RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Uhrf1bp1B2KF50 1429 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Slc27a3O88561 667 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Gucy2cQ3UWA6 1072 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 FibpQ9JI19 357 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Dach1Q9QYB2 751 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 A630010A05RikA9C473 232 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 IkbkbO88351 757 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Mier3Q3UHF3 551 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Zbtb40Q6PCS8 1258 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 HdlbpQ8VDJ3 1268 aaKnown RBP11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Hps3Q91VB4 1002 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Dbndd2Q9CRD4 158 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Adrm1Q9JKV1 407 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Ecel1Q9JMI0 775 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Stk39Q9Z1W9 556 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Uhrf1bp1lA2RSJ4 1457 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Rtl9Q32KG4 1339 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 YwhaeP62259 255 aaKnown RBP11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Ndst4Q9EQW8 872 aa11.04□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Vsnl1P62761 191 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Arhgap17Q3UIA2 846 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Sytl1Q99N80 567 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Zmat2Q9CPW7 199 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 HpdP49429 393 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Srrm1Q52KI8 946 aaKnown RBP11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Fam161bQ8CB59 589 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Tspyl4Q8VD63 406 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Tnpo2Q99LG2 887 aaKnown RBP11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Ranbp17Q99NF8 1088 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 MesdQ9ERE7 224 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Azi2Q9QYP6 405 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Ap1g2O88512 791 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Pla2g4eQ50L42 875 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Gm12185Q5NCB2 835 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Vil1Q62468 827 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Vat1lQ80TB8 417 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Pank4Q80YV4 820 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Llcfc1Q9D9P8 108 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Irx5Q9JKQ4 484 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Gli2Q0VGT2 1544 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 H2afxP27661 143 aaKnown RBP11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Tex9Q9D845 387 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 PapolbQ9WVP6 641 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Gm4758L7N258 96 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Krt87Q6IMF0 495 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Ccdc50Q810U5 305 aaKnown RBP11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Taco1Q8K0Z7 294 aaKnown RBP11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Gipc1Q9Z0G0 333 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Syde2E9PUP1 1314 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 GfapP03995 430 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Nek1P51954 1203 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Pls1Q3V0K9 630 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Pcdhgc5Q91XW9 944 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Dnajc3Q91YW3 504 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Ssfa2Q922B9 1252 aa11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Znf518aB2RRF6 1478 aaKnown RBP11.03□□□□□ -0.64
Ubr1-201ENSMUST00000028728 InhbaQ04998 424 aa11.02□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Ccdc138Q0VF22 680 aa11.02□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Yipf3Q3UDR8 347 aa11.02□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Myo1gQ5SUA5 1024 aa11.02□□□□□ -0.64
Ubr1-201ENSMUST00000028728 ChukQ60680 745 aa11.02□□□□□ -0.64
Ubr1-201ENSMUST00000028728 GartQ64737 1010 aa11.02□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Ckap2lQ7TS74 745 aa11.02□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Tmod2Q9JKK7 351 aa11.02□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Arhgap4B1AUY3 965 aa11.02□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Terf1P70371 421 aa11.02□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Armc2Q3URY6 854 aa11.02□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Elf1Q60775 612 aa11.02□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Naa35Q6PHQ8 725 aa11.02□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Dzip3Q7TPV2 1204 aa11.02□□□□□ -0.64
Ubr1-201ENSMUST00000028728 PigoQ9JJI6 1093 aa11.02□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Peg12Q9WVA7 283 aa11.02□□□□□ -0.64
Ubr1-201ENSMUST00000028728 Crnkl1P63154 690 aaKnown RBP11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Zbtb38Q3LR78 1197 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Zbtb7bQ64321 544 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Tor4aQ8BH02 426 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 ParnQ8VDG3 624 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Arl6ip4Q9JM93 229 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Tex13cD3YU32 604 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Lipo1J3QME6 396 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Calb1P12658 261 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Fam114a2Q8VE88 497 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Abcc12Q80WJ6 1366 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Kif23E9Q5G3 953 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Cd3dP04235 173 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Bank1Q80VH0 783 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Fbxo18Q8K2I9 1042 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Anapc4Q91W96 807 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 St5Q924W7 1134 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Atp7bQ64446 1462 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 JrklB2RRL2 523 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Snap23O09044 210 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Traf5P70191 558 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Irak1Q62406 710 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Haus6Q6NV99 933 aaKnown RBP11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Ppil4Q9CXG3 492 aaKnown RBP11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Syne3Q4FZC9 975 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Ppp1r12bQ8BG95 976 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Pcdhb5Q91XZ5 792 aa11.02□□□□□ -0.65
Ubr1-201ENSMUST00000028728 Rps6ka2Q9WUT3 733 aa11.02□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 44.4 ms