RNA–Protein interactions for RNA: YPR019W

MCM4, Transcript of Essential helicase component of heterohexameric MCM2-7 complexes, yeast

Gene MCM4, Length 2,802 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MCM4	YPR019W	PEX1	P24004	1043 aa		4.88	□□□□□ -1.63
MCM4	YPR019W	WBP1	P33767	430 aa	Known RBP	4.88	□□□□□ -1.63
MCM4	YPR019W	TAT1	P38085	619 aa		4.88	□□□□□ -1.63
MCM4	YPR019W	APN2	P38207	520 aa		4.88	□□□□□ -1.63
MCM4	YPR019W	END3	P39013	349 aa		4.88	□□□□□ -1.63
MCM4	YPR019W	DRN1	P53255	507 aa	Known RBP	4.88	□□□□□ -1.63
MCM4	YPR019W	RPC11	Q04307	110 aa	Predicted RBP	4.88	□□□□□ -1.63
MCM4	YPR019W	STP3	Q05937	343 aa		4.88	□□□□□ -1.63
MCM4	YPR019W	RSA3	Q05942	220 aa	Known RBP	4.88	□□□□□ -1.63
MCM4	YPR019W	AIM6	Q07716	390 aa		4.88	□□□□□ -1.63
MCM4	YPR019W	PUS9	Q12069	462 aa		4.88	□□□□□ -1.63
MCM4	YPR019W	AEP3	Q12089	606 aa		4.88	□□□□□ -1.63
MCM4	YPR019W	GAL3	P13045	520 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	PRO3	P32263	286 aa	Known RBP	4.87	□□□□□ -1.63
MCM4	YPR019W	SSE2	P32590	693 aa	Known RBP	4.87	□□□□□ -1.63
MCM4	YPR019W	CTK2	P46962	323 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	NMD5	P46970	1048 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	YKR011C	Q02209	353 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	MUS81	Q04149	632 aa	Predicted RBP	4.87	□□□□□ -1.63
MCM4	YPR019W	MET3	P08536	511 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	HMG2	P12684	1045 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	KIN2	P13186	1147 aa	Known RBP	4.87	□□□□□ -1.63
MCM4	YPR019W	YAK1	P14680	807 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	SPO7	P18410	259 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	SAG1	P20840	650 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	YIH1	P25637	258 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	IDH2	P28241	369 aa	Known RBP	4.87	□□□□□ -1.63
MCM4	YPR019W	SPR1	P32603	445 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	PET127	P32606	800 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	SEC61	P32915	480 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	SWC5	P38326	303 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	FAD1	P38913	306 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	RPN3	P40016	523 aa	Known RBP	4.87	□□□□□ -1.63
MCM4	YPR019W	YHC3	P47040	408 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	NRT1	Q08485	598 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	YLL067C	Q07888	1374 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	CHL1	P22516	861 aa	Predicted RBP	4.87	□□□□□ -1.63
MCM4	YPR019W	GCD7	P32502	381 aa	Predicted RBP	4.87	□□□□□ -1.63
MCM4	YPR019W	RTC3	P38804	111 aa	Predicted RBP	4.87	□□□□□ -1.63
MCM4	YPR019W	EGD2	P38879	174 aa	Known RBP	4.87	□□□□□ -1.63
MCM4	YPR019W	SUR2	P38992	349 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	IME4	P41833	600 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	BRE2	P43132	505 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	GLG2	P47011	380 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	GCV1	P48015	400 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	RIB4	P50861	169 aa	Predicted RBP	4.87	□□□□□ -1.63
MCM4	YPR019W	YGL036W	P53185	909 aa	Predicted RBP	4.87	□□□□□ -1.63
MCM4	YPR019W	DBP6	P53734	629 aa	Known RBP	4.87	□□□□□ -1.63
MCM4	YPR019W	SPC2	Q04969	178 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	RRG8	Q06109	277 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	GMC2	Q06201	188 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	NOP12	Q08208	459 aa	Known RBP	4.87	□□□□□ -1.63
MCM4	YPR019W	MDM20	Q12387	796 aa	Known RBP	4.87	□□□□□ -1.63
MCM4	YPR019W	FMP16	Q12497	93 aa		4.87	□□□□□ -1.63
MCM4	YPR019W	SEC3	P33332	1336 aa	Known RBP	4.86	□□□□□ -1.63
MCM4	YPR019W	RPL24A	P04449	155 aa	Known RBP	4.86	□□□□□ -1.63
MCM4	YPR019W	VPS33	P20795	691 aa		4.86	□□□□□ -1.63
MCM4	YPR019W	ADH7	P25377	361 aa		4.86	□□□□□ -1.63
MCM4	YPR019W	ICL1	P28240	557 aa	Predicted RBP	4.86	□□□□□ -1.63
MCM4	YPR019W	RAD14	P28519	371 aa		4.86	□□□□□ -1.63
MCM4	YPR019W	TCD2	P36101	447 aa	Known RBP	4.86	□□□□□ -1.63
MCM4	YPR019W	PCL6	P40038	420 aa		4.86	□□□□□ -1.63
MCM4	YPR019W	BOP3	P53958	396 aa		4.86	□□□□□ -1.63
MCM4	YPR019W	YPL108W	Q02872	168 aa	Predicted RBP	4.86	□□□□□ -1.63
MCM4	YPR019W	BSC6	Q08280	497 aa		4.86	□□□□□ -1.63
MCM4	YPR019W	RDR1	Q08904	546 aa		4.86	□□□□□ -1.63
MCM4	YPR019W	FRE3	Q08905	711 aa		4.86	□□□□□ -1.63
MCM4	YPR019W	SRO7	Q12038	1033 aa		4.86	□□□□□ -1.63
MCM4	YPR019W	TCP1	P12612	559 aa	Known RBP	4.86	□□□□□ -1.63
MCM4	YPR019W	SEC63	P14906	663 aa		4.86	□□□□□ -1.63
MCM4	YPR019W	KGD1	P20967	1014 aa	Known RBP	4.86	□□□□□ -1.63
MCM4	YPR019W	UTR1	P21373	530 aa		4.86	□□□□□ -1.63
MCM4	YPR019W	RNR1	P21524	888 aa	Known RBP	4.86	□□□□□ -1.63
MCM4	YPR019W	BMH1	P29311	267 aa	Known RBP	4.86	□□□□□ -1.63
MCM4	YPR019W	APT2	P36973	181 aa		4.86	□□□□□ -1.63
MCM4	YPR019W	POP7	P38291	140 aa		4.86	□□□□□ -1.63
MCM4	YPR019W	CIN1	P40987	1014 aa		4.86	□□□□□ -1.63
MCM4	YPR019W	BUD22	Q04347	519 aa	Known RBP	4.86	□□□□□ -1.63
MCM4	YPR019W	CTS2	Q06350	511 aa		4.86	□□□□□ -1.63
MCM4	YPR019W	ALG6	Q12001	544 aa	Known RBP	4.86	□□□□□ -1.63
MCM4	YPR019W	ARD1	P07347	238 aa	Predicted RBP	4.85	□□□□□ -1.63
MCM4	YPR019W	DPB2	P24482	689 aa	Predicted RBP	4.85	□□□□□ -1.63
MCM4	YPR019W	TYE7	P33122	291 aa	Predicted RBP	4.85	□□□□□ -1.63
MCM4	YPR019W	UBC6	P33296	250 aa	Predicted RBP	4.85	□□□□□ -1.63
MCM4	YPR019W	TUL1	P36096	758 aa		4.85	□□□□□ -1.63
MCM4	YPR019W	RTT107	P38850	1070 aa		4.85	□□□□□ -1.63
MCM4	YPR019W	PUS2	P53167	370 aa		4.85	□□□□□ -1.63
MCM4	YPR019W	SKO1	Q02100	647 aa		4.85	□□□□□ -1.63
MCM4	YPR019W	WSC3	Q12215	556 aa		4.85	□□□□□ -1.63
MCM4	YPR019W	FRS1	P15624	595 aa	Known RBP	4.85	□□□□□ -1.63
MCM4	YPR019W	URA4	P20051	364 aa		4.85	□□□□□ -1.63
MCM4	YPR019W	YKL071W	P36086	256 aa		4.85	□□□□□ -1.63
MCM4	YPR019W	PPS1	P38148	807 aa		4.85	□□□□□ -1.63
MCM4	YPR019W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
MCM4	YPR019W	ARH1	P48360	493 aa		4.85	□□□□□ -1.63
MCM4	YPR019W	CAF130	P53280	1122 aa	Predicted RBP	4.85	□□□□□ -1.63
MCM4	YPR019W	CAB5	Q03941	241 aa		4.85	□□□□□ -1.63
MCM4	YPR019W	PRP45	P28004	379 aa	Predicted RBP	4.84	□□□□□ -1.63
MCM4	YPR019W	IMP3	P32899	183 aa	Predicted RBP	4.84	□□□□□ -1.63
MCM4	YPR019W	TOS1	P38288	455 aa		4.84	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms