RNA–Protein interactions for RNA: YNL138W-A

YSF3, Transcript of Component of the SF3b subcomplex of the U2 snRNP, yeastyeast

Gene YSF3, Length 258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSF3YNL138W-A HEF3P53978 1044 aaKnown RBP3.69□□□□□ -1.82
YSF3YNL138W-A YLR455WQ06188 304 aa3.69□□□□□ -1.82
YSF3YNL138W-A ERG27Q12452 347 aaKnown RBP3.69□□□□□ -1.82
YSF3YNL138W-A MEX67Q99257 599 aaKnown RBP3.69□□□□□ -1.82
YSF3YNL138W-A VCX1Q99385 411 aa3.69□□□□□ -1.82
YSF3YNL138W-A LAA1P39526 2014 aa3.69□□□□□ -1.82
YSF3YNL138W-A CYB2P00175 591 aa3.68□□□□□ -1.82
YSF3YNL138W-A YPT1P01123 206 aaKnown RBP3.68□□□□□ -1.82
YSF3YNL138W-A CHO1P08456 276 aa3.68□□□□□ -1.82
YSF3YNL138W-A AIM17P23180 465 aaKnown RBP3.68□□□□□ -1.82
YSF3YNL138W-A TFC3P34111 1160 aa3.68□□□□□ -1.82
YSF3YNL138W-A COY1P34237 679 aa3.68□□□□□ -1.82
YSF3YNL138W-A LHS1P36016 881 aa3.68□□□□□ -1.82
YSF3YNL138W-A RIC1P40395 1056 aa3.68□□□□□ -1.82
YSF3YNL138W-A SCW4P53334 386 aaKnown RBP3.68□□□□□ -1.82
YSF3YNL138W-A EAF7P53911 425 aaKnown RBP3.68□□□□□ -1.82
YSF3YNL138W-A SEC5P89102 971 aa3.68□□□□□ -1.82
YSF3YNL138W-A PFA5Q03289 374 aa3.68□□□□□ -1.82
YSF3YNL138W-A PSK2Q08217 1101 aa3.68□□□□□ -1.82
YSF3YNL138W-A PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.68□□□□□ -1.82not detected
YSF3YNL138W-A YOR019WQ99248 730 aa3.68□□□□□ -1.82
YSF3YNL138W-A YCP4P25349 247 aaKnown RBP3.67□□□□□ -1.82
YSF3YNL138W-A ADK2P26364 225 aa3.67□□□□□ -1.82
YSF3YNL138W-A SOF1P33750 489 aaKnown RBP3.67□□□□□ -1.82
YSF3YNL138W-A ASK1P35734 292 aa3.67□□□□□ -1.82
YSF3YNL138W-A AAP1P37898 856 aaKnown RBP3.67□□□□□ -1.82
YSF3YNL138W-A GND1P38720 489 aaKnown RBP3.67□□□□□ -1.82
YSF3YNL138W-A SEC31P38968 1273 aaKnown RBP3.67□□□□□ -1.82
YSF3YNL138W-A MRX1P40050 688 aa3.67□□□□□ -1.82
YSF3YNL138W-A YIR016WP40572 265 aa3.67□□□□□ -1.82
YSF3YNL138W-A SAD1P43589 448 aa3.67□□□□□ -1.82
YSF3YNL138W-A MPS1P54199 764 aa3.67□□□□□ -1.82
YSF3YNL138W-A RSM28Q03430 361 aa3.67□□□□□ -1.82
YSF3YNL138W-A GYL1Q04322 720 aa3.67□□□□□ -1.82
YSF3YNL138W-A SNO4Q04902 237 aa3.67□□□□□ -1.82
YSF3YNL138W-A HSP33Q08914 237 aaKnown RBP3.67□□□□□ -1.82
YSF3YNL138W-A HSP32Q08992 237 aa3.67□□□□□ -1.82
YSF3YNL138W-A YLR049CQ12110 428 aa3.67□□□□□ -1.82
YSF3YNL138W-A DRE2P36152 348 aa3.66□□□□□ -1.82
YSF3YNL138W-A ECM10P39987 644 aa3.66□□□□□ -1.82
YSF3YNL138W-A YER010CP40011 234 aa3.66□□□□□ -1.82
YSF3YNL138W-A MAF1P41910 395 aa3.66□□□□□ -1.82
YSF3YNL138W-A VTC3Q02725 835 aa3.66□□□□□ -1.82
YSF3YNL138W-A MRPL1Q04599 285 aa3.66□□□□□ -1.82
YSF3YNL138W-A ATX2Q12067 313 aa3.66□□□□□ -1.82
YSF3YNL138W-A YLR112WQ12130 139 aa3.66□□□□□ -1.82
YSF3YNL138W-A RPL42AP0CX27 106 aaKnown RBP3.65□□□□□ -1.83
YSF3YNL138W-A RPL42BP0CX28 106 aaKnown RBP3.65□□□□□ -1.83
YSF3YNL138W-A STE50P25344 346 aa3.65□□□□□ -1.83
YSF3YNL138W-A MRP20P32387 263 aa3.65□□□□□ -1.83
YSF3YNL138W-A RRN3P36070 627 aa3.65□□□□□ -1.83
YSF3YNL138W-A SPC97P38863 823 aa3.65□□□□□ -1.83
YSF3YNL138W-A KAP123P40069 1113 aaKnown RBP3.65□□□□□ -1.83
YSF3YNL138W-A IME4P41833 600 aa3.65□□□□□ -1.83
YSF3YNL138W-A YFR020WP43600 232 aa3.65□□□□□ -1.83
YSF3YNL138W-A MDV1P47025 714 aa3.65□□□□□ -1.83
YSF3YNL138W-A LYS20P48570 428 aaKnown RBP3.65□□□□□ -1.83
YSF3YNL138W-A UBP8P50102 471 aa3.65□□□□□ -1.83
YSF3YNL138W-A GPN2Q08726 347 aaPredicted RBP3.65□□□□□ -1.83
YSF3YNL138W-A CIR2Q08822 631 aa3.65□□□□□ -1.83
YSF3YNL138W-A NEW1Q08972 1196 aaKnown RBP3.65□□□□□ -1.83
YSF3YNL138W-A NUS1Q12063 375 aa3.65□□□□□ -1.83
YSF3YNL138W-A YOL087CQ99247 1116 aa3.65□□□□□ -1.83
YSF3YNL138W-A RPS14AP06367 137 aaKnown RBP3.64□□□□□ -1.83
YSF3YNL138W-A RPB2P08518 1224 aaKnown RBP3.64□□□□□ -1.83
YSF3YNL138W-A SGF29P25554 259 aa3.64□□□□□ -1.83
YSF3YNL138W-A GCS1P35197 352 aa3.64□□□□□ -1.83
YSF3YNL138W-A RPS14BP39516 138 aaKnown RBP3.64□□□□□ -1.83
YSF3YNL138W-A SEC24P40482 926 aaKnown RBP3.64□□□□□ -1.83
YSF3YNL138W-A CTK2P46962 323 aa3.64□□□□□ -1.83
YSF3YNL138W-A VPS25P47142 202 aa3.64□□□□□ -1.83
YSF3YNL138W-A ASI1P54074 624 aa3.64□□□□□ -1.83
YSF3YNL138W-A SWF1Q04629 336 aa3.64□□□□□ -1.83
YSF3YNL138W-A NSE1Q07913 336 aa3.64□□□□□ -1.83
YSF3YNL138W-A GSH2Q08220 491 aa3.64□□□□□ -1.83
YSF3YNL138W-A YOL159CQ08300 171 aa3.64□□□□□ -1.83
YSF3YNL138W-A ALY1P36117 915 aa3.63□□□□□ -1.83
YSF3YNL138W-A KTR3P38130 404 aaPredicted RBP3.63□□□□□ -1.83
YSF3YNL138W-A NDT80P38830 627 aa3.63□□□□□ -1.83
YSF3YNL138W-A VID27P40157 782 aa3.63□□□□□ -1.83
YSF3YNL138W-A MMF1P40185 145 aaKnown RBP3.63□□□□□ -1.83
YSF3YNL138W-A CBK1P53894 756 aa3.63□□□□□ -1.83
YSF3YNL138W-A YPL068CQ02749 293 aa3.63□□□□□ -1.83
YSF3YNL138W-A RCO1Q04779 684 aa3.63□□□□□ -1.83
YSF3YNL138W-A SUE1Q06524 206 aa3.63□□□□□ -1.83
YSF3YNL138W-A POS5Q06892 414 aa3.63□□□□□ -1.83
YSF3YNL138W-A YBR085C-AO43137 85 aa3.62□□□□□ -1.83
YSF3YNL138W-A RAP1P11938 827 aa3.62□□□□□ -1.83
YSF3YNL138W-A CDC15P27636 974 aa3.62□□□□□ -1.83
YSF3YNL138W-A CBF2P32504 956 aa3.62□□□□□ -1.83
YSF3YNL138W-A DPH1P40487 425 aaKnown RBP3.62□□□□□ -1.83
YSF3YNL138W-A IRC8P47046 822 aa3.62□□□□□ -1.83
YSF3YNL138W-A PIL1P53252 339 aaKnown RBP3.62□□□□□ -1.83
YSF3YNL138W-A YTP1P53584 459 aa3.62□□□□□ -1.83
YSF3YNL138W-A IZH1Q03419 316 aa3.62□□□□□ -1.83
YSF3YNL138W-A CAC2Q04199 468 aa3.62□□□□□ -1.83
YSF3YNL138W-A SNA4Q07549 140 aa3.62□□□□□ -1.83
YSF3YNL138W-A UBX3Q12229 455 aa3.62□□□□□ -1.83
YSF3YNL138W-A RER1P25560 188 aa3.61□□□□□ -1.83
YSF3YNL138W-A DPB3P27344 201 aa3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms