RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 HIBADHP31937 336 aaKnown RBP11.18□□□□□ -0.62
PALB2-201ENST00000261584 COPB2P35606 906 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 ERFP50548 548 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 ANKRD40Q6AI12 368 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 U2AF1L4Q8WU68 220 aaKnown RBP11.18□□□□□ -0.62
PALB2-201ENST00000261584 RNF26Q9BY78 433 aaPredicted RBP11.18□□□□□ -0.62
PALB2-201ENST00000261584 GPR108Q9NPR9 543 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 RIPOR2Q9Y4F9 1068 aa11.18□□□□□ -0.62
PALB2-201ENST00000261584 MAP3K15Q6ZN16 1313 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 PPP1R3GB7ZBB8 358 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 DDX39AO00148 427 aaKnown RBP11.17□□□□□ -0.62
PALB2-201ENST00000261584 SP4Q02446 784 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 ZYXQ15942 572 aaKnown RBP11.17□□□□□ -0.62
PALB2-201ENST00000261584 CALCRLQ16602 461 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 RSRC2Q7L4I2 434 aaKnown RBP11.17□□□□□ -0.62
PALB2-201ENST00000261584 OTUD6AQ7L8S5 288 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 TEX11Q8IYF3 940 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 SYCP3Q8IZU3 236 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 RAB34Q9BZG1 259 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 SLC24A3Q9HC58 644 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 MYO1AQ9UBC5 1043 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 PTPN22Q9Y2R2 807 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 CAPN6Q9Y6Q1 641 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 GCOM1H8Y6P7 765 aaPredicted RBP11.17□□□□□ -0.62
PALB2-201ENST00000261584 ATP8B1O43520 1251 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 LDHBP07195 334 aaKnown RBP11.17□□□□□ -0.62
PALB2-201ENST00000261584 MYZAPP0CAP1 466 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 TMOD1P28289 359 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 SLC1A4P43007 532 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 CARSP49589 748 aaKnown RBP11.17□□□□□ -0.62
PALB2-201ENST00000261584 UBXN2AP68543 259 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 TRIM14Q14142 442 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 NONOQ15233 471 aaKnown RBP eCLIP11.17□□□□□ -0.62
PALB2-201ENST00000261584 RPS6KA1Q15418 735 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 NTRK3Q16288 839 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 FAM133BQ5BKY9 247 aaKnown RBP11.17□□□□□ -0.62
PALB2-201ENST00000261584 TRIM58Q8NG06 486 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 P2RX5Q93086 422 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 ZNF622Q969S3 477 aaKnown RBP eCLIP11.17□□□□□ -0.624e-6■□□□□ 9.9
PALB2-201ENST00000261584 PPLO60437 1756 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 KIF4AO95239 1232 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 CLNS1AP54105 237 aaKnown RBP11.17□□□□□ -0.62
PALB2-201ENST00000261584 SFMBT2Q5VUG0 894 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 ADGRA1Q86SQ6 560 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 TBCKQ8TEA7 893 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 CCDC51Q96ER9 411 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 NLRP3Q96P20 1036 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 DDX47Q9H0S4 455 aaKnown RBP11.17□□□□□ -0.62
PALB2-201ENST00000261584 TMX4Q9H1E5 349 aaPredicted RBP11.17□□□□□ -0.62
PALB2-201ENST00000261584 RBM28Q9NW13 759 aaKnown RBP11.17□□□□□ -0.62
PALB2-201ENST00000261584 RWDD2AQ9UIY3 292 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 NOVA2Q9UNW9 492 aaKnown RBP11.17□□□□□ -0.62
PALB2-201ENST00000261584 LMTK2Q8IWU2 1503 aa11.17□□□□□ -0.62
PALB2-201ENST00000261584 PLEKHG1Q9ULL1 1385 aa11.16□□□□□ -0.62
PALB2-201ENST00000261584 KRIT1O00522 736 aa11.16□□□□□ -0.62
PALB2-201ENST00000261584 PALMO75781 387 aa11.16□□□□□ -0.62
PALB2-201ENST00000261584 DISC1Q9NRI5 854 aa11.16□□□□□ -0.62
PALB2-201ENST00000261584 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.16□□□□□ -0.62
PALB2-201ENST00000261584 XDHP47989 1333 aa11.16□□□□□ -0.62
PALB2-201ENST00000261584 SALL1Q9NSC2 1324 aa11.16□□□□□ -0.62
PALB2-201ENST00000261584 DLC1Q96QB1 1528 aa11.16□□□□□ -0.62
PALB2-201ENST00000261584 PPP1R12BO60237 982 aaPredicted RBP11.16□□□□□ -0.62
PALB2-201ENST00000261584 LRRN2O75325 713 aa11.16□□□□□ -0.62
PALB2-201ENST00000261584 SF3B2Q13435 895 aaKnown RBP11.16□□□□□ -0.62
PALB2-201ENST00000261584 PEX26Q7Z412 305 aa11.16□□□□□ -0.62
PALB2-201ENST00000261584 CCDC91Q7Z6B0 441 aa11.16□□□□□ -0.62
PALB2-201ENST00000261584 VPS36Q86VN1 386 aa11.16□□□□□ -0.62
PALB2-201ENST00000261584 PIGSQ96S52 555 aa11.16□□□□□ -0.62
PALB2-201ENST00000261584 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.16□□□□□ -0.62
PALB2-201ENST00000261584 RBM12Q9NTZ6 932 aaKnown RBP11.16□□□□□ -0.62
PALB2-201ENST00000261584 HPCAL4Q9UM19 191 aa11.16□□□□□ -0.62
PALB2-201ENST00000261584 NEO1Q92859 1461 aa11.16□□□□□ -0.62
PALB2-201ENST00000261584 PDE2AO00408 941 aaPredicted RBP11.16□□□□□ -0.62
PALB2-201ENST00000261584 IRAK1P51617 712 aa11.16□□□□□ -0.62
PALB2-201ENST00000261584 SPATA4Q8NEY3 305 aa11.16□□□□□ -0.62
PALB2-201ENST00000261584 CD248Q9HCU0 757 aa11.16□□□□□ -0.62
PALB2-201ENST00000261584 KLRK1P26718 216 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 TNNC1P63316 161 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 PAK2Q13177 524 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 ZNF211Q13398 564 aaPredicted RBP11.15□□□□□ -0.62
PALB2-201ENST00000261584 ASIC2Q16515 512 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 CNNM4Q6P4Q7 775 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 CADPS2Q86UW7 1296 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 REXO1Q8N1G1 1221 aaKnown RBP11.15□□□□□ -0.62
PALB2-201ENST00000261584 RIMBP3CA6NJZ7 1639 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 RIMBP3BA6NNM3 1639 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 RIMBP3Q9UFD9 1639 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 RCCD1A6NED2 376 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 FAM196BA6NMK8 535 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 NEBLO76041 1014 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 OR52Z1P0C646 297 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 TMEM139Q8IV31 216 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 NDST4Q9H3R1 872 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 LGALS16A8MUM7 142 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 BAG3O95817 575 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 PABPC4Q13310 644 aaKnown RBP eCLIP11.15□□□□□ -0.62
PALB2-201ENST00000261584 CCDC38Q502W7 563 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 MED15Q96RN5 788 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 SETDB2Q96T68 719 aa11.15□□□□□ -0.62
PALB2-201ENST00000261584 FAM184BQ9ULE4 1060 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms