RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 PACSIN2Q9UNF0 486 aaPredicted RBP17.69■□□□□ 0.42
LMNB1-201ENST00000261366 UBR2Q8IWV8 1755 aa17.68■□□□□ 0.42
LMNB1-201ENST00000261366 OPA1O60313 960 aa17.68■□□□□ 0.42
LMNB1-201ENST00000261366 HPDP32754 393 aaPredicted RBP17.68■□□□□ 0.42
LMNB1-201ENST00000261366 GFPT1Q06210 699 aaPredicted RBP17.68■□□□□ 0.42
LMNB1-201ENST00000261366 HAUS3Q68CZ6 603 aa17.68■□□□□ 0.42
LMNB1-201ENST00000261366 BLIDQ8IZY5 108 aa17.68■□□□□ 0.42
LMNB1-201ENST00000261366 OTUD6BQ8N6M0 293 aa17.68■□□□□ 0.42
LMNB1-201ENST00000261366 TRIM58Q8NG06 486 aa17.68■□□□□ 0.42
LMNB1-201ENST00000261366 ABCA3Q99758 1704 aa17.68■□□□□ 0.42
LMNB1-201ENST00000261366 BCL9LQ86UU0 1499 aa17.68■□□□□ 0.42
LMNB1-201ENST00000261366 SHANK3Q9BYB0 1731 aa17.68■□□□□ 0.42
LMNB1-201ENST00000261366 ANO9A1A5B4 782 aa17.68■□□□□ 0.42
LMNB1-201ENST00000261366 KIAA0754O94854 1291 aa17.68■□□□□ 0.42
LMNB1-201ENST00000261366 CPP00450 1065 aa17.68■□□□□ 0.42
LMNB1-201ENST00000261366 LONP1P36776 959 aaKnown RBP17.68■□□□□ 0.42
LMNB1-201ENST00000261366 GUCY2DQ02846 1103 aa17.68■□□□□ 0.42
LMNB1-201ENST00000261366 SUSD4Q5VX71 490 aa17.68■□□□□ 0.42
LMNB1-201ENST00000261366 STAG2Q8N3U4 1231 aa17.68■□□□□ 0.42
LMNB1-201ENST00000261366 ACSBG1Q96GR2 724 aa17.68■□□□□ 0.42
LMNB1-201ENST00000261366 NCAPGQ9BPX3 1015 aa17.68■□□□□ 0.42
LMNB1-201ENST00000261366 TSPY2A6NKD2 308 aa17.67■□□□□ 0.42
LMNB1-201ENST00000261366 GOLGA8KD6RF30 607 aa17.67■□□□□ 0.42
LMNB1-201ENST00000261366 GLI1P08151 1106 aa17.67■□□□□ 0.42
LMNB1-201ENST00000261366 PLCG1P19174 1290 aa17.67■□□□□ 0.42
LMNB1-201ENST00000261366 TDRD12Q587J7 1177 aaKnown RBP17.67■□□□□ 0.42
LMNB1-201ENST00000261366 HEATR3Q7Z4Q2 680 aa17.67■□□□□ 0.42
LMNB1-201ENST00000261366 P2RX5Q93086 422 aa17.67■□□□□ 0.42
LMNB1-201ENST00000261366 RNPC3Q96LT9 517 aaKnown RBP17.67■□□□□ 0.42
LMNB1-201ENST00000261366 MYCBPQ99417 103 aaPredicted RBP17.67■□□□□ 0.42
LMNB1-201ENST00000261366 SH2D4AQ9H788 454 aa17.67■□□□□ 0.42
LMNB1-201ENST00000261366 EPB41L5Q9HCM4 733 aa17.67■□□□□ 0.42
LMNB1-201ENST00000261366 FAM170AA1A519 330 aa17.67■□□□□ 0.42
LMNB1-201ENST00000261366 PAFAH1B1P43034 410 aa17.67■□□□□ 0.42
LMNB1-201ENST00000261366 ARID5AQ03989 594 aa17.67■□□□□ 0.42
LMNB1-201ENST00000261366 CHRNDQ07001 517 aa17.67■□□□□ 0.42
LMNB1-201ENST00000261366 CCDC170Q8IYT3 715 aa17.67■□□□□ 0.42
LMNB1-201ENST00000261366 C4orf32Q8N8J7 132 aa17.67■□□□□ 0.42
LMNB1-201ENST00000261366 TANGO6Q9C0B7 1094 aa17.67■□□□□ 0.42
LMNB1-201ENST00000261366 NLRC4Q9NPP4 1024 aa17.67■□□□□ 0.42
LMNB1-201ENST00000261366 TOGARAM1Q9Y4F4 1720 aa17.67■□□□□ 0.42
LMNB1-201ENST00000261366 BACH1O14867 736 aa17.66■□□□□ 0.42
LMNB1-201ENST00000261366 MAGEA1P43355 309 aa17.66■□□□□ 0.42
LMNB1-201ENST00000261366 EPHB4P54760 987 aa17.66■□□□□ 0.42
LMNB1-201ENST00000261366 SF3A3Q12874 501 aaKnown RBP eCLIP17.66■□□□□ 0.42
LMNB1-201ENST00000261366 MIIPQ5JXC2 388 aa17.66■□□□□ 0.42
LMNB1-201ENST00000261366 GIMAP8Q8ND71 665 aaPredicted RBP17.66■□□□□ 0.42
LMNB1-201ENST00000261366 JPH2Q9BR39 696 aaPredicted RBP17.66■□□□□ 0.42
LMNB1-201ENST00000261366 FTCDO95954 541 aa17.66■□□□□ 0.42
LMNB1-201ENST00000261366 FNBP4Q8N3X1 1017 aaPredicted RBP17.66■□□□□ 0.42
LMNB1-201ENST00000261366 MMGT1Q8N4V1 131 aa17.66■□□□□ 0.42
LMNB1-201ENST00000261366 LRRC53A6NM62 1247 aa17.65■□□□□ 0.42
LMNB1-201ENST00000261366 IGHMBP2P38935 993 aaKnown RBP17.65■□□□□ 0.42
LMNB1-201ENST00000261366 RCAN1P53805 252 aa17.65■□□□□ 0.42
LMNB1-201ENST00000261366 CFAP58Q5T655 872 aa17.65■□□□□ 0.42
LMNB1-201ENST00000261366 DYMQ7RTS9 669 aa17.65■□□□□ 0.42
LMNB1-201ENST00000261366 DHX37Q8IY37 1157 aaKnown RBP17.65■□□□□ 0.42
LMNB1-201ENST00000261366 MTMR8Q96EF0 704 aa17.65■□□□□ 0.42
LMNB1-201ENST00000261366 ALS2CR12Q96Q35 445 aa17.65■□□□□ 0.42
LMNB1-201ENST00000261366 KANSL2Q9H9L4 492 aa17.65■□□□□ 0.42
LMNB1-201ENST00000261366 HYOU1Q9Y4L1 999 aa17.65■□□□□ 0.42
LMNB1-201ENST00000261366 BCL9O00512 1426 aa17.65■□□□□ 0.42
LMNB1-201ENST00000261366 PPP2R5BQ15173 497 aa17.65■□□□□ 0.42
LMNB1-201ENST00000261366 PFKFB3Q16875 520 aaPredicted RBP17.65■□□□□ 0.42
LMNB1-201ENST00000261366 MAATS1Q7Z4T9 603 aa17.65■□□□□ 0.42
LMNB1-201ENST00000261366 SH3GL2Q99962 352 aa17.65■□□□□ 0.42
LMNB1-201ENST00000261366 RIOK1Q9BRS2 568 aaKnown RBP17.65■□□□□ 0.42
LMNB1-201ENST00000261366 HEXIM1O94992 359 aaKnown RBP17.65■□□□□ 0.42
LMNB1-201ENST00000261366 GOLGA8HP0CJ92 632 aa17.65■□□□□ 0.42
LMNB1-201ENST00000261366 SLC1A4P43007 532 aa17.65■□□□□ 0.42
LMNB1-201ENST00000261366 TXNRD1Q16881 649 aa17.65■□□□□ 0.42
LMNB1-201ENST00000261366 LETM2Q2VYF4 491 aa17.65■□□□□ 0.42
LMNB1-201ENST00000261366 SUGP1Q8IWZ8 645 aaKnown RBP17.65■□□□□ 0.42
LMNB1-201ENST00000261366 PURBQ96QR8 312 aaKnown RBP17.65■□□□□ 0.42
LMNB1-201ENST00000261366 PYM1Q9BRP8 204 aaKnown RBP17.65■□□□□ 0.42
LMNB1-201ENST00000261366 NUP58Q9BVL2 599 aa17.65■□□□□ 0.42
LMNB1-201ENST00000261366 YY1AP1Q9H869 796 aa17.65■□□□□ 0.42
LMNB1-201ENST00000261366 GEMIN8Q9NWZ8 242 aaKnown RBP17.65■□□□□ 0.42
LMNB1-201ENST00000261366 ATP2C2O75185 946 aa17.64■□□□□ 0.41
LMNB1-201ENST00000261366 RHOBTB3O94955 611 aa17.64■□□□□ 0.41
LMNB1-201ENST00000261366 CALM1P0DP23 149 aa17.64■□□□□ 0.41
LMNB1-201ENST00000261366 CALM2P0DP24 149 aa17.64■□□□□ 0.41
LMNB1-201ENST00000261366 CALM3P0DP25 149 aa17.64■□□□□ 0.41
LMNB1-201ENST00000261366 UIMC1Q96RL1 719 aa17.64■□□□□ 0.41
LMNB1-201ENST00000261366 CD248Q9HCU0 757 aa17.64■□□□□ 0.41
LMNB1-201ENST00000261366 BAZ2AQ9UIF9 1905 aaKnown RBP17.64■□□□□ 0.41
LMNB1-201ENST00000261366 NHSL1Q5SYE7 1610 aa17.64■□□□□ 0.41
LMNB1-201ENST00000261366 SSBP05455 408 aaKnown RBP eCLIP17.64■□□□□ 0.41
LMNB1-201ENST00000261366 CCNE1P24864 410 aa17.64■□□□□ 0.41
LMNB1-201ENST00000261366 TECP42680 631 aa17.64■□□□□ 0.41
LMNB1-201ENST00000261366 CABP7Q86V35 215 aa17.64■□□□□ 0.41
LMNB1-201ENST00000261366 KLHL7Q8IXQ5 586 aa17.64■□□□□ 0.41
LMNB1-201ENST00000261366 KRT12Q99456 494 aa17.64■□□□□ 0.41
LMNB1-201ENST00000261366 TSGA10Q9BZW7 698 aa17.64■□□□□ 0.41
LMNB1-201ENST00000261366 PPANQ9NQ55 473 aaKnown RBP17.64■□□□□ 0.41
LMNB1-201ENST00000261366 ZNF233A6NK53 670 aa17.63■□□□□ 0.41
LMNB1-201ENST00000261366 TRAPPC10P48553 1259 aa17.63■□□□□ 0.41
LMNB1-201ENST00000261366 IFT88Q13099 833 aa17.63■□□□□ 0.41
LMNB1-201ENST00000261366 LRRC41Q15345 812 aa17.63■□□□□ 0.41
LMNB1-201ENST00000261366 GBP6Q6ZN66 633 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms