF4-202ENST00000262396 ZSCAN10Q96SZ4 725 aaPredicted RBP14.31□□□□□ -0.12
TRAF4-202ENST00000262396 MTG1Q9BT17 334 aaPredicted RBP14.31□□□□□ -0.12
TRAF4-202ENST00000262396 ZNF576Q9H609 170 aa14.31□□□□□ -0.12
TRAF4-202ENST00000262396 NEDD4P46934 1319 aa14.31□□□□□ -0.12
TRAF4-202ENST00000262396 WDR19Q8NEZ3 1342 aa14.31□□□□□ -0.12
TRAF4-202ENST00000262396 CTAGE5O15320 804 aa14.3□□□□□ -0.12
TRAF4-202ENST00000262396 KPNA6O60684 536 aa14.3□□□□□ -0.12
TRAF4-202ENST00000262396 CD4P01730 458 aa14.3□□□□□ -0.12
TRAF4-202ENST00000262396 IGHDP01880 384 aa14.3□□□□□ -0.12
TRAF4-202ENST00000262396 PTGS1P23219 599 aa14.3□□□□□ -0.12
TRAF4-202ENST00000262396 NKX3-2P78367 333 aa14.3□□□□□ -0.12
TRAF4-202ENST00000262396 ASPRV1Q53RT3 343 aa14.3□□□□□ -0.12
TRAF4-202ENST00000262396 IFIT1BQ5T764 474 aaKnown RBP14.3□□□□□ -0.12
TRAF4-202ENST00000262396 DSCC1Q9BVC3 393 aa14.3□□□□□ -0.12
TRAF4-202ENST00000262396 OSBPL3Q9H4L5 887 aa14.3□□□□□ -0.12
TRAF4-202ENST00000262396 SLC28A3Q9HAS3 691 aa14.3□□□□□ -0.12
TRAF4-202ENST00000262396 MRPL11Q9Y3B7 192 aaKnown RBP14.3□□□□□ -0.12
TRAF4-202ENST00000262396 ABCB11O95342 1321 aa14.3□□□□□ -0.12
TRAF4-202ENST00000262396 MCM3APO60318 1980 aa14.29□□□□□ -0.12
TRAF4-202ENST00000262396 ERICH2A1L162 156 aa14.29□□□□□ -0.12
TRAF4-202ENST00000262396 GRXCR1A8MXD5 290 aa14.29□□□□□ -0.12
TRAF4-202ENST00000262396 B4GALT4O60513 344 aa14.29□□□□□ -0.12
TRAF4-202ENST00000262396 ACTN1P12814 892 aa14.29□□□□□ -0.12
TRAF4-202ENST00000262396 GRIN2CQ14957 1233 aa14.29□□□□□ -0.12
TRAF4-202ENST00000262396 ARHGEF16Q5VV41 709 aa14.29□□□□□ -0.12
TRAF4-202ENST00000262396 SEPT14Q6ZU15 432 aa14.29□□□□□ -0.12
TRAF4-202ENST00000262396 CHST3Q7LGC8 479 aa14.29□□□□□ -0.12
TRAF4-202ENST00000262396 FBXO11Q86XK2 927 aa14.29□□□□□ -0.12
TRAF4-202ENST00000262396 MORC4Q8TE76 937 aa14.29□□□□□ -0.12
TRAF4-202ENST00000262396 RUFY2Q8WXA3 655 aa14.29□□□□□ -0.12
TRAF4-202ENST00000262396 CLEC4DQ8WXI8 215 aa14.29□□□□□ -0.12
TRAF4-202ENST00000262396 ALDH8A1Q9H2A2 487 aaPredicted RBP14.29□□□□□ -0.12
TRAF4-202ENST00000262396 CPVLQ9H3G5 476 aa14.29□□□□□ -0.12
TRAF4-202ENST00000262396 SLC4A7Q9Y6M7 1214 aa14.29□□□□□ -0.12
TRAF4-202ENST00000262396 TNKSO95271 1327 aa14.29□□□□□ -0.12
TRAF4-202ENST00000262396 SNHG28P0DPA3 235 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms