RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W SNM1P40993 198 aa2.19□□□□□ -2.06
SEC16YPL085W GCN20P43535 752 aaKnown RBP2.19□□□□□ -2.06
SEC16YPL085W SGF73P53165 657 aa2.19□□□□□ -2.06
SEC16YPL085W MEH1Q02205 184 aa2.19□□□□□ -2.06
SEC16YPL085W NUP116Q02630 1113 aa2.19□□□□□ -2.06
SEC16YPL085W KAP120Q02932 1032 aa2.19□□□□□ -2.06
SEC16YPL085W TY2A-DR2Q03483 438 aa2.19□□□□□ -2.06
SEC16YPL085W TRS120Q04183 1289 aa2.19□□□□□ -2.06
SEC16YPL085W ATG29Q12092 213 aa2.19□□□□□ -2.06
SEC16YPL085W TY2A-BQ12260 438 aa2.19□□□□□ -2.06
SEC16YPL085W TY2A-OR2Q12293 438 aa2.19□□□□□ -2.06
SEC16YPL085W TY2A-DR1Q12392 438 aa2.19□□□□□ -2.06
SEC16YPL085W TY2A-OR1Q12439 438 aa2.19□□□□□ -2.06
SEC16YPL085W DCP1Q12517 231 aaPredicted RBP2.19□□□□□ -2.06
SEC16YPL085W TY2A-DR3Q99303 438 aa2.19□□□□□ -2.06
SEC16YPL085W CDC7P06243 507 aa2.19□□□□□ -2.06
SEC16YPL085W SAT4P25333 603 aaKnown RBP2.19□□□□□ -2.06
SEC16YPL085W ITR1P30605 584 aa2.19□□□□□ -2.06
SEC16YPL085W SRP40P32583 406 aaPredicted RBP2.19□□□□□ -2.06
SEC16YPL085W PET127P32606 800 aa2.19□□□□□ -2.06
SEC16YPL085W UTP11P34247 250 aaPredicted RBP2.19□□□□□ -2.06
SEC16YPL085W SDS22P36047 338 aa2.19□□□□□ -2.06
SEC16YPL085W KTR3P38130 404 aaPredicted RBP2.19□□□□□ -2.06
SEC16YPL085W YHR078WP38799 552 aa2.19□□□□□ -2.06
SEC16YPL085W SAP1P39955 897 aaKnown RBP2.19□□□□□ -2.06
SEC16YPL085W SCS2P40075 244 aaKnown RBP2.19□□□□□ -2.06
SEC16YPL085W LCP5P40079 357 aaPredicted RBP2.19□□□□□ -2.06
SEC16YPL085W YIL054WP40524 105 aa2.19□□□□□ -2.06
SEC16YPL085W MRK1P50873 501 aa2.19□□□□□ -2.06
SEC16YPL085W SOV1Q04748 898 aa2.19□□□□□ -2.06
SEC16YPL085W PIG1Q06216 648 aa2.19□□□□□ -2.06
SEC16YPL085W SLD7Q08457 257 aa2.19□□□□□ -2.06
SEC16YPL085W MSB2P32334 1306 aa2.19□□□□□ -2.06
SEC16YPL085W MSS116P15424 664 aaKnown RBP2.19□□□□□ -2.06
SEC16YPL085W SRV2P17555 526 aaKnown RBP2.19□□□□□ -2.06
SEC16YPL085W PMA2P19657 947 aa2.19□□□□□ -2.06
SEC16YPL085W VPS33P20795 691 aa2.19□□□□□ -2.06
SEC16YPL085W MGR1P25573 417 aa2.19□□□□□ -2.06
SEC16YPL085W VPS51P36116 164 aa2.19□□□□□ -2.06
SEC16YPL085W YKR023WP36119 530 aaKnown RBP2.19□□□□□ -2.06
SEC16YPL085W DBP7P36120 742 aaKnown RBP2.19□□□□□ -2.06
SEC16YPL085W MRPL15P36523 253 aa2.19□□□□□ -2.06
SEC16YPL085W SSN3P39073 555 aa2.19□□□□□ -2.06
SEC16YPL085W YAL037WP39728 267 aa2.19□□□□□ -2.06
SEC16YPL085W SER3P40054 469 aa2.19□□□□□ -2.06
SEC16YPL085W PMT4P46971 762 aa2.19□□□□□ -2.06
SEC16YPL085W EFM3P47163 339 aa2.19□□□□□ -2.06
SEC16YPL085W ORC5P50874 479 aa2.19□□□□□ -2.06
SEC16YPL085W STR3P53101 465 aaKnown RBP2.19□□□□□ -2.06
SEC16YPL085W NQM1P53228 333 aaPredicted RBP2.19□□□□□ -2.06
SEC16YPL085W MGR3Q04472 501 aa2.19□□□□□ -2.06
SEC16YPL085W RRP12Q12754 1228 aaKnown RBP2.19□□□□□ -2.06
SEC16YPL085W GCD1P09032 578 aaPredicted RBP2.19□□□□□ -2.06
SEC16YPL085W TFS1P14306 219 aa2.19□□□□□ -2.06
SEC16YPL085W RNR1P21524 888 aaKnown RBP2.19□□□□□ -2.06
SEC16YPL085W IDP1P21954 428 aaKnown RBP2.19□□□□□ -2.06
SEC16YPL085W ATP12P22135 325 aa2.19□□□□□ -2.06
SEC16YPL085W RFA1P22336 621 aaKnown RBP2.19□□□□□ -2.06
SEC16YPL085W SUR1P33300 382 aa2.19□□□□□ -2.06
SEC16YPL085W LRG1P35688 1017 aa2.19□□□□□ -2.06
SEC16YPL085W OAF3P36023 863 aa2.19□□□□□ -2.06
SEC16YPL085W ATG14P38270 344 aa2.19□□□□□ -2.06
SEC16YPL085W RRT2P38332 387 aa2.19□□□□□ -2.06
SEC16YPL085W DBP8P38719 431 aa2.19□□□□□ -2.06
SEC16YPL085W CPR7P47103 393 aa2.19□□□□□ -2.06
SEC16YPL085W HMS2P47175 358 aa2.19□□□□□ -2.06
SEC16YPL085W SEH1P53011 349 aaKnown RBP2.19□□□□□ -2.06
SEC16YPL085W MON1P53129 644 aa2.19□□□□□ -2.06
SEC16YPL085W VPS62P53285 467 aa2.19□□□□□ -2.06
SEC16YPL085W RSM10Q03201 203 aa2.19□□□□□ -2.06
SEC16YPL085W YDR222WQ04925 415 aa2.19□□□□□ -2.06
SEC16YPL085W DUS3Q06053 668 aaKnown RBP2.19□□□□□ -2.06
SEC16YPL085W MAG2Q06436 670 aaKnown RBP2.19□□□□□ -2.06
SEC16YPL085W MDM36Q06820 579 aa2.19□□□□□ -2.06
SEC16YPL085W DIN7Q12086 430 aa2.19□□□□□ -2.06
SEC16YPL085W APM4Q99186 491 aa2.19□□□□□ -2.06
SEC16YPL085W RGS2Q99188 309 aa2.19□□□□□ -2.06
SEC16YPL085W ARG81P05085 880 aa2.19□□□□□ -2.06
SEC16YPL085W PWP1P21304 576 aaKnown RBP2.19□□□□□ -2.06
SEC16YPL085W SEC62P21825 274 aa2.19□□□□□ -2.06
SEC16YPL085W MEI4P29467 408 aa2.19□□□□□ -2.06
SEC16YPL085W MSS1P32559 526 aaPredicted RBP2.19□□□□□ -2.06
SEC16YPL085W VPS17P32913 551 aa2.19□□□□□ -2.06
SEC16YPL085W MSN4P33749 630 aa2.19□□□□□ -2.06
SEC16YPL085W NTR2P36118 322 aaPredicted RBP2.19□□□□□ -2.06
SEC16YPL085W TFA2P36145 328 aa2.19□□□□□ -2.06
SEC16YPL085W MSG5P38590 489 aa2.19□□□□□ -2.06
SEC16YPL085W LAG1P38703 411 aa2.19□□□□□ -2.06
SEC16YPL085W MPT5P39016 859 aaKnown RBP RIP-Chip data2.19□□□□□ -2.06not detected
SEC16YPL085W SSU1P41930 458 aa2.19□□□□□ -2.06
SEC16YPL085W GTO1P48239 356 aa2.19□□□□□ -2.06
SEC16YPL085W SQS1P53866 767 aaKnown RBP2.19□□□□□ -2.06
SEC16YPL085W HDA1P53973 706 aa2.19□□□□□ -2.06
SEC16YPL085W YPL034WQ03083 165 aa2.19□□□□□ -2.06
SEC16YPL085W NHX1Q04121 633 aa2.19□□□□□ -2.06
SEC16YPL085W RGA2Q06407 1009 aa2.19□□□□□ -2.06
SEC16YPL085W HDA2Q06629 674 aa2.19□□□□□ -2.06
SEC16YPL085W PFA4Q12006 378 aa2.19□□□□□ -2.06
SEC16YPL085W BAG7Q12128 409 aa2.19□□□□□ -2.06
SEC16YPL085W AI4P03878 556 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms