RNA–Protein interactions for RNA: ENSMUST00000040111.9

Ttc28-201, Transcript of Tetratricopeptide repeat protein 28, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Ttc28, Length 10,780 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28-201ENSMUST00000040111 Sesn2P58043 480 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Clasp2Q8BRT1 1286 aaKnown RBP9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Msh6P54276 1358 aaKnown RBP9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Adcy7P51829 1099 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Cdr2P97817 455 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Otud5Q3U2S4 566 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Qrich1Q3UA37 777 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Fhdc1Q3ULZ2 1149 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Znf496Q5SXI5 585 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Pcdha7Q91Y13 937 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 StrbpQ91WM1 672 aaKnown RBP9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Osbpl1aQ91XL9 950 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Gm7356A0A087WSA6 508 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 DgkkE9Q7N4 1118 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Gm6583E9Q8Z1 469 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Gm5592Q3V0A6 857 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Spata2Q8K004 515 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Snx1Q9WV80 522 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Mapk4Q6P5G0 583 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Rsad2Q8CBB9 362 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Cep57Q8CEE0 500 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Sdr42e1Q9D665 394 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Kdm5aQ3UXZ9 1690 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Myo6Q64331 1265 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Tubb2aQ7TMM9 445 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Sulf1Q8K007 870 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Tubb2bQ9CWF2 445 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Gfpt2Q9Z2Z9 682 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Ccdc24E9PUW8 296 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Gm20425E9Q035 978 aaKnown RBP9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Krt90E9Q1Z0 538 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Clec11aO88200 328 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 SrprbP47758 269 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Ccdc189Q6NZQ0 333 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Ppfia2Q8BSS9 1257 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Washc1Q8VDD8 475 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Prg3Q9JL95 222 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Ppp2r3dQ9Z176 491 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Trove2O08848 538 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Micall1Q8BGT6 870 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Luc7l3Q5SUF2 432 aaKnown RBP9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Slc51bQ80WK2 128 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Tmem119Q8R138 280 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Gdap1l1Q8VE33 370 aa9.6□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Samsn1P57725 372 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Pde1bQ01065 535 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Vps52Q8C754 723 aaKnown RBP9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Hic2Q9JLZ6 619 aaKnown RBP9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Gcc2Q8CHG3 1679 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Gm28042B7ZCM9 1014 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Stoml1Q8CI66 399 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Zscan25B2RX31 543 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Card6E9PWH2 1175 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 SbdsP70122 250 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Acot6Q32Q92 419 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Rnf168Q80XJ2 565 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Pak2Q8CIN4 524 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 1700016D06RikQ9DAA5 166 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Speer2E9Q9U2 264 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Ms4a1P19437 291 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Wdr27Q8C5V5 780 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Kif1bQ60575 1816 aaKnown RBP9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 1700016G14RikA0A286YCZ6 238 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Sstr3P30935 428 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Dnm2P39054 870 aaKnown RBP9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 ClgnP52194 611 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Fam133bQ9CVI2 245 aaKnown RBP9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Cmtm5Q9D6G9 156 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Ybx3Q9JKB3 361 aaKnown RBP9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Lmo7E9PYF4 1699 aaKnown RBP9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Stag2O35638 1231 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Mum1l1Q4VA55 681 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Znf365Q8BG89 408 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Sec63Q8VHE0 760 aaKnown RBP9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Xpo5Q924C1 1204 aaKnown RBP9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 DffaO54786 331 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Tal1P22091 329 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Birc2Q62210 612 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Rmdn1Q9DCV4 305 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Tmod3Q9JHJ0 352 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Add2Q9QYB8 725 aa9.59□□□□□ -0.87
Ttc28-201ENSMUST00000040111 Lekr1B2RVN1 116 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Hirip3Q8BLH7 601 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Lrrc23O35125 340 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 BhmtO35490 407 aaKnown RBP9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Taok1Q5F2E8 1001 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Dclk2Q6PGN3 756 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Cyfip1Q7TMB8 1253 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Krt222Q8CCX5 294 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 HscbQ8K3A0 234 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Atp2a1Q8R429 994 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Ncf2O70145 525 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Trim21Q62191 470 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Ppp2r5aQ6PD03 486 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Armcx3Q8BHS6 379 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Mx2Q9WVP9 655 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Brpf3B2KF05 1204 aaKnown RBP9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Dnaaf5B9EJR8 853 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 Becn2P0DM65 447 aa9.58□□□□□ -0.88
Ttc28-201ENSMUST00000040111 ZfaP23607 742 aa9.58□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 64.5 ms