RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C SGS1P35187 1447 aa4.52□□□□□ -1.69
VPS71YML041C TUB1P09733 447 aaKnown RBP4.51□□□□□ -1.69
VPS71YML041C PRP2P20095 876 aaPredicted RBP4.51□□□□□ -1.69
VPS71YML041C MGM1P32266 881 aa4.51□□□□□ -1.69
VPS71YML041C HXT3P32466 567 aaKnown RBP4.51□□□□□ -1.69
VPS71YML041C TFB1P32776 642 aa4.51□□□□□ -1.69
VPS71YML041C MSR1P38714 643 aa4.51□□□□□ -1.69
VPS71YML041C ANS1P38832 159 aa4.51□□□□□ -1.69
VPS71YML041C ZIM17P42844 174 aa4.51□□□□□ -1.69
VPS71YML041C IRC7P43623 340 aa4.51□□□□□ -1.69
VPS71YML041C OCA1P50946 238 aaPredicted RBP4.51□□□□□ -1.69
VPS71YML041C MNP1P53163 194 aaPredicted RBP4.51□□□□□ -1.69
VPS71YML041C DRN1P53255 507 aaKnown RBP4.51□□□□□ -1.69
VPS71YML041C EOS1P53938 366 aa4.51□□□□□ -1.69
VPS71YML041C SLG1P54867 378 aa4.51□□□□□ -1.69
VPS71YML041C KAP120Q02932 1032 aa4.51□□□□□ -1.69
VPS71YML041C SOV1Q04748 898 aa4.51□□□□□ -1.69
VPS71YML041C ATG26Q06321 1198 aa4.51□□□□□ -1.69
VPS71YML041C TPO3Q06451 622 aa4.51□□□□□ -1.69
VPS71YML041C YLR049CQ12110 428 aa4.51□□□□□ -1.69
VPS71YML041C AFI1Q99222 893 aa4.51□□□□□ -1.69
VPS71YML041C BNR1P40450 1375 aa4.51□□□□□ -1.69
VPS71YML041C GAL4P04386 881 aa4.5□□□□□ -1.69
VPS71YML041C PEP4P07267 405 aaKnown RBP4.5□□□□□ -1.69
VPS71YML041C VMA2P16140 517 aaKnown RBP4.5□□□□□ -1.69
VPS71YML041C NUP1P20676 1076 aa4.5□□□□□ -1.69
VPS71YML041C NIP100P33420 868 aa4.5□□□□□ -1.69
VPS71YML041C HCS1P34243 683 aa4.5□□□□□ -1.69
VPS71YML041C RPL32P38061 130 aaKnown RBP4.5□□□□□ -1.69
VPS71YML041C RIX1P38883 763 aaPredicted RBP4.5□□□□□ -1.69
VPS71YML041C CIN4P39110 191 aa4.5□□□□□ -1.69
VPS71YML041C LCB2P40970 561 aa4.5□□□□□ -1.69
VPS71YML041C NMD5P46970 1048 aa4.5□□□□□ -1.69
VPS71YML041C AIM22P47051 409 aa4.5□□□□□ -1.69
VPS71YML041C CAC2Q04199 468 aa4.5□□□□□ -1.69
VPS71YML041C GYL1Q04322 720 aa4.5□□□□□ -1.69
VPS71YML041C SWF1Q04629 336 aa4.5□□□□□ -1.69
VPS71YML041C ROY1Q04847 553 aa4.5□□□□□ -1.69
VPS71YML041C SKS1Q12505 502 aa4.5□□□□□ -1.69
VPS71YML041C CYB2P00175 591 aa4.49□□□□□ -1.69
VPS71YML041C CBP1P07252 654 aa4.49□□□□□ -1.69
VPS71YML041C MSS51P32335 436 aa4.49□□□□□ -1.69
VPS71YML041C DPH2P32461 534 aa4.49□□□□□ -1.69
VPS71YML041C RML2P32611 393 aa4.49□□□□□ -1.69
VPS71YML041C ICS2P38284 255 aa4.49□□□□□ -1.69
VPS71YML041C DBP8P38719 431 aa4.49□□□□□ -1.69
VPS71YML041C PHO90P39535 881 aa4.49□□□□□ -1.69
VPS71YML041C YMR147WP40218 223 aaKnown RBP4.49□□□□□ -1.69
VPS71YML041C ULP2P40537 1034 aaPredicted RBP4.49□□□□□ -1.69
VPS71YML041C CAK1P43568 368 aaPredicted RBP4.49□□□□□ -1.69
VPS71YML041C PTR3P43606 678 aa4.49□□□□□ -1.69
VPS71YML041C TCB2P48231 1178 aa4.49□□□□□ -1.69
VPS71YML041C RSM23Q01163 450 aa4.49□□□□□ -1.69
VPS71YML041C YMR160WQ03823 816 aa4.49□□□□□ -1.69
VPS71YML041C YDR286CQ05530 114 aa4.49□□□□□ -1.69
VPS71YML041C DON1Q05610 365 aa4.49□□□□□ -1.69
VPS71YML041C YOR365CQ08844 703 aa4.49□□□□□ -1.69
VPS71YML041C YML133CQ03099 1374 aa4.49□□□□□ -1.69
VPS71YML041C YLL067CQ07888 1374 aa4.49□□□□□ -1.69
VPS71YML041C YLL066CQ99208 1374 aa4.49□□□□□ -1.69
VPS71YML041C YPT1P01123 206 aaKnown RBP4.48□□□□□ -1.69
VPS71YML041C ARG81P05085 880 aa4.48□□□□□ -1.69
VPS71YML041C RPL31BP0C2H9 113 aaKnown RBP4.48□□□□□ -1.69
VPS71YML041C CNA1P23287 553 aa4.48□□□□□ -1.69
VPS71YML041C ERV1P27882 189 aa4.48□□□□□ -1.69
VPS71YML041C IDH2P28241 369 aaKnown RBP4.48□□□□□ -1.69
VPS71YML041C YME1P32795 747 aa4.48□□□□□ -1.69
VPS71YML041C LTV1P34078 463 aa4.48□□□□□ -1.69
VPS71YML041C GDT1P38301 280 aaPredicted RBP4.48□□□□□ -1.69
VPS71YML041C FMP45Q07651 309 aa4.48□□□□□ -1.69
VPS71YML041C PFA4Q12006 378 aa4.48□□□□□ -1.69
VPS71YML041C SPE3Q12074 293 aaKnown RBP4.48□□□□□ -1.69
VPS71YML041C RRD2Q12461 358 aa4.48□□□□□ -1.69
VPS71YML041C CTF3Q12748 733 aa4.48□□□□□ -1.69
VPS71YML041C PPZ2P33329 710 aa4.47□□□□□ -1.69
VPS71YML041C KEL1P38853 1164 aaKnown RBP4.47□□□□□ -1.69
VPS71YML041C POP2P39008 433 aa4.47□□□□□ -1.69
VPS71YML041C YIL060WP40519 144 aa4.47□□□□□ -1.69
VPS71YML041C URB2P47108 1174 aa4.47□□□□□ -1.69
VPS71YML041C CUL3P53202 744 aa4.47□□□□□ -1.69
VPS71YML041C ATP23P53722 227 aa4.47□□□□□ -1.69
VPS71YML041C IDP3P53982 420 aaKnown RBP4.47□□□□□ -1.69
VPS71YML041C TOF2Q02208 771 aa4.47□□□□□ -1.69
VPS71YML041C RSC9Q03124 581 aa4.47□□□□□ -1.69
VPS71YML041C HOT1Q03213 719 aa4.47□□□□□ -1.69
VPS71YML041C PDS5Q04264 1277 aa4.47□□□□□ -1.69
VPS71YML041C CDC45Q08032 650 aa4.47□□□□□ -1.69
VPS71YML041C STF1P01098 86 aa4.46□□□□□ -1.7
VPS71YML041C RPL3P14126 387 aaKnown RBP4.46□□□□□ -1.7
VPS71YML041C SGV1P23293 657 aaKnown RBP4.46□□□□□ -1.7
VPS71YML041C GEX1P25596 615 aa4.46□□□□□ -1.7
VPS71YML041C BRF1P29056 596 aa4.46□□□□□ -1.7
VPS71YML041C PIM1P36775 1133 aa4.46□□□□□ -1.7
VPS71YML041C NTC20P38302 140 aaPredicted RBP4.46□□□□□ -1.7
VPS71YML041C YHR054CP38780 354 aa4.46□□□□□ -1.7
VPS71YML041C YHR210CP38893 341 aa4.46□□□□□ -1.7
VPS71YML041C ATG27P46989 271 aa4.46□□□□□ -1.7
VPS71YML041C NET1P47035 1189 aa4.46□□□□□ -1.7
VPS71YML041C MPP10P47083 593 aaKnown RBP4.46□□□□□ -1.7
VPS71YML041C UBP8P50102 471 aa4.46□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 44.6 ms