RNA–Protein interactions for RNA: YPL193W

RSA1, Transcript of Protein involved in the assembly of 60S ribosomal subunits, yeast

Gene RSA1, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA1	YPL193W	RPR2	P40571	144 aa		2.83	□□□□□ -1.96
RSA1	YPL193W	COS10	P52924	374 aa		2.83	□□□□□ -1.96
RSA1	YPL193W	IMA1	P53051	589 aa		2.83	□□□□□ -1.96
RSA1	YPL193W	FOL1	P53848	824 aa		2.83	□□□□□ -1.96
RSA1	YPL193W	MSS11	Q03825	758 aa		2.83	□□□□□ -1.96
RSA1	YPL193W	HCR1	Q05775	265 aa	Known RBP	2.83	□□□□□ -1.96
RSA1	YPL193W	RRG1	Q12167	365 aa	Predicted RBP	2.83	□□□□□ -1.96
RSA1	YPL193W	FLO11	P08640	1367 aa		2.83	□□□□□ -1.96
RSA1	YPL193W	MIS1	P09440	975 aa	Known RBP	2.82	□□□□□ -1.96
RSA1	YPL193W	BIK1	P11709	440 aa		2.82	□□□□□ -1.96
RSA1	YPL193W	NDC1	P32500	655 aa		2.82	□□□□□ -1.96
RSA1	YPL193W	AXL1	P40851	1208 aa		2.82	□□□□□ -1.96
RSA1	YPL193W	SSP2	Q08646	371 aa		2.82	□□□□□ -1.96
RSA1	YPL193W	ATP2	P00830	511 aa	Known RBP	2.81	□□□□□ -1.96
RSA1	YPL193W	FSH1	P38777	243 aa	Known RBP	2.81	□□□□□ -1.96
RSA1	YPL193W	SOL4	P53315	255 aa		2.81	□□□□□ -1.96
RSA1	YPL193W	YDR034W-B	Q6Q5X2	51 aa		2.81	□□□□□ -1.96
RSA1	YPL193W	TEL1	P38110	2787 aa		2.8	□□□□□ -1.96
RSA1	YPL193W	UBR2	Q07963	1872 aa		2.8	□□□□□ -1.96
RSA1	YPL193W	SSB1	P11484	613 aa	Known RBP	2.8	□□□□□ -1.96
RSA1	YPL193W	MTF1	P14908	341 aa	Known RBP	2.8	□□□□□ -1.96
RSA1	YPL193W	KRE2	P27809	442 aa		2.8	□□□□□ -1.96
RSA1	YPL193W	GAC1	P28006	793 aa		2.8	□□□□□ -1.96
RSA1	YPL193W	YEL045C	P32616	141 aa		2.8	□□□□□ -1.96
RSA1	YPL193W	PTR2	P32901	601 aa		2.8	□□□□□ -1.96
RSA1	YPL193W	TOM20	P35180	183 aa		2.8	□□□□□ -1.96
RSA1	YPL193W	NUP120	P35729	1037 aa		2.8	□□□□□ -1.96
RSA1	YPL193W	PTH1	P38876	190 aa	Known RBP	2.8	□□□□□ -1.96
RSA1	YPL193W	SSB2	P40150	613 aa	Known RBP	2.8	□□□□□ -1.96
RSA1	YPL193W	VPS27	P40343	622 aa	Known RBP	2.8	□□□□□ -1.96
RSA1	YPL193W	PSF2	P40359	213 aa		2.8	□□□□□ -1.96
RSA1	YPL193W	YJR008W	P47085	338 aa		2.8	□□□□□ -1.96
RSA1	YPL193W	RPT4	P53549	437 aa	Known RBP	2.8	□□□□□ -1.96
RSA1	YPL193W	RPM2	Q02773	1202 aa		2.8	□□□□□ -1.96
RSA1	YPL193W	EIS1	Q05050	843 aa	Known RBP	2.8	□□□□□ -1.96
RSA1	YPL193W	PDH1	Q12428	516 aa	Known RBP	2.8	□□□□□ -1.96
RSA1	YPL193W	TOR1	P35169	2470 aa		2.8	□□□□□ -1.96
RSA1	YPL193W	IRA2	P19158	3079 aa		2.79	□□□□□ -1.96
RSA1	YPL193W	SPO16	P17122	198 aa		2.79	□□□□□ -1.96
RSA1	YPL193W	MIA40	P36046	403 aa		2.79	□□□□□ -1.96
RSA1	YPL193W	YBR138C	P38277	524 aa		2.79	□□□□□ -1.96
RSA1	YPL193W	TIF5	P38431	405 aa	Known RBP	2.79	□□□□□ -1.96
RSA1	YPL193W	SPL2	P38839	148 aa		2.79	□□□□□ -1.96
RSA1	YPL193W	ZDS2	P54786	942 aa		2.79	□□□□□ -1.96
RSA1	YPL193W	ATG26	Q06321	1198 aa		2.79	□□□□□ -1.96
RSA1	YPL193W	VAM6	Q07468	1049 aa		2.79	□□□□□ -1.96
RSA1	YPL193W	FLO1	P32768	1537 aa		2.78	□□□□□ -1.96
RSA1	YPL193W	ECM29	P38737	1868 aa		2.78	□□□□□ -1.96
RSA1	YPL193W	SSK22	P25390	1331 aa	Predicted RBP	2.78	□□□□□ -1.96
RSA1	YPL193W	DUR1,2	P32528	1835 aa	Known RBP	2.78	□□□□□ -1.96
RSA1	YPL193W	HIP1	P06775	603 aa		2.78	□□□□□ -1.96
RSA1	YPL193W	PIF1	P07271	859 aa		2.78	□□□□□ -1.96
RSA1	YPL193W	MTC4	P38335	694 aa	Known RBP	2.78	□□□□□ -1.96
RSA1	YPL193W	YHR131C	P38835	850 aa		2.78	□□□□□ -1.96
RSA1	YPL193W	SMK1	P41808	388 aa		2.78	□□□□□ -1.96
RSA1	YPL193W	PAP2	P53632	584 aa	Known RBP	2.78	□□□□□ -1.96
RSA1	YPL193W	CPR6	P53691	371 aa	Known RBP	2.78	□□□□□ -1.96
RSA1	YPL193W	ERP1	Q05359	219 aa	Known RBP	2.78	□□□□□ -1.96
RSA1	YPL193W	GRC3	Q07845	632 aa		2.78	□□□□□ -1.96
RSA1	YPL193W	AYT1	Q12226	474 aa		2.78	□□□□□ -1.96
RSA1	YPL193W	SST2	P11972	698 aa	Known RBP	2.77	□□□□□ -1.97
RSA1	YPL193W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	2.77	□□□□□ -1.97	not detected
RSA1	YPL193W	MRPL36	P36531	177 aa		2.77	□□□□□ -1.97
RSA1	YPL193W	TRS130	Q03660	1102 aa		2.77	□□□□□ -1.97
RSA1	YPL193W	PRP42	Q03776	544 aa	Known RBP	2.77	□□□□□ -1.97
RSA1	YPL193W	PAL1	Q05518	499 aa	Known RBP	2.77	□□□□□ -1.97
RSA1	YPL193W	ADE13	Q05911	482 aa	Known RBP	2.77	□□□□□ -1.97
RSA1	YPL193W	CDC45	Q08032	650 aa		2.77	□□□□□ -1.97
RSA1	YPL193W	AHC1	Q12433	566 aa		2.77	□□□□□ -1.97
RSA1	YPL193W	ARP6	Q12509	438 aa		2.77	□□□□□ -1.97
RSA1	YPL193W	TMA7	Q3E764	64 aa	Known RBP	2.77	□□□□□ -1.97
RSA1	YPL193W	TYR1	P20049	452 aa		2.76	□□□□□ -1.97
RSA1	YPL193W	SEC62	P21825	274 aa		2.76	□□□□□ -1.97
RSA1	YPL193W	SPC110	P32380	944 aa		2.76	□□□□□ -1.97
RSA1	YPL193W	YNK1	P36010	153 aa	Known RBP	2.76	□□□□□ -1.97
RSA1	YPL193W	ARP1	P38696	384 aa		2.76	□□□□□ -1.97
RSA1	YPL193W	SPC72	P39723	622 aa		2.76	□□□□□ -1.97
RSA1	YPL193W	ECM30	Q06673	1274 aa		2.76	□□□□□ -1.97
RSA1	YPL193W	CSR1	Q06705	408 aa	Known RBP	2.76	□□□□□ -1.97
RSA1	YPL193W	TMC1	Q08422	150 aa	Predicted RBP	2.76	□□□□□ -1.97
RSA1	YPL193W	MPD2	Q99316	277 aa		2.76	□□□□□ -1.97
RSA1	YPL193W	TOR2	P32600	2474 aa	Known RBP	2.76	□□□□□ -1.97
RSA1	YPL193W	FAB1	P34756	2278 aa		2.75	□□□□□ -1.97
RSA1	YPL193W	HEM2	P05373	342 aa		2.75	□□□□□ -1.97
RSA1	YPL193W	SNF3	P10870	884 aa		2.75	□□□□□ -1.97
RSA1	YPL193W	LCB1	P25045	558 aa	Known RBP	2.75	□□□□□ -1.97
RSA1	YPL193W	HXT1	P32465	570 aa		2.75	□□□□□ -1.97
RSA1	YPL193W	SIP2	P34164	415 aa	Known RBP	2.75	□□□□□ -1.97
RSA1	YPL193W	UIP5	P36137	443 aa		2.75	□□□□□ -1.97
RSA1	YPL193W	SRO77	P38163	1010 aa		2.75	□□□□□ -1.97
RSA1	YPL193W	KEL1	P38853	1164 aa	Known RBP	2.75	□□□□□ -1.97
RSA1	YPL193W	IDP2	P41939	412 aa		2.75	□□□□□ -1.97
RSA1	YPL193W	CTF18	P49956	741 aa		2.75	□□□□□ -1.97
RSA1	YPL193W	IRC4	Q03036	179 aa		2.75	□□□□□ -1.97
RSA1	YPL193W	UBX2	Q04228	584 aa		2.75	□□□□□ -1.97
RSA1	YPL193W	RPL20A	P0CX23	172 aa	Known RBP	2.74	□□□□□ -1.97
RSA1	YPL193W	RPL20B	P0CX24	172 aa	Predicted RBP	2.74	□□□□□ -1.97
RSA1	YPL193W	CLB4	P24871	460 aa		2.74	□□□□□ -1.97
RSA1	YPL193W	AFG3	P39925	761 aa		2.74	□□□□□ -1.97
RSA1	YPL193W	TPM2	P40414	161 aa		2.74	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 733.8 ms