RNA–Protein interactions for RNA: ENSMUST00000017153.3

Sdc4-201, Transcript of Syndecan-4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc4, Length 2,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4-201ENSMUST00000017153 Caps2Q8BUG5 550 aa13.7□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Triml1Q8BVP1 470 aa13.7□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Nat10Q8K224 1024 aaKnown RBP13.7□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Apobec3Q99J72 440 aaKnown RBP13.7□□□□□ -0.22
Sdc4-201ENSMUST00000017153 MrgbpQ9DAT2 204 aa13.7□□□□□ -0.22
Sdc4-201ENSMUST00000017153 SelenooQ9DBC0 667 aa13.7□□□□□ -0.22
Sdc4-201ENSMUST00000017153 IydQ9DCX8 285 aa13.7□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Rab27aQ9ERI2 221 aa13.7□□□□□ -0.22
Sdc4-201ENSMUST00000017153 ErmapQ9JLN5 566 aa13.7□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Lgr5Q9Z1P4 907 aa13.7□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Vstm4T1NXB5 319 aa13.7□□□□□ -0.22
Sdc4-201ENSMUST00000017153 A0A1W2P7S8 802 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Ppfibp2O35711 882 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Zw10O54692 779 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Nmt2O70311 529 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Npy5rO70342 466 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Hoxd10P28359 340 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 MamstrQ0ZCJ7 421 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Klra7Q60654 280 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Adck2Q6NSR3 617 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Sgsm1Q8BPQ7 1093 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Q8CEZ4 452 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Ccdc80Q8R2G6 949 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Thap2Q9D305 217 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Calml3Q9D6P8 149 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Klhl40Q9D783 621 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Cfap45Q9D9U9 551 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Lonp2Q9DBN5 852 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Ecel1Q9JMI0 775 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Gja10Q9WUS4 505 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Myh15E9Q264 1925 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Myh4Q5SX39 1939 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Bicdl1A0JNT9 577 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 TprnA2AI08 749 aaKnown RBP13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Bpifb4A2BGH0 617 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 MarcksP26645 309 aaKnown RBP13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Larp7Q05CL8 570 aaKnown RBP13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Elf1Q60775 612 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Nfe2l1Q61985 741 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Ncoa7Q6DFV7 943 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Sf3b3Q921M3 1217 aaKnown RBP13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Mfap3Q922T2 349 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Foxo3Q9WVH4 672 aa13.69□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Pbx1P41778 430 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Rpl13P47963 211 aaKnown RBP13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Sem1P60897 70 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 1700013D24RikQ0P521 120 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Ogfod1Q3U0K8 545 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Hspa4Q61316 841 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Pick1Q62083 416 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Rbm12b2Q66JV4 834 aaKnown RBP13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Fgfr1opQ66JX5 399 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Lrrcc1Q69ZB0 1026 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Stn1Q8K2X3 378 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Eva1bQ8K2Y3 164 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Pcdha7Q91Y13 937 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Coro7Q9D2V7 922 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Hip1rQ9JKY5 1068 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Itga2bQ9QUM0 1033 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Arhgap33Q80YF9 1305 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 4932429P05RikA2ADI4 785 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 RpsaP14206 295 aaKnown RBP13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Pola2P33611 600 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Cdc5lQ6A068 802 aaKnown RBP13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Hdac4Q6NZM9 1076 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 RadxQ8C779 850 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Bclaf1Q8K019 919 aaKnown RBP13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Trim29Q8R2Q0 587 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Myo1hQ9D6A1 958 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Msh5Q9QUM7 833 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Col20a1Q923P0 1320 aa13.68□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Nrg3O35181 713 aa13.67□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Api5O35841 504 aaKnown RBP13.67□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Hoxc10P31257 342 aa13.67□□□□□ -0.22
Sdc4-201ENSMUST00000017153 A1cfQ5YD48 595 aa13.67□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Sun2Q8BJS4 731 aa13.67□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Iqcb1Q8BP00 598 aa13.67□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Tlr9Q9EQU3 1032 aa13.67□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Stip1Q60864 543 aaKnown RBP13.67□□□□□ -0.22
Sdc4-201ENSMUST00000017153 McamQ8R2Y2 648 aaKnown RBP13.67□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Ccdc12Q8R344 166 aaKnown RBP13.67□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Psmd6Q99JI4 389 aa13.67□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Vmp1Q99KU0 406 aa13.67□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Rnf138rt1Q9D9M9 248 aa13.67□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Zcchc17Q9ESX4 241 aaKnown RBP13.67□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Sgpp1Q9JI99 430 aa13.67□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Myh13B1AR69 1938 aa13.67□□□□□ -0.22
Sdc4-201ENSMUST00000017153 A0A0U1RNP2 1173 aa13.66□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Nf2P46662 596 aa13.66□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Mars2Q499X9 586 aaKnown RBP13.66□□□□□ -0.22
Sdc4-201ENSMUST00000017153 CtcfQ61164 736 aaKnown RBP13.66□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Utp14bQ6EJB6 756 aaKnown RBP13.66□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Rasal3Q8C2K5 1041 aa13.66□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Gimap7Q8R379 293 aa13.66□□□□□ -0.22
Sdc4-201ENSMUST00000017153 PlgrktQ9D3P8 147 aa13.66□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Mfap3lQ9D3X9 409 aa13.66□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Il20Q9JKV9 176 aa13.66□□□□□ -0.22
Sdc4-201ENSMUST00000017153 NesQ6P5H2 1864 aaKnown RBP13.66□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Cdh15P33146 784 aa13.66□□□□□ -0.22
Sdc4-201ENSMUST00000017153 Ttll12Q3UDE2 639 aa13.66□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms