RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Gucy1b3O54865 620 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Pip4k2aO70172 405 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 LrmpQ60664 539 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 PnocQ64387 187 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 F13a1Q8BH61 732 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Slc9b1Q8C0X2 565 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Eif3cQ8R1B4 911 aaKnown RBP12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Ubxn1Q922Y1 297 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Apol6B7ZC55 329 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Trim55G3X8Y1 545 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Terf1P70371 421 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Hdhd2Q3UGR5 259 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Kdm7aQ3UWM4 940 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Stap2Q8R0L1 411 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 GzmnQ920S1 248 aa12.85□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Gm7356A0A087WSA6 508 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Tex13cD3YU32 604 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 C2cd2E9Q3C1 696 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 A430078G23RikE9Q7Y4 484 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Folh1O35409 752 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Nap1l1P28656 391 aaKnown RBP12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Nf2P46662 596 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Ccdc51Q3URS9 406 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Cep131Q62036 1060 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Ncapg2Q6DFV1 1138 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Vipas39Q8BGQ1 491 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Fam173bQ9D1Z3 247 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Fsip1Q9D3V5 435 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Galntl5Q9D4M9 431 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Mad2l2Q9D752 211 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Psma7Q9Z2U0 248 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Actn4P57780 912 aaKnown RBP12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Kcnb1Q03717 857 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 VrtnQ3SYK4 740 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Shc3Q61120 474 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Zrsr2Q62377 462 aaKnown RBP12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Fkbp3Q62446 224 aaKnown RBP12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 AdpgkQ8VDL4 496 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 AvenQ9D9K3 342 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Plcb1Q9Z1B3 1216 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Ankrd31A0A140LI88 1765 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Aox3G3X982 1335 aa12.84□□□□□ -0.35
Col9a1-202ENSMUST00000088349 Gm28919A0A087WP35 240 aa12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Ankrd35E9Q9D8 996 aa12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 PurbO35295 324 aaKnown RBP12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Pdrg1P59048 133 aa12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Lrrc43Q3V0L5 667 aa12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Znf827Q505G8 1078 aa12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Sco1Q5SUC9 284 aa12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Acbd5Q5XG73 508 aa12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 BcrQ6PAJ1 1270 aa12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 KhnynQ80U38 671 aa12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Bbs9Q811G0 885 aa12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Dclk3Q8BWQ5 790 aa12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Fbxo18Q8K2I9 1042 aa12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Emilin2Q8K482 1074 aa12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 SyncQ9EPM5 470 aa12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Tal1P22091 329 aa12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Alppl2P24823 529 aa12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 NntQ61941 1086 aaKnown RBP12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Mindy1Q76LS9 468 aa12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Hook2Q7TMK6 716 aa12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Cracr2bQ80ZJ8 394 aa12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Sf3b3Q921M3 1217 aaKnown RBP12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Jag1Q9QXX0 1218 aa12.83□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Gm3893E9Q1I1 302 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Il15P48346 162 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Fam107bQ3TGF2 131 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Kctd19Q562E2 927 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Krt42Q6IFX2 452 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Parp10Q8CIE4 960 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Syce1Q9D495 329 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Ccdc105Q9D4K7 499 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 March8Q9DBD2 286 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Ndst4Q9EQW8 872 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Tfap4Q9JIZ5 338 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Nfu1Q9QZ23 255 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Orc1Q9Z1N2 840 aaKnown RBP12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Arap2Q8BZ05 1703 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 InhbeO08717 350 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Men1O88559 611 aaKnown RBP12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 SarsP26638 512 aaKnown RBP12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Surf6P70279 355 aaKnown RBP12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Maip1Q8BHE8 291 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Cc2d1bQ8BRN9 848 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 KynuQ9CXF0 464 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Coro7Q9D2V7 922 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Gm45208A0A140LJ36 292 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 1700003F12RikA2AKE5 210 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Npy5rO70342 466 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Abcb4P21440 1276 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 GscQ02591 256 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Acot10Q32MW3 439 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Zmym1Q3TJB1 983 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Lrrc55Q3UY51 311 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Exoc3Q6KAR6 755 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 LRWD1Q8BUI3 648 aaKnown RBP12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Lrit1Q8K099 624 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 GlyctkQ8QZY2 523 aa12.82□□□□□ -0.36
Col9a1-202ENSMUST00000088349 Ppp2r5dQ91V89 594 aa12.82□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 19.7 ms