RNA–Protein interactions for RNA: YLR208W

SEC13, Transcript of Structural component of 3 distinct complexes, yeast

Gene SEC13, Length 894 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC13	YLR208W	PCA1	P38360	1216 aa		5.44	□□□□□ -1.54
SEC13	YLR208W	PEX18	P38855	283 aa		5.44	□□□□□ -1.54
SEC13	YLR208W	YIL165C	P40446	119 aa		5.44	□□□□□ -1.54
SEC13	YLR208W	STU2	P46675	888 aa		5.44	□□□□□ -1.54
SEC13	YLR208W	AIP1	P46680	615 aa	Known RBP	5.44	□□□□□ -1.54
SEC13	YLR208W	BSC5	P53755	489 aa		5.44	□□□□□ -1.54
SEC13	YLR208W	ATG10	Q07879	167 aa		5.44	□□□□□ -1.54
SEC13	YLR208W	SEC39	Q12745	709 aa		5.44	□□□□□ -1.54
SEC13	YLR208W	JIP3	O13555	125 aa		5.43	□□□□□ -1.54
SEC13	YLR208W	PHO5	P00635	467 aa		5.43	□□□□□ -1.54
SEC13	YLR208W	SEC53	P07283	254 aa	Known RBP	5.43	□□□□□ -1.54
SEC13	YLR208W	PET111	P08468	800 aa		5.43	□□□□□ -1.54
SEC13	YLR208W	CLB4	P24871	460 aa		5.43	□□□□□ -1.54
SEC13	YLR208W	RRP43	P25359	394 aa	Predicted RBP	5.43	□□□□□ -1.54
SEC13	YLR208W	RDS1	P25611	832 aa		5.43	□□□□□ -1.54
SEC13	YLR208W	MRP4	P32902	394 aa		5.43	□□□□□ -1.54
SEC13	YLR208W	CSG2	P35206	410 aa		5.43	□□□□□ -1.54
SEC13	YLR208W	TEF4	P36008	412 aa	Known RBP	5.43	□□□□□ -1.54
SEC13	YLR208W	EXO5	P38289	585 aa		5.43	□□□□□ -1.54
SEC13	YLR208W	ATF1	P40353	525 aa		5.43	□□□□□ -1.54
SEC13	YLR208W	CFD1	P40558	293 aa		5.43	□□□□□ -1.54
SEC13	YLR208W	UBX6	P47049	396 aa		5.43	□□□□□ -1.54
SEC13	YLR208W	SGF73	P53165	657 aa		5.43	□□□□□ -1.54
SEC13	YLR208W	DRN1	P53255	507 aa	Known RBP	5.43	□□□□□ -1.54
SEC13	YLR208W	COP1	P53622	1201 aa	Known RBP	5.43	□□□□□ -1.54
SEC13	YLR208W	HAS1	Q03532	505 aa	Known RBP	5.43	□□□□□ -1.54
SEC13	YLR208W	VHS1	Q03785	461 aa		5.43	□□□□□ -1.54
SEC13	YLR208W	SNO4	Q04902	237 aa		5.43	□□□□□ -1.54
SEC13	YLR208W	RSF1	Q05043	376 aa		5.43	□□□□□ -1.54
SEC13	YLR208W	MCP2	Q06567	569 aa		5.43	□□□□□ -1.54
SEC13	YLR208W	SYT1	Q06836	1226 aa		5.43	□□□□□ -1.54
SEC13	YLR208W	HSP33	Q08914	237 aa	Known RBP	5.43	□□□□□ -1.54
SEC13	YLR208W	HSP32	Q08992	237 aa		5.43	□□□□□ -1.54
SEC13	YLR208W	TGL5	Q12043	749 aa		5.43	□□□□□ -1.54
SEC13	YLR208W	RTC5	Q12108	567 aa	Known RBP	5.43	□□□□□ -1.54
SEC13	YLR208W	HUA2	Q12134	243 aa		5.43	□□□□□ -1.54
SEC13	YLR208W	HAL9	Q12180	1030 aa		5.43	□□□□□ -1.54
SEC13	YLR208W	MDY2	Q12285	212 aa		5.43	□□□□□ -1.54
SEC13	YLR208W	RPS21B	Q3E754	87 aa	Known RBP	5.43	□□□□□ -1.54
SEC13	YLR208W	PWP1	P21304	576 aa	Known RBP	5.42	□□□□□ -1.54
SEC13	YLR208W	OCA4	P25366	362 aa		5.42	□□□□□ -1.54
SEC13	YLR208W	SEC65	P29478	273 aa		5.42	□□□□□ -1.54
SEC13	YLR208W	PRX1	P34227	261 aa	Known RBP	5.42	□□□□□ -1.54
SEC13	YLR208W	GND1	P38720	489 aa	Known RBP	5.42	□□□□□ -1.54
SEC13	YLR208W	PRM2	P40534	656 aa		5.42	□□□□□ -1.54
SEC13	YLR208W	SNG1	P46950	547 aa		5.42	□□□□□ -1.54
SEC13	YLR208W	MRX6	P48564	524 aa		5.42	□□□□□ -1.54
SEC13	YLR208W	SKP1	P52286	194 aa		5.42	□□□□□ -1.54
SEC13	YLR208W	VPS75	P53853	264 aa		5.42	□□□□□ -1.54
SEC13	YLR208W	RKM2	Q03942	479 aa		5.42	□□□□□ -1.54
SEC13	YLR208W	CWC2	Q12046	339 aa	Predicted RBP	5.42	□□□□□ -1.54
SEC13	YLR208W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	5.42	□□□□□ -1.54	not detected
SEC13	YLR208W	EMP46	Q12396	444 aa		5.42	□□□□□ -1.54
SEC13	YLR208W	PPR1	P07272	904 aa	Predicted RBP	5.41	□□□□□ -1.54
SEC13	YLR208W	POL30	P15873	258 aa	Known RBP	5.41	□□□□□ -1.54
SEC13	YLR208W	ATP12	P22135	325 aa		5.41	□□□□□ -1.54
SEC13	YLR208W	IFA38	P38286	347 aa		5.41	□□□□□ -1.54
SEC13	YLR208W	YER034W	P40022	185 aa	Known RBP	5.41	□□□□□ -1.54
SEC13	YLR208W	SCS2	P40075	244 aa	Known RBP	5.41	□□□□□ -1.54
SEC13	YLR208W	GLG2	P47011	380 aa		5.41	□□□□□ -1.54
SEC13	YLR208W	NOP9	P47077	666 aa	Known RBP	5.41	□□□□□ -1.54
SEC13	YLR208W	RPN14	P53196	417 aa		5.41	□□□□□ -1.54
SEC13	YLR208W	SNF12	P53628	566 aa		5.41	□□□□□ -1.54
SEC13	YLR208W	KTR6	P54070	446 aa		5.41	□□□□□ -1.54
SEC13	YLR208W	YAP6	Q03935	383 aa		5.41	□□□□□ -1.54
SEC13	YLR208W	CDA2	Q06703	312 aa		5.41	□□□□□ -1.54
SEC13	YLR208W	ENV7	Q12003	364 aa		5.41	□□□□□ -1.54
SEC13	YLR208W	PEX11	Q12462	236 aa		5.41	□□□□□ -1.54
SEC13	YLR208W	MDH1	P17505	334 aa	Known RBP RIP-Chip data	5.4	□□□□□ -1.54	not detected
SEC13	YLR208W	PPH21	P23594	369 aa		5.4	□□□□□ -1.54
SEC13	YLR208W	RPL5	P26321	297 aa	Known RBP	5.4	□□□□□ -1.54
SEC13	YLR208W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.4	□□□□□ -1.54	not detected
SEC13	YLR208W	YEL043W	P32618	956 aa		5.4	□□□□□ -1.54
SEC13	YLR208W	SUR1	P33300	382 aa		5.4	□□□□□ -1.54
SEC13	YLR208W	FAT1	P38225	669 aa		5.4	□□□□□ -1.54
SEC13	YLR208W	ATG14	P38270	344 aa		5.4	□□□□□ -1.54
SEC13	YLR208W	CBR1	P38626	284 aa	Known RBP	5.4	□□□□□ -1.54
SEC13	YLR208W	SRP68	P38687	599 aa	Known RBP	5.4	□□□□□ -1.54
SEC13	YLR208W	SWD1	P39706	426 aa		5.4	□□□□□ -1.54
SEC13	YLR208W	SSP120	P39931	234 aa	Known RBP	5.4	□□□□□ -1.54
SEC13	YLR208W	SSU1	P41930	458 aa		5.4	□□□□□ -1.54
SEC13	YLR208W	SPG5	P42933	373 aa		5.4	□□□□□ -1.54
SEC13	YLR208W	CTK3	P46963	296 aa	Predicted RBP	5.4	□□□□□ -1.54
SEC13	YLR208W	BPL1	P48445	690 aa	Predicted RBP	5.4	□□□□□ -1.54
SEC13	YLR208W	RAD17	P48581	401 aa		5.4	□□□□□ -1.54
SEC13	YLR208W	PUS2	P53167	370 aa		5.4	□□□□□ -1.54
SEC13	YLR208W	DUO1	P53168	247 aa	Known RBP	5.4	□□□□□ -1.54
SEC13	YLR208W	YNR068C	P53754	272 aa		5.4	□□□□□ -1.54
SEC13	YLR208W	YNL040W	P53960	456 aa	Predicted RBP	5.4	□□□□□ -1.54
SEC13	YLR208W	ORC3	P54790	616 aa		5.4	□□□□□ -1.54
SEC13	YLR208W	ERB1	Q04660	807 aa	Known RBP	5.4	□□□□□ -1.54
SEC13	YLR208W	STP3	Q05937	343 aa		5.4	□□□□□ -1.54
SEC13	YLR208W	MCH5	Q08777	521 aa		5.4	□□□□□ -1.54
SEC13	YLR208W	GLE1	Q12315	538 aa		5.4	□□□□□ -1.54
SEC13	YLR208W	YML002W	P0CF17	737 aa		5.39	□□□□□ -1.55
SEC13	YLR208W	ADH4	P10127	382 aa		5.39	□□□□□ -1.55
SEC13	YLR208W	MET16	P18408	261 aa	Predicted RBP	5.39	□□□□□ -1.55
SEC13	YLR208W	CLB1	P24868	471 aa		5.39	□□□□□ -1.55
SEC13	YLR208W	CDC12	P32468	407 aa	Known RBP	5.39	□□□□□ -1.55
SEC13	YLR208W	KAR9	P32526	644 aa		5.39	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms