RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C MRE11P32829 692 aa2.34□□□□□ -2.03
SHE2YKL130C YBR144CP34215 104 aa2.34□□□□□ -2.03
SHE2YKL130C SNU114P36048 1008 aaKnown RBP2.34□□□□□ -2.03
SHE2YKL130C CMC1P36064 111 aa2.34□□□□□ -2.03
SHE2YKL130C ADE17P38009 592 aaKnown RBP2.34□□□□□ -2.03
SHE2YKL130C ALG5P40350 334 aa2.34□□□□□ -2.03
SHE2YKL130C JEM1P40358 645 aa2.34□□□□□ -2.03
SHE2YKL130C TWF1P53250 332 aa2.34□□□□□ -2.03
SHE2YKL130C CIK1Q01649 594 aa2.34□□□□□ -2.03
SHE2YKL130C MAK10Q02197 733 aa2.34□□□□□ -2.03
SHE2YKL130C IZH1Q03419 316 aa2.34□□□□□ -2.03
SHE2YKL130C RQC1Q05468 723 aaKnown RBP2.34□□□□□ -2.03
SHE2YKL130C PDR8Q06149 701 aa2.34□□□□□ -2.03
SHE2YKL130C YLR112WQ12130 139 aa2.34□□□□□ -2.03
SHE2YKL130C LEU9Q12166 604 aaKnown RBP2.34□□□□□ -2.03
SHE2YKL130C PAP1P29468 568 aaKnown RBP2.33□□□□□ -2.04
SHE2YKL130C WBP1P33767 430 aaKnown RBP2.33□□□□□ -2.04
SHE2YKL130C SAS3P34218 831 aa2.33□□□□□ -2.04
SHE2YKL130C TCD2P36101 447 aaKnown RBP2.33□□□□□ -2.04
SHE2YKL130C MNN2P38069 597 aa2.33□□□□□ -2.04
SHE2YKL130C RFC1P38630 861 aaKnown RBP2.33□□□□□ -2.04
SHE2YKL130C APE4P38821 490 aa2.33□□□□□ -2.04
SHE2YKL130C ELO1P39540 310 aa2.33□□□□□ -2.04
SHE2YKL130C PCL6P40038 420 aa2.33□□□□□ -2.04
SHE2YKL130C SGN1P40561 250 aaKnown RBP RIP-Chip data2.33□□□□□ -2.04not detected
SHE2YKL130C PTR3P43606 678 aa2.33□□□□□ -2.04
SHE2YKL130C PET130P47065 347 aa2.33□□□□□ -2.04
SHE2YKL130C DPB4Q04603 196 aaKnown RBP2.33□□□□□ -2.04
SHE2YKL130C MRD1Q06106 887 aaKnown RBP2.33□□□□□ -2.04
SHE2YKL130C VTA1Q06263 330 aa2.33□□□□□ -2.04
SHE2YKL130C APL4Q12028 832 aa2.33□□□□□ -2.04
SHE2YKL130C ATG9Q12142 997 aa2.33□□□□□ -2.04
SHE2YKL130C SEC39Q12745 709 aa2.33□□□□□ -2.04
SHE2YKL130C YOL159C-AQ3E769 90 aa2.33□□□□□ -2.04
SHE2YKL130C PET111P08468 800 aa2.32□□□□□ -2.04
SHE2YKL130C ART10P18634 518 aaKnown RBP2.32□□□□□ -2.04
SHE2YKL130C STE50P25344 346 aa2.32□□□□□ -2.04
SHE2YKL130C PRD1P25375 712 aa2.32□□□□□ -2.04
SHE2YKL130C PUP3P25451 205 aaKnown RBP2.32□□□□□ -2.04
SHE2YKL130C IMG1P25626 169 aa2.32□□□□□ -2.04
SHE2YKL130C YCR051WP25631 222 aa2.32□□□□□ -2.04
SHE2YKL130C SEC66P33754 206 aa2.32□□□□□ -2.04
SHE2YKL130C PMT1P33775 817 aa2.32□□□□□ -2.04
SHE2YKL130C TIF3P34167 436 aaKnown RBP2.32□□□□□ -2.04
SHE2YKL130C OCT1P35999 772 aa2.32□□□□□ -2.04
SHE2YKL130C STB6P36085 766 aa2.32□□□□□ -2.04
SHE2YKL130C APE3P37302 537 aaKnown RBP2.32□□□□□ -2.04
SHE2YKL130C ICS2P38284 255 aa2.32□□□□□ -2.04
SHE2YKL130C HXT14P42833 540 aa2.32□□□□□ -2.04
SHE2YKL130C BUD27P43573 796 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
SHE2YKL130C YFR020WP43600 232 aa2.32□□□□□ -2.04
SHE2YKL130C APT1P49435 187 aaKnown RBP2.32□□□□□ -2.04
SHE2YKL130C IMD4P50094 524 aaKnown RBP2.32□□□□□ -2.04
SHE2YKL130C UBP8P50102 471 aa2.32□□□□□ -2.04
SHE2YKL130C ART5P53244 586 aaKnown RBP2.32□□□□□ -2.04
SHE2YKL130C IPI3P53877 555 aa2.32□□□□□ -2.04
SHE2YKL130C YMR178WQ03219 274 aaKnown RBP2.32□□□□□ -2.04
SHE2YKL130C ERB1Q04660 807 aaKnown RBP2.32□□□□□ -2.04
SHE2YKL130C YLR049CQ12110 428 aa2.32□□□□□ -2.04
SHE2YKL130C YRF1-4O13559 1382 aa2.32□□□□□ -2.04
SHE2YKL130C SWR1Q05471 1514 aa2.32□□□□□ -2.04
SHE2YKL130C RAP1P11938 827 aa2.31□□□□□ -2.04
SHE2YKL130C MRP13P12686 339 aa2.31□□□□□ -2.04
SHE2YKL130C PRP16P15938 1071 aaPredicted RBP2.31□□□□□ -2.04
SHE2YKL130C CLB1P24868 471 aa2.31□□□□□ -2.04
SHE2YKL130C BOS1P25385 244 aa2.31□□□□□ -2.04
SHE2YKL130C VPH1P32563 840 aaKnown RBP2.31□□□□□ -2.04
SHE2YKL130C YME1P32795 747 aa2.31□□□□□ -2.04
SHE2YKL130C MDL1P33310 695 aa2.31□□□□□ -2.04
SHE2YKL130C YBL055CP34220 418 aaPredicted RBP2.31□□□□□ -2.04
SHE2YKL130C TSC10P38342 320 aa2.31□□□□□ -2.04
SHE2YKL130C VPS41P38959 992 aa2.31□□□□□ -2.04
SHE2YKL130C GDI1P39958 451 aaKnown RBP2.31□□□□□ -2.04
SHE2YKL130C DLD2P46681 530 aaKnown RBP2.31□□□□□ -2.04
SHE2YKL130C SGF73P53165 657 aa2.31□□□□□ -2.04
SHE2YKL130C ERG26P53199 349 aaKnown RBP2.31□□□□□ -2.04
SHE2YKL130C YPR003CP53394 754 aa2.31□□□□□ -2.04
SHE2YKL130C CRZ1P53968 678 aa2.31□□□□□ -2.04
SHE2YKL130C PFA5Q03289 374 aa2.31□□□□□ -2.04
SHE2YKL130C EMI2Q04409 500 aaKnown RBP2.31□□□□□ -2.04
SHE2YKL130C YLR345WQ06137 509 aa2.31□□□□□ -2.04
SHE2YKL130C YLR455WQ06188 304 aa2.31□□□□□ -2.04
SHE2YKL130C POS5Q06892 414 aa2.31□□□□□ -2.04
SHE2YKL130C CDC45Q08032 650 aa2.31□□□□□ -2.04
SHE2YKL130C MCH4Q08268 501 aa2.31□□□□□ -2.04
SHE2YKL130C RLM1Q12224 676 aa2.31□□□□□ -2.04
SHE2YKL130C ARG81P05085 880 aa2.3□□□□□ -2.04
SHE2YKL130C KRS1P15180 591 aaKnown RBP2.3□□□□□ -2.04
SHE2YKL130C MDH1P17505 334 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
SHE2YKL130C KGD1P20967 1014 aaKnown RBP2.3□□□□□ -2.04
SHE2YKL130C TKL1P23254 680 aaKnown RBP2.3□□□□□ -2.04
SHE2YKL130C CPR2P23285 205 aa2.3□□□□□ -2.04
SHE2YKL130C MNE1P24720 663 aa2.3□□□□□ -2.04
SHE2YKL130C BUD5P25300 642 aaPredicted RBP2.3□□□□□ -2.04
SHE2YKL130C YCR006CP25350 157 aa2.3□□□□□ -2.04
SHE2YKL130C URA7P28274 579 aaKnown RBP2.3□□□□□ -2.04
SHE2YKL130C SAC1P32368 623 aaKnown RBP2.3□□□□□ -2.04
SHE2YKL130C HCS1P34243 683 aa2.3□□□□□ -2.04
SHE2YKL130C YKL100CP34248 587 aa2.3□□□□□ -2.04
SHE2YKL130C NUP133P36161 1157 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms