RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 DIS3Q9Y2L1 958 aaKnown RBP16.23■□□□□ 0.19
VPS25-201ENST00000253794 PLXNB2O15031 1838 aa16.23■□□□□ 0.19
VPS25-201ENST00000253794 ZSWIM8A7E2V4 1837 aa16.22■□□□□ 0.19
VPS25-201ENST00000253794 LOC102724159A0A0B4J2E5 919 aa16.22■□□□□ 0.19
VPS25-201ENST00000253794 GCOM1H8Y6P7 765 aaPredicted RBP16.22■□□□□ 0.19
VPS25-201ENST00000253794 IGHA2P01877 340 aa16.22■□□□□ 0.19
VPS25-201ENST00000253794 POLR2MP0CAP2 368 aa16.22■□□□□ 0.19
VPS25-201ENST00000253794 XRCC5P13010 732 aaKnown RBP16.22■□□□□ 0.19
VPS25-201ENST00000253794 HOXD10P28358 340 aa16.22■□□□□ 0.19
VPS25-201ENST00000253794 GJB2P29033 226 aa16.22■□□□□ 0.19
VPS25-201ENST00000253794 GNA11P29992 359 aa16.22■□□□□ 0.19
VPS25-201ENST00000253794 CLK2P49760 499 aaKnown RBP16.22■□□□□ 0.19
VPS25-201ENST00000253794 MRPL12P52815 198 aaKnown RBP16.22■□□□□ 0.19
VPS25-201ENST00000253794 RPS6P62753 249 aaKnown RBP16.22■□□□□ 0.19
VPS25-201ENST00000253794 MAP2K5Q13163 448 aa16.22■□□□□ 0.19
VPS25-201ENST00000253794 IRF5Q13568 498 aa16.22■□□□□ 0.19
VPS25-201ENST00000253794 PWP2Q15269 919 aaKnown RBP16.22■□□□□ 0.19
VPS25-201ENST00000253794 NPY5RQ15761 445 aa16.22■□□□□ 0.19
VPS25-201ENST00000253794 ZNF792Q3KQV3 632 aa16.22■□□□□ 0.19
VPS25-201ENST00000253794 SYTL5Q8TDW5 730 aaPredicted RBP16.22■□□□□ 0.19
VPS25-201ENST00000253794 CUL5Q93034 780 aa16.22■□□□□ 0.19
VPS25-201ENST00000253794 NUDT12Q9BQG2 462 aa16.22■□□□□ 0.19
VPS25-201ENST00000253794 C6orf50Q9HD87 102 aa16.22■□□□□ 0.19
VPS25-201ENST00000253794 SRRDQ9UH36 339 aa16.22■□□□□ 0.19
VPS25-201ENST00000253794 FRMPD4Q14CM0 1322 aa16.21■□□□□ 0.19
VPS25-201ENST00000253794 SMCO2A6NFE2 343 aa16.21■□□□□ 0.19
VPS25-201ENST00000253794 COBLO75128 1261 aa16.21■□□□□ 0.19
VPS25-201ENST00000253794 CALML3P27482 149 aa16.21■□□□□ 0.19
VPS25-201ENST00000253794 RGS2P41220 211 aa16.21■□□□□ 0.19
VPS25-201ENST00000253794 SLC4A3P48751 1232 aa16.21■□□□□ 0.19
VPS25-201ENST00000253794 ADCY7P51828 1080 aa16.21■□□□□ 0.19
VPS25-201ENST00000253794 LBX1P52954 281 aa16.21■□□□□ 0.19
VPS25-201ENST00000253794 BAATQ14032 418 aaPredicted RBP16.21■□□□□ 0.19
VPS25-201ENST00000253794 WDR78Q5VTH9 848 aa16.21■□□□□ 0.19
VPS25-201ENST00000253794 MCTP2Q6DN12 878 aa16.21■□□□□ 0.19
VPS25-201ENST00000253794 NSMFQ6X4W1 530 aa16.21■□□□□ 0.19
VPS25-201ENST00000253794 SLC30A10Q6XR72 485 aa16.21■□□□□ 0.19
VPS25-201ENST00000253794 ZNF467Q7Z7K2 595 aaPredicted RBP16.21■□□□□ 0.19
VPS25-201ENST00000253794 FAM184AQ8NB25 1140 aa16.21■□□□□ 0.19
VPS25-201ENST00000253794 DNERQ8NFT8 737 aa16.21■□□□□ 0.19
VPS25-201ENST00000253794 FBXO18Q8NFZ0 1043 aa16.21■□□□□ 0.19
VPS25-201ENST00000253794 BICD2Q8TD16 824 aa16.21■□□□□ 0.19
VPS25-201ENST00000253794 TBC1D5Q92609 795 aa16.21■□□□□ 0.19
VPS25-201ENST00000253794 FGD4Q96M96 766 aa16.21■□□□□ 0.19
VPS25-201ENST00000253794 CWC22Q9HCG8 908 aaKnown RBP16.21■□□□□ 0.19
VPS25-201ENST00000253794 PRDM10Q9NQV6 1147 aa16.21■□□□□ 0.19
VPS25-201ENST00000253794 SLC5A4Q9NY91 659 aa16.21■□□□□ 0.19
VPS25-201ENST00000253794 CASP8AP2Q9UKL3 1982 aa16.2■□□□□ 0.18
VPS25-201ENST00000253794 POTEB2H3BUK9 544 aa16.2■□□□□ 0.18
VPS25-201ENST00000253794 M0R2N6 131 aa16.2■□□□□ 0.18
VPS25-201ENST00000253794 DTNBO60941 627 aa16.2■□□□□ 0.18
VPS25-201ENST00000253794 CFBP00751 764 aa16.2■□□□□ 0.18
VPS25-201ENST00000253794 PRKCZQ05513 592 aa16.2■□□□□ 0.18
VPS25-201ENST00000253794 OTOP1Q7RTM1 612 aa16.2■□□□□ 0.18
VPS25-201ENST00000253794 MSL3Q8N5Y2 521 aaKnown RBP16.2■□□□□ 0.18
VPS25-201ENST00000253794 APBA2Q99767 749 aa16.2■□□□□ 0.18
VPS25-201ENST00000253794 COL20A1Q9P218 1284 aa16.2■□□□□ 0.18
VPS25-201ENST00000253794 PCDHA4Q9UN74 947 aa16.2■□□□□ 0.18
VPS25-201ENST00000253794 LCTP09848 1927 aa16.19■□□□□ 0.18
VPS25-201ENST00000253794 FOSP01100 380 aaPredicted RBP16.19■□□□□ 0.18
VPS25-201ENST00000253794 MMP1P03956 469 aa16.19■□□□□ 0.18
VPS25-201ENST00000253794 ANP32AP39687 249 aaKnown RBP16.19■□□□□ 0.18
VPS25-201ENST00000253794 FLT3LGP49771 235 aa16.19■□□□□ 0.18
VPS25-201ENST00000253794 AP3B2Q13367 1082 aa16.19■□□□□ 0.18
VPS25-201ENST00000253794 OLFML2BQ68BL8 750 aa16.19■□□□□ 0.18
VPS25-201ENST00000253794 KRT40Q6A162 431 aa16.19■□□□□ 0.18
VPS25-201ENST00000253794 USP17L6PQ6QN14 398 aa16.19■□□□□ 0.18
VPS25-201ENST00000253794 MAMDC4Q6UXC1 1216 aa16.19■□□□□ 0.18
VPS25-201ENST00000253794 TRMT44Q8IYL2 757 aaKnown RBP16.19■□□□□ 0.18
VPS25-201ENST00000253794 MORC4Q8TE76 937 aa16.19■□□□□ 0.18
VPS25-201ENST00000253794 C8orf76Q96K31 380 aa16.19■□□□□ 0.18
VPS25-201ENST00000253794 ADD3Q9UEY8 706 aaKnown RBP16.19■□□□□ 0.18
VPS25-201ENST00000253794 GABRQQ9UN88 632 aa16.19■□□□□ 0.18
VPS25-201ENST00000253794 HTTP42858 3142 aa16.19■□□□□ 0.18
VPS25-201ENST00000253794 ASTN1O14525 1302 aa16.19■□□□□ 0.18
VPS25-201ENST00000253794 RPTORQ8N122 1335 aa16.19■□□□□ 0.18
VPS25-201ENST00000253794 DOCK3Q8IZD9 2030 aa16.18■□□□□ 0.18
VPS25-201ENST00000253794 SOWAHBA6NEL2 793 aa16.18■□□□□ 0.18
VPS25-201ENST00000253794 PGK2P07205 417 aa16.18■□□□□ 0.18
VPS25-201ENST00000253794 PDCP20941 246 aa16.18■□□□□ 0.18
VPS25-201ENST00000253794 EDNRBP24530 442 aa16.18■□□□□ 0.18
VPS25-201ENST00000253794 NLRP5P59047 1200 aa16.18■□□□□ 0.18
VPS25-201ENST00000253794 CNTN2Q02246 1040 aa16.18■□□□□ 0.18
VPS25-201ENST00000253794 TRIM29Q14134 588 aa16.18■□□□□ 0.18
VPS25-201ENST00000253794 CTU1Q7Z7A3 348 aaKnown RBP16.18■□□□□ 0.18
VPS25-201ENST00000253794 BLIDQ8IZY5 108 aa16.18■□□□□ 0.18
VPS25-201ENST00000253794 REXO1Q8N1G1 1221 aaKnown RBP16.18■□□□□ 0.18
VPS25-201ENST00000253794 PXYLP1Q8TE99 480 aa16.18■□□□□ 0.18
VPS25-201ENST00000253794 MAML3Q96JK9 1138 aa16.18■□□□□ 0.18
VPS25-201ENST00000253794 GJB4Q9NTQ9 266 aa16.18■□□□□ 0.18
VPS25-201ENST00000253794 KCNJ14Q9UNX9 436 aa16.18■□□□□ 0.18
VPS25-201ENST00000253794 RBM19Q9Y4C8 960 aaKnown RBP16.18■□□□□ 0.18
VPS25-201ENST00000253794 PDIA4P13667 645 aaKnown RBP16.17■□□□□ 0.18
VPS25-201ENST00000253794 HOXA13P31271 388 aaPredicted RBP16.17■□□□□ 0.18
VPS25-201ENST00000253794 UBE2SQ16763 222 aa16.17■□□□□ 0.18
VPS25-201ENST00000253794 DPP9Q86TI2 863 aa16.17■□□□□ 0.18
VPS25-201ENST00000253794 NPLOC4Q8TAT6 608 aa16.17■□□□□ 0.18
VPS25-201ENST00000253794 NSUN6Q8TEA1 469 aaKnown RBP16.17■□□□□ 0.18
VPS25-201ENST00000253794 TNFRSF25Q93038 417 aa16.17■□□□□ 0.18
VPS25-201ENST00000253794 IWS1Q96ST2 819 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms