RNA–Protein interactions for RNA: ENST00000222399.10

LAMB1-201, Transcript of laminin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMB1, Length 5,725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-201ENST00000222399 LRRIQ4A6NIV6 560 aa14.9□□□□□ -0.02
LAMB1-201ENST00000222399 GOLGA8KD6RF30 607 aa14.9□□□□□ -0.02
LAMB1-201ENST00000222399 ODR4Q5SWX8 454 aa14.9□□□□□ -0.02
LAMB1-201ENST00000222399 BBOF1Q8ND07 529 aa14.9□□□□□ -0.02
LAMB1-201ENST00000222399 ATP6V0A1Q93050 837 aa14.9□□□□□ -0.02
LAMB1-201ENST00000222399 CSRNP1Q96S65 589 aa14.9□□□□□ -0.02
LAMB1-201ENST00000222399 ZMYND15Q9H091 742 aa14.9□□□□□ -0.02
LAMB1-201ENST00000222399 HEG1Q9ULI3 1381 aa14.9□□□□□ -0.02
LAMB1-201ENST00000222399 EFCAB8A8MWE9 144 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 SORBS3O60504 671 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 PIK3CAP42336 1068 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 MFAP3P55082 362 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 FAM196AQ6ZSG2 479 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 TSC1Q92574 1164 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 STX2P32856 288 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 ARHGAP27Q6ZUM4 889 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 ZNF589Q86UQ0 364 aaPredicted RBP14.89□□□□□ -0.03
LAMB1-201ENST00000222399 UNC5CLQ8IV45 518 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 LMNTD2Q8IXW0 634 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 RUNDC3BQ96NL0 473 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 KANSL2Q9H9L4 492 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 ZNF277Q9NRM2 450 aaPredicted RBP14.89□□□□□ -0.03
LAMB1-201ENST00000222399 GUCY2FP51841 1108 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 CTAGE3PQ8IX95 158 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 POMGNT1Q8WZA1 660 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.89□□□□□ -0.03
LAMB1-201ENST00000222399 IFNB1P01574 187 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 EEF1GP26641 437 aaKnown RBP14.89□□□□□ -0.03
LAMB1-201ENST00000222399 DYNLL1P63167 89 aaKnown RBP14.89□□□□□ -0.03
LAMB1-201ENST00000222399 CYP4A11Q02928 519 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 PKP1Q13835 747 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 ANKRD20A3Q5VUR7 823 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 NLRP10Q86W26 655 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.89□□□□□ -0.03
LAMB1-201ENST00000222399 ZNF577Q9BSK1 485 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 AFG3L2Q9Y4W6 797 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 EPN1Q9Y6I3 576 aaPredicted RBP14.89□□□□□ -0.03
LAMB1-201ENST00000222399 MYL1P05976 194 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 TROVE2P10155 538 aaKnown RBP eCLIP14.89□□□□□ -0.03
LAMB1-201ENST00000222399 LMNB1P20700 586 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 NSFP46459 744 aaKnown RBP14.89□□□□□ -0.03
LAMB1-201ENST00000222399 ROBO2Q9HCK4 1378 aa14.89□□□□□ -0.03
LAMB1-201ENST00000222399 ZNF853P0CG23 659 aa14.88□□□□□ -0.03
LAMB1-201ENST00000222399 ETF1P62495 437 aaKnown RBP14.88□□□□□ -0.03
LAMB1-201ENST00000222399 BSPRYQ5W0U4 402 aa14.88□□□□□ -0.03
LAMB1-201ENST00000222399 CCDC127Q96BQ5 260 aa14.88□□□□□ -0.03
LAMB1-201ENST00000222399 JPH2Q9BR39 696 aaPredicted RBP14.88□□□□□ -0.03
LAMB1-201ENST00000222399 WDR11Q9BZH6 1224 aa14.88□□□□□ -0.03
LAMB1-201ENST00000222399 QTRT2Q9H974 415 aaKnown RBP14.88□□□□□ -0.03
LAMB1-201ENST00000222399 SEC31BQ9NQW1 1179 aa14.88□□□□□ -0.03
LAMB1-201ENST00000222399 MAN1A1P33908 653 aa14.88□□□□□ -0.03
LAMB1-201ENST00000222399 KCTD2Q14681 263 aa14.88□□□□□ -0.03
LAMB1-201ENST00000222399 TUBGCP2Q9BSJ2 902 aa14.88□□□□□ -0.03
LAMB1-201ENST00000222399 RPUSD2Q8IZ73 545 aaKnown RBP14.88□□□□□ -0.03
LAMB1-201ENST00000222399 DHX36Q9H2U1 1008 aaKnown RBP14.88□□□□□ -0.03
LAMB1-201ENST00000222399 HOMER3Q9NSC5 361 aa14.88□□□□□ -0.03
LAMB1-201ENST00000222399 SH2B2O14492 632 aaPredicted RBP14.88□□□□□ -0.03
LAMB1-201ENST00000222399 HOXA7P31268 230 aaPredicted RBP14.88□□□□□ -0.03
LAMB1-201ENST00000222399 PTK2Q05397 1052 aa14.88□□□□□ -0.03
LAMB1-201ENST00000222399 CC2D2BQ6DHV5 1058 aa14.88□□□□□ -0.03
LAMB1-201ENST00000222399 TDRD7Q8NHU6 1098 aaKnown RBP14.88□□□□□ -0.03
LAMB1-201ENST00000222399 GJA10Q969M2 543 aa14.88□□□□□ -0.03
LAMB1-201ENST00000222399 VCXQ9H320 206 aa14.88□□□□□ -0.03
LAMB1-201ENST00000222399 ANKFY1Q9P2R3 1169 aa14.88□□□□□ -0.03
LAMB1-201ENST00000222399 ERBB3P21860 1342 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 ZNF500O60304 480 aaPredicted RBP14.87□□□□□ -0.03
LAMB1-201ENST00000222399 ABCD1P33897 745 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 PCK1P35558 622 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 PSMC2P35998 433 aaKnown RBP14.87□□□□□ -0.03
LAMB1-201ENST00000222399 CCNA1P78396 465 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 RNF169Q8NCN4 708 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 ANO3Q9BYT9 981 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 PCDHA5Q9Y5H7 936 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 IKBKBO14920 756 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 MMP1P03956 469 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 GPR162Q16538 588 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 NT5C1BQ96P26 610 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 STK17AQ9UEE5 414 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 SEPT9Q9UHD8 586 aaPredicted RBP14.87□□□□□ -0.03
LAMB1-201ENST00000222399 RASSF2P50749 326 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 TSNAXIP1Q2TAA8 658 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 LCORLQ8N3X6 602 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 ANKRD42Q8N9B4 389 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 FAM193BQ96PV7 902 aaPredicted RBP14.87□□□□□ -0.03
LAMB1-201ENST00000222399 NT5C2P49902 561 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 PPP2R5CQ13362 524 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 CCDC13Q8IYE1 715 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 P2RX5Q93086 422 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 EPSTI1Q96J88 318 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 FAM81BQ96LP2 452 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 XPOTO43592 962 aaKnown RBP14.87□□□□□ -0.03
LAMB1-201ENST00000222399 RNF8O76064 485 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 KIF23Q02241 960 aaPredicted RBP14.87□□□□□ -0.03
LAMB1-201ENST00000222399 EXOC8Q8IYI6 725 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 RETREG2Q8NC44 543 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 PPP4R1Q8TF05 950 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 TRIM11Q96F44 468 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 ACCSQ96QU6 501 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 PLEKHA4Q9H4M7 779 aa14.87□□□□□ -0.03
LAMB1-201ENST00000222399 ANTXR1Q9H6X2 564 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms