RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 RASSF4Q9H2L5 321 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 PSTPIP2Q9H939 334 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 PCDHA1Q9Y5I3 950 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 TNS1Q9HBL0 1735 aaKnown RBP10□□□□□ -0.81
MTHFD1-201ENST00000216605 KIF2AO00139 706 aaPredicted RBP10□□□□□ -0.81
MTHFD1-201ENST00000216605 ACTN4O43707 911 aaKnown RBP10□□□□□ -0.81
MTHFD1-201ENST00000216605 ECM2O94769 699 aaPredicted RBP10□□□□□ -0.81
MTHFD1-201ENST00000216605 LONP1P36776 959 aaKnown RBP10□□□□□ -0.81
MTHFD1-201ENST00000216605 NAA30Q147X3 362 aaPredicted RBP10□□□□□ -0.81
MTHFD1-201ENST00000216605 ZNF662Q6ZS27 426 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 TMC6Q7Z403 805 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 CUL5Q93034 780 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 TMEM39BQ9GZU3 492 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 NRXN2Q9P2S2 1712 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 FAM237AA0A1B0GTK4 181 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 ZBTB5O15062 677 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 OR52Z1P0C646 297 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 SMARCA1P28370 1054 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 UBASH3AP57075 661 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 CXCL9Q07325 125 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 ARL6IP4Q66PJ3 421 aaKnown RBP10□□□□□ -0.81
MTHFD1-201ENST00000216605 ERO1AQ96HE7 468 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 MRFAP1L1Q96HT8 127 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 PYM1Q9BRP8 204 aaKnown RBP10□□□□□ -0.81
MTHFD1-201ENST00000216605 XPO4Q9C0E2 1151 aaKnown RBP10□□□□□ -0.81
MTHFD1-201ENST00000216605 ARHGEF10LQ9HCE6 1279 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 MED4Q9NPJ6 270 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 FANCLQ9NW38 375 aa10□□□□□ -0.81
MTHFD1-201ENST00000216605 IGKV6D-41A0A0C4DH26 115 aa9.99□□□□□ -0.81
MTHFD1-201ENST00000216605 VIL1P09327 827 aaKnown RBP9.99□□□□□ -0.81
MTHFD1-201ENST00000216605 SKILP12757 684 aa9.99□□□□□ -0.81
MTHFD1-201ENST00000216605 ATP1A3P13637 1013 aa9.99□□□□□ -0.81
MTHFD1-201ENST00000216605 KCNA3P22001 575 aa9.99□□□□□ -0.81
MTHFD1-201ENST00000216605 VASPP50552 380 aaPredicted RBP9.99□□□□□ -0.81
MTHFD1-201ENST00000216605 FANCCQ00597 558 aa9.99□□□□□ -0.81
MTHFD1-201ENST00000216605 CDC37Q16543 378 aaPredicted RBP9.99□□□□□ -0.81
MTHFD1-201ENST00000216605 TMEM266Q2M3C6 531 aa9.99□□□□□ -0.81
MTHFD1-201ENST00000216605 QRICH1Q2TAL8 776 aa9.99□□□□□ -0.81
MTHFD1-201ENST00000216605 SARM1Q6SZW1 724 aa9.99□□□□□ -0.81
MTHFD1-201ENST00000216605 SMYD4Q8IYR2 804 aaPredicted RBP9.99□□□□□ -0.81
MTHFD1-201ENST00000216605 MLKLQ8NB16 471 aa9.99□□□□□ -0.81
MTHFD1-201ENST00000216605 DAGLBQ8NCG7 672 aa9.99□□□□□ -0.81
MTHFD1-201ENST00000216605 NYAP2Q9P242 653 aa9.99□□□□□ -0.81
MTHFD1-201ENST00000216605 DDX60LQ5H9U9 1706 aaKnown RBP9.99□□□□□ -0.81
MTHFD1-201ENST00000216605 NRDCO43847 1150 aa9.99□□□□□ -0.81
MTHFD1-201ENST00000216605 CALCRLQ16602 461 aa9.99□□□□□ -0.81
MTHFD1-201ENST00000216605 MAPK8IP1Q9UQF2 711 aa9.99□□□□□ -0.81
MTHFD1-201ENST00000216605 NFE2L3Q9Y4A8 694 aa9.99□□□□□ -0.81
MTHFD1-201ENST00000216605 USP17L15C9J2P7 530 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 USP17L13C9JLJ4 530 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 USP17L11C9JVI0 530 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 USP17L18D6R9N7 530 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 USP17L22D6RA61 530 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 USP17L17D6RBQ6 530 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 USP17L19D6RCP7 530 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 USP17L20D6RJB6 530 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 hCG_1984214I3L0E3 225 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 COBLO75128 1261 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 NDUFB10O96000 172 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 BMP3P12645 472 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 TGFB2P61812 414 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 USP17L24Q0WX57 530 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 LRCH2Q5VUJ6 765 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 USP17L6PQ6QN14 398 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 CABP7Q86V35 215 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 ZNF713Q8N859 430 aaPredicted RBP9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 DCAF4Q8WV16 495 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 FAM151AQ8WW52 585 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 MTFR1LQ9H019 292 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 ZNF215Q9UL58 517 aaPredicted RBP9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 SCN9AQ15858 1988 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 ADAMTSL1Q8N6G6 1762 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 LTBP1Q14766 1721 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 PLIN4Q96Q06 1357 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 SLU7O95391 586 aaKnown RBP9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 FOXD4Q12950 439 aaPredicted RBP9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 TNIP1Q15025 636 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 IL17AQ16552 155 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 CCDC144BQ3MJ40 725 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 POTEDQ86YR6 584 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 ITFG2Q969R8 447 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 CALML4Q96GE6 196 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 WDR70Q9NW82 654 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 HERC5Q9UII4 1024 aaKnown RBP9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 PES1O00541 588 aaKnown RBP9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 CBFA2T2O43439 604 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 TDP2O95551 362 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 ECE1P42892 770 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 MDM2Q00987 491 aaPredicted RBP9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 PTPN21Q16825 1174 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 KMT5BQ4FZB7 885 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 CCDC47Q96A33 483 aaKnown RBP9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 BPIFA3Q9BQP9 254 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 RAB34Q9BZG1 259 aa9.98□□□□□ -0.81
MTHFD1-201ENST00000216605 C10orf71Q711Q0 1435 aa9.97□□□□□ -0.81
MTHFD1-201ENST00000216605 IKBKBO14920 756 aa9.97□□□□□ -0.81
MTHFD1-201ENST00000216605 SSBP05455 408 aaKnown RBP eCLIP9.97□□□□□ -0.81
MTHFD1-201ENST00000216605 SNHG28P0DPA3 235 aa9.97□□□□□ -0.81
MTHFD1-201ENST00000216605 CUL4BQ13620 913 aa9.97□□□□□ -0.81
MTHFD1-201ENST00000216605 BMS1Q14692 1282 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms