RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C FMP40Q08968 688 aaPredicted RBP3.37□□□□□ -1.87
YPT52YKR014C YBR126W-AQ8TGU7 68 aa3.37□□□□□ -1.87
YPT52YKR014C YCK1P23291 538 aa3.36□□□□□ -1.87
YPT52YKR014C CPR3P25719 182 aa3.36□□□□□ -1.87
YPT52YKR014C NDC1P32500 655 aa3.36□□□□□ -1.87
YPT52YKR014C UBP11P36026 717 aa3.36□□□□□ -1.87
YPT52YKR014C NUP133P36161 1157 aa3.36□□□□□ -1.87
YPT52YKR014C CIN4P39110 191 aa3.36□□□□□ -1.87
YPT52YKR014C RTT101P47050 842 aa3.36□□□□□ -1.87
YPT52YKR014C ALT2P52892 507 aa3.36□□□□□ -1.87
YPT52YKR014C NOP58Q12499 511 aaKnown RBP3.36□□□□□ -1.87
YPT52YKR014C RPL19AP0CX82 189 aaKnown RBP3.35□□□□□ -1.87
YPT52YKR014C RPL19BP0CX83 189 aaPredicted RBP3.35□□□□□ -1.87
YPT52YKR014C MRS3P10566 314 aa3.35□□□□□ -1.87
YPT52YKR014C SGF29P25554 259 aa3.35□□□□□ -1.87
YPT52YKR014C YEL068CP39977 110 aa3.35□□□□□ -1.87
YPT52YKR014C MEP3P53390 489 aa3.35□□□□□ -1.87
YPT52YKR014C RPM2Q02773 1202 aa3.35□□□□□ -1.87
YPT52YKR014C HCR1Q05775 265 aaKnown RBP3.35□□□□□ -1.87
YPT52YKR014C SET6Q12529 373 aa3.35□□□□□ -1.87
YPT52YKR014C CDC16P09798 840 aa3.34□□□□□ -1.87
YPT52YKR014C APE1P14904 514 aa3.34□□□□□ -1.87
YPT52YKR014C KGD1P20967 1014 aaKnown RBP3.34□□□□□ -1.87
YPT52YKR014C RPS2P25443 254 aaKnown RBP3.34□□□□□ -1.87
YPT52YKR014C POL4P25615 582 aa3.34□□□□□ -1.87
YPT52YKR014C MCM10P32354 571 aa3.34□□□□□ -1.87
YPT52YKR014C SIP2P34164 415 aaKnown RBP3.34□□□□□ -1.87
YPT52YKR014C NPR2P39923 615 aa3.34□□□□□ -1.87
YPT52YKR014C RPH1P39956 796 aa3.34□□□□□ -1.87
YPT52YKR014C YJL132WP47014 750 aa3.34□□□□□ -1.87
YPT52YKR014C ERP1Q05359 219 aaKnown RBP3.34□□□□□ -1.87
YPT52YKR014C YDL057WQ07379 328 aa3.34□□□□□ -1.87
YPT52YKR014C RTT109Q07794 436 aa3.34□□□□□ -1.87
YPT52YKR014C RPL15AP05748 204 aaKnown RBP3.33□□□□□ -1.88
YPT52YKR014C GDH1P07262 454 aaKnown RBP3.33□□□□□ -1.88
YPT52YKR014C SEC53P07283 254 aaKnown RBP3.33□□□□□ -1.88
YPT52YKR014C SYN8P31377 255 aa3.33□□□□□ -1.88
YPT52YKR014C OSH3P38713 996 aaKnown RBP3.33□□□□□ -1.88
YPT52YKR014C YJL213WP40896 331 aa3.33□□□□□ -1.88
YPT52YKR014C YDL186WP48568 277 aa3.33□□□□□ -1.88
YPT52YKR014C APT1P49435 187 aaKnown RBP3.33□□□□□ -1.88
YPT52YKR014C VID30P53076 958 aa3.33□□□□□ -1.88
YPT52YKR014C DSD1P53095 428 aa3.33□□□□□ -1.88
YPT52YKR014C ENT1Q12518 454 aa3.33□□□□□ -1.88
YPT52YKR014C ART10P18634 518 aaKnown RBP3.32□□□□□ -1.88
YPT52YKR014C EXO70P19658 623 aa3.32□□□□□ -1.88
YPT52YKR014C SAC6P32599 642 aaKnown RBP3.32□□□□□ -1.88
YPT52YKR014C SEF1P34228 1148 aa3.32□□□□□ -1.88
YPT52YKR014C ALG5P40350 334 aa3.32□□□□□ -1.88
YPT52YKR014C YFR016CP43597 1233 aaKnown RBP3.32□□□□□ -1.88
YPT52YKR014C YJR154WP47181 346 aa3.32□□□□□ -1.88
YPT52YKR014C DUO1P53168 247 aaKnown RBP3.32□□□□□ -1.88
YPT52YKR014C YPL272CQ08984 517 aa3.32□□□□□ -1.88
YPT52YKR014C KAR3P17119 729 aa3.31□□□□□ -1.88
YPT52YKR014C EST1P17214 699 aaPredicted RBP3.31□□□□□ -1.88
YPT52YKR014C PAP1P29468 568 aaKnown RBP3.31□□□□□ -1.88
YPT52YKR014C SPC110P32380 944 aa3.31□□□□□ -1.88
YPT52YKR014C NOP4P37838 685 aaKnown RBP3.31□□□□□ -1.88
YPT52YKR014C YBR139WP38109 508 aa3.31□□□□□ -1.88
YPT52YKR014C YHR210CP38893 341 aa3.31□□□□□ -1.88
YPT52YKR014C YHR218WP38899 603 aa3.31□□□□□ -1.88
YPT52YKR014C KRE9P39005 276 aa3.31□□□□□ -1.88
YPT52YKR014C ALK1P43633 760 aaKnown RBP3.31□□□□□ -1.88
YPT52YKR014C LCL3P53153 274 aa3.31□□□□□ -1.88
YPT52YKR014C RBG2P53295 368 aaKnown RBP3.31□□□□□ -1.88
YPT52YKR014C BUD32P53323 261 aa3.31□□□□□ -1.88
YPT52YKR014C IPI3P53877 555 aa3.31□□□□□ -1.88
YPT52YKR014C YMR087WQ04299 284 aa3.31□□□□□ -1.88
YPT52YKR014C MRPL51Q06090 140 aaPredicted RBP3.31□□□□□ -1.88
YPT52YKR014C VPS74Q06385 345 aa3.31□□□□□ -1.88
YPT52YKR014C YDL009CQ12210 107 aa3.31□□□□□ -1.88
YPT52YKR014C SPE4Q12455 300 aa3.31□□□□□ -1.88
YPT52YKR014C RPL20AP0CX23 172 aaKnown RBP3.3□□□□□ -1.88
YPT52YKR014C RPL20BP0CX24 172 aaPredicted RBP3.3□□□□□ -1.88
YPT52YKR014C CBS2P14905 389 aa3.3□□□□□ -1.88
YPT52YKR014C MCK1P21965 375 aaKnown RBP3.3□□□□□ -1.88
YPT52YKR014C SHP1P34223 423 aa3.3□□□□□ -1.88
YPT52YKR014C MUD2P36084 527 aaKnown RBP3.3□□□□□ -1.88
YPT52YKR014C MTC4P38335 694 aaKnown RBP3.3□□□□□ -1.88
YPT52YKR014C FLC2P39719 783 aa3.3□□□□□ -1.88
YPT52YKR014C VPS52P39904 641 aa3.3□□□□□ -1.88
YPT52YKR014C RPR2P40571 144 aa3.3□□□□□ -1.88
YPT52YKR014C TOF2Q02208 771 aa3.3□□□□□ -1.88
YPT52YKR014C MSC1Q03104 513 aa3.3□□□□□ -1.88
YPT52YKR014C IVY1Q04934 453 aa3.3□□□□□ -1.88
YPT52YKR014C SYO1Q07395 620 aa3.3□□□□□ -1.88
YPT52YKR014C YEH1Q07804 573 aa3.3□□□□□ -1.88
YPT52YKR014C NMD4Q12129 218 aa3.3□□□□□ -1.88
YPT52YKR014C LSP1Q12230 341 aaKnown RBP3.3□□□□□ -1.88
YPT52YKR014C BRR1Q99177 341 aaPredicted RBP3.3□□□□□ -1.88
YPT52YKR014C HSH49Q99181 213 aaPredicted RBP3.3□□□□□ -1.88
YPT52YKR014C SGS1P35187 1447 aa3.29□□□□□ -1.88
YPT52YKR014C YCR007CP25354 239 aa3.29□□□□□ -1.88
YPT52YKR014C SHO1P40073 367 aa3.29□□□□□ -1.88
YPT52YKR014C TMA108P40462 946 aa3.29□□□□□ -1.88
YPT52YKR014C ELP2P42935 788 aa3.29□□□□□ -1.88
YPT52YKR014C SCD6P45978 349 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88 RIP-Chip
YPT52YKR014C COS10P52924 374 aa3.29□□□□□ -1.88
YPT52YKR014C SUB1P54000 292 aaKnown RBP3.29□□□□□ -1.88
YPT52YKR014C IRC15Q02733 499 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 55.7 ms