RNA–Protein interactions for RNA: ENSMUST00000038188.13

Limch1-201, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

TSL 1 (best) BASIC

Gene Limch1, Length 5,903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-201ENSMUST00000038188 Traf3ip3Q8C0G2 513 aa11.71□□□□□ -0.53
Limch1-201ENSMUST00000038188 Acat1Q8QZT1 424 aa11.71□□□□□ -0.53
Limch1-201ENSMUST00000038188 Atp11bQ6DFW5 1175 aa11.71□□□□□ -0.53
Limch1-201ENSMUST00000038188 Tmc4Q7TQ65 694 aa11.71□□□□□ -0.53
Limch1-201ENSMUST00000038188 Tmco3Q8BH01 678 aa11.71□□□□□ -0.53
Limch1-201ENSMUST00000038188 Stxbp5Q8K400 1152 aaKnown RBP11.71□□□□□ -0.53
Limch1-201ENSMUST00000038188 Vwa1Q8R2Z5 415 aa11.71□□□□□ -0.53
Limch1-201ENSMUST00000038188 Lgr6Q3UVD5 967 aa11.71□□□□□ -0.53
Limch1-201ENSMUST00000038188 Ccdc148Q6P5U8 527 aa11.71□□□□□ -0.53
Limch1-201ENSMUST00000038188 Tex2Q6ZPJ0 1128 aaKnown RBP11.71□□□□□ -0.53
Limch1-201ENSMUST00000038188 4921504E06RikQ8CET2 560 aa11.71□□□□□ -0.53
Limch1-201ENSMUST00000038188 Vmn2r121A2BE32 847 aa11.71□□□□□ -0.54
Limch1-201ENSMUST00000038188 Cetn3O35648 167 aa11.71□□□□□ -0.54
Limch1-201ENSMUST00000038188 Mmp14P53690 582 aa11.71□□□□□ -0.54
Limch1-201ENSMUST00000038188 Hmgb1P63158 215 aaKnown RBP11.71□□□□□ -0.54
Limch1-201ENSMUST00000038188 Ift88Q61371 824 aa11.71□□□□□ -0.54
Limch1-201ENSMUST00000038188 Bco2Q99NF1 532 aa11.71□□□□□ -0.54
Limch1-201ENSMUST00000038188 Ska2Q9CR46 120 aa11.71□□□□□ -0.54
Limch1-201ENSMUST00000038188 Apol11aE9PZG0 334 aa11.71□□□□□ -0.54
Limch1-201ENSMUST00000038188 Usp17ldG5E8G2 545 aa11.71□□□□□ -0.54
Limch1-201ENSMUST00000038188 Usp17lcG5E8I7 545 aa11.71□□□□□ -0.54
Limch1-201ENSMUST00000038188 IvlP48997 467 aa11.71□□□□□ -0.54
Limch1-201ENSMUST00000038188 Mark3Q03141 753 aa11.71□□□□□ -0.54
Limch1-201ENSMUST00000038188 Rtkn2Q14B46 604 aa11.71□□□□□ -0.54
Limch1-201ENSMUST00000038188 Zrsr2Q62377 462 aaKnown RBP11.71□□□□□ -0.54
Limch1-201ENSMUST00000038188 Slc44a1Q6X893 653 aa11.71□□□□□ -0.54
Limch1-201ENSMUST00000038188 6820408C15RikQ8BJX2 354 aa11.71□□□□□ -0.54
Limch1-201ENSMUST00000038188 Atp1a4Q9WV27 1032 aa11.71□□□□□ -0.54
Limch1-201ENSMUST00000038188 Nrxn1Q9CS84 1514 aa11.71□□□□□ -0.54
Limch1-201ENSMUST00000038188 Stx1aO35526 288 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Ap1b1O35643 943 aaKnown RBP11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Lig1P37913 916 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Slain1Q68FF7 579 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Cyfip1Q7TMB8 1253 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Rbm34Q8C5L7 375 aaKnown RBP11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Trim32Q8CH72 655 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Nop14Q8R3N1 860 aaKnown RBP11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Tgm5Q9D7I9 724 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Pold3Q9EQ28 462 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 SetQ9EQU5 289 aaKnown RBP11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Jakmip2D3YXK0 820 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 A430078G23RikE9Q7Y4 484 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Nr1i2O54915 431 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Paxbp1P58501 919 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 RimklbQ80WS1 387 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Gga1Q8R0H9 635 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 PolkQ9QUG2 852 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Syce3B5KM66 88 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Pdzrn4E9PUZ9 1014 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Tcp10bE9PYJ0 438 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Tcp10cE9Q046 482 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Pnmal2G3X9N3 661 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Gdap1O88741 358 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Nek1P51954 1203 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Pdrg1P59048 133 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Sox10Q04888 466 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Olfr390Q8VEZ7 311 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Armc9Q9D2I5 817 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Zkscan16A2ALW2 728 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Nsun2Q1HFZ0 757 aaKnown RBP11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Trappc10Q3TLI0 1259 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Siglec10Q80ZE3 688 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Ces1fQ91WU0 561 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Mageb3Q9D2H4 330 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Gm42641I6L9G2 585 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 AtripQ8BMG1 785 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Def6Q8C2K1 630 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Nol6Q8R5K4 1152 aaKnown RBP11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Vta1Q9CR26 309 aa11.7□□□□□ -0.54
Limch1-201ENSMUST00000038188 Senp5Q6NXL6 749 aa11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 Rpf1Q7TND5 349 aaKnown RBP11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 EmsyQ8BMB0 1264 aaKnown RBP11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 LpxnQ99N69 386 aa11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 Sdr42e1Q9D665 394 aa11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 Tnni1Q9WUZ5 187 aa11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 Gm4981Q3ULJ8 291 aa11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 Vil1Q62468 827 aa11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 Peg10Q7TN75 958 aaKnown RBP11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 Rasgrp4Q8BTM9 673 aa11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 Lrrd1Q8C0R9 853 aa11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 Tlr2Q9QUN7 784 aa11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 Sycp2lA0A0M3U1B0 842 aa11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 BhmtO35490 407 aaKnown RBP11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 Cxcl9P18340 126 aa11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 Pde6bP23440 856 aa11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 SsbP32067 415 aaKnown RBP11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 Adcy7P51829 1099 aa11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 HmgcrQ01237 887 aa11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 Trim56Q80VI1 734 aaKnown RBP11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 Vmn2r87E9PZX4 848 aa11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 Ass1P16460 412 aa11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 Ankrd13cQ3UX43 541 aa11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 Zhx2Q8C0C0 836 aaKnown RBP11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 Vmn1r203Q8R273 311 aa11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 TbcbQ9D1E6 244 aa11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 Kif9Q9WV04 790 aa11.69□□□□□ -0.54
Limch1-201ENSMUST00000038188 TdgP56581 421 aa11.68□□□□□ -0.54
Limch1-201ENSMUST00000038188 ItkQ03526 625 aa11.68□□□□□ -0.54
Limch1-201ENSMUST00000038188 Tex35Q14BK3 207 aa11.68□□□□□ -0.54
Limch1-201ENSMUST00000038188 Srrm1Q52KI8 946 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 18.7 ms