RNA–Protein interactions for RNA: snR41

snR41, Transcript of C/D box small nucleolar RNA (snoRNA), yeast

Gene snR41, Length 95 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR41	snR41	DBF20	P32328	564 aa		2.63	□□□□□ -1.99
snR41	snR41	YEL045C	P32616	141 aa		2.63	□□□□□ -1.99
snR41	snR41	RPS7B	P48164	190 aa	Known RBP	2.63	□□□□□ -1.99
snR41	snR41	RLI1	Q03195	608 aa	Known RBP	2.63	□□□□□ -1.99
snR41	snR41	TEN1	Q07921	160 aa		2.63	□□□□□ -1.99
snR41	snR41	RRP12	Q12754	1228 aa	Known RBP	2.63	□□□□□ -1.99
snR41	snR41	YOL087C	Q99247	1116 aa		2.63	□□□□□ -1.99
snR41	snR41	PUT3	P25502	979 aa	Predicted RBP	2.62	□□□□□ -1.99
snR41	snR41	SYN8	P31377	255 aa		2.62	□□□□□ -1.99
snR41	snR41	YKL100C	P34248	587 aa		2.62	□□□□□ -1.99
snR41	snR41	SHO1	P40073	367 aa		2.62	□□□□□ -1.99
snR41	snR41	ALG8	P40351	577 aa		2.62	□□□□□ -1.99
snR41	snR41	LPD1	P09624	499 aa	Known RBP	2.61	□□□□□ -1.99
snR41	snR41	SPT15	P13393	240 aa	Known RBP	2.61	□□□□□ -1.99
snR41	snR41	YCR007C	P25354	239 aa		2.61	□□□□□ -1.99
snR41	snR41	PUP3	P25451	205 aa	Known RBP	2.61	□□□□□ -1.99
snR41	snR41	CBF2	P32504	956 aa		2.61	□□□□□ -1.99
snR41	snR41	HAT2	P39984	401 aa		2.61	□□□□□ -1.99
snR41	snR41	YJR154W	P47181	346 aa		2.61	□□□□□ -1.99
snR41	snR41	EFM6	P53970	246 aa		2.61	□□□□□ -1.99
snR41	snR41	MSC1	Q03104	513 aa		2.61	□□□□□ -1.99
snR41	snR41	MRPL51	Q06090	140 aa	Predicted RBP	2.61	□□□□□ -1.99
snR41	snR41	ENT4	Q07872	247 aa		2.61	□□□□□ -1.99
snR41	snR41	NCE102	Q12207	173 aa	RIP-Chip data	2.61	□□□□□ -1.99	not detected
snR41	snR41	CTF3	Q12748	733 aa		2.61	□□□□□ -1.99
snR41	snR41	VMA16	P23968	213 aa		2.6	□□□□□ -1.99
snR41	snR41	YKL023W	P36103	277 aa	Known RBP	2.6	□□□□□ -1.99
snR41	snR41	NUP133	P36161	1157 aa		2.6	□□□□□ -1.99
snR41	snR41	PSY4	P38193	441 aa		2.6	□□□□□ -1.99
snR41	snR41	RFS1	P38234	210 aa	Known RBP	2.6	□□□□□ -1.99
snR41	snR41	PTH1	P38876	190 aa	Known RBP	2.6	□□□□□ -1.99
snR41	snR41	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.6	□□□□□ -1.99	not detected
snR41	snR41	APT1	P49435	187 aa	Known RBP	2.6	□□□□□ -1.99
snR41	snR41	WSC2	P53832	503 aa		2.6	□□□□□ -1.99
snR41	snR41	SHR3	Q02774	210 aa		2.6	□□□□□ -1.99
snR41	snR41	SLD5	Q03406	294 aa		2.6	□□□□□ -1.99
snR41	snR41	RIX7	Q07844	837 aa	Known RBP	2.6	□□□□□ -1.99
snR41	snR41	YOR365C	Q08844	703 aa		2.6	□□□□□ -1.99
snR41	snR41	YPL272C	Q08984	517 aa		2.6	□□□□□ -1.99
snR41	snR41	NBP2	Q12163	236 aa		2.6	□□□□□ -1.99
snR41	snR41	SUC2	P00724	532 aa		2.59	□□□□□ -1.99
snR41	snR41	BOS1	P25385	244 aa		2.59	□□□□□ -1.99
snR41	snR41	YIM1	P28625	365 aa		2.59	□□□□□ -1.99
snR41	snR41	SPR1	P32603	445 aa		2.59	□□□□□ -1.99
snR41	snR41	YBL055C	P34220	418 aa	Predicted RBP	2.59	□□□□□ -1.99
snR41	snR41	MTC6	P38849	526 aa		2.59	□□□□□ -1.99
snR41	snR41	YER010C	P40011	234 aa		2.59	□□□□□ -1.99
snR41	snR41	SAP185	P40856	1058 aa		2.59	□□□□□ -1.99
snR41	snR41	SNG1	P46950	547 aa		2.59	□□□□□ -1.99
snR41	snR41	SIP4	P46954	829 aa		2.59	□□□□□ -1.99
snR41	snR41	SDT1	P53078	280 aa		2.59	□□□□□ -1.99
snR41	snR41	YGL039W	P53183	348 aa	Known RBP	2.59	□□□□□ -1.99
snR41	snR41	DRN1	P53255	507 aa	Known RBP	2.59	□□□□□ -1.99
snR41	snR41	YGR127W	P53275	312 aa		2.59	□□□□□ -1.99
snR41	snR41	BUD32	P53323	261 aa		2.59	□□□□□ -1.99
snR41	snR41	DPB4	Q04603	196 aa	Known RBP	2.59	□□□□□ -1.99
snR41	snR41	PAL1	Q05518	499 aa	Known RBP	2.59	□□□□□ -1.99
snR41	snR41	VPS74	Q06385	345 aa		2.59	□□□□□ -1.99
snR41	snR41	YOR387C	Q08910	206 aa		2.59	□□□□□ -1.99
snR41	snR41	ERV2	Q12284	196 aa		2.59	□□□□□ -1.99
snR41	snR41	SUP35	P05453	685 aa	Known RBP	2.58	□□□□□ -2
snR41	snR41	SGF29	P25554	259 aa		2.58	□□□□□ -2
snR41	snR41	FUN19	P28003	413 aa	Predicted RBP	2.58	□□□□□ -2
snR41	snR41	FRE1	P32791	686 aa		2.58	□□□□□ -2
snR41	snR41	PTH2	P34222	208 aa		2.58	□□□□□ -2
snR41	snR41	KTR3	P38130	404 aa	Predicted RBP	2.58	□□□□□ -2
snR41	snR41	SRO77	P38163	1010 aa		2.58	□□□□□ -2
snR41	snR41	SLX1	P38324	304 aa		2.58	□□□□□ -2
snR41	snR41	YHR210C	P38893	341 aa		2.58	□□□□□ -2
snR41	snR41	FAR3	P46671	204 aa		2.58	□□□□□ -2
snR41	snR41	DSD1	P53095	428 aa		2.58	□□□□□ -2
snR41	snR41	DUG3	P53871	357 aa		2.58	□□□□□ -2
snR41	snR41	SNO4	Q04902	237 aa		2.58	□□□□□ -2
snR41	snR41	MHR1	Q06630	226 aa		2.58	□□□□□ -2
snR41	snR41	HSP33	Q08914	237 aa	Known RBP	2.58	□□□□□ -2
snR41	snR41	HSP32	Q08992	237 aa		2.58	□□□□□ -2
snR41	snR41	SSM4	P40318	1319 aa		2.58	□□□□□ -2
snR41	snR41	KGD1	P20967	1014 aa	Known RBP	2.57	□□□□□ -2
snR41	snR41	ISY1	P21374	235 aa	Predicted RBP	2.57	□□□□□ -2
snR41	snR41	NAM9	P27929	486 aa		2.57	□□□□□ -2
snR41	snR41	YME1	P32795	747 aa		2.57	□□□□□ -2
snR41	snR41	AXL2	P38928	823 aa		2.57	□□□□□ -2
snR41	snR41	YGR210C	P42942	411 aa		2.57	□□□□□ -2
snR41	snR41	PTR3	P43606	678 aa		2.57	□□□□□ -2
snR41	snR41	LYS4	P49367	693 aa	Predicted RBP	2.57	□□□□□ -2
snR41	snR41	IRC15	Q02733	499 aa		2.57	□□□□□ -2
snR41	snR41	LSP1	Q12230	341 aa	Known RBP	2.57	□□□□□ -2
snR41	snR41	SOD1	P00445	154 aa	Known RBP	2.56	□□□□□ -2
snR41	snR41	UTR4	P32626	227 aa		2.56	□□□□□ -2
snR41	snR41	PAD1	P33751	242 aa	Known RBP RIP-Chip data	2.56	□□□□□ -2	not detected
snR41	snR41	RPL32	P38061	130 aa	Known RBP	2.56	□□□□□ -2
snR41	snR41	ARC1	P46672	376 aa	Known RBP	2.56	□□□□□ -2
snR41	snR41	YGR126W	P53274	230 aa		2.56	□□□□□ -2
snR41	snR41	GTR1	Q00582	310 aa		2.56	□□□□□ -2
snR41	snR41	RRN11	Q04712	507 aa		2.56	□□□□□ -2
snR41	snR41	TCO89	Q08921	799 aa		2.56	□□□□□ -2
snR41	snR41	TMS1	Q12116	473 aa		2.56	□□□□□ -2
snR41	snR41	IMG1	P25626	169 aa		2.55	□□□□□ -2
snR41	snR41	DEG1	P31115	442 aa	Known RBP	2.55	□□□□□ -2
snR41	snR41	PRS1	P32895	427 aa	Known RBP	2.55	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms