RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	AZF1	P41696	914 aa		2.36	□□□□□ -2.03
NUP82	YJL061W	SNG1	P46950	547 aa		2.36	□□□□□ -2.03
NUP82	YJL061W	IPI3	P53877	555 aa		2.36	□□□□□ -2.03
NUP82	YJL061W	RPT6	Q01939	405 aa	Known RBP	2.36	□□□□□ -2.03
NUP82	YJL061W	AVL9	Q12500	764 aa		2.36	□□□□□ -2.03
NUP82	YJL061W	BAR1	P12630	587 aa		2.36	□□□□□ -2.03
NUP82	YJL061W	MRP13	P12686	339 aa		2.36	□□□□□ -2.03
NUP82	YJL061W	MRP7	P12687	371 aa		2.36	□□□□□ -2.03
NUP82	YJL061W	MET8	P15807	274 aa		2.36	□□□□□ -2.03
NUP82	YJL061W	RPN12	P32496	274 aa		2.36	□□□□□ -2.03
NUP82	YJL061W	TIF3	P34167	436 aa	Known RBP	2.36	□□□□□ -2.03
NUP82	YJL061W	YNK1	P36010	153 aa	Known RBP	2.36	□□□□□ -2.03
NUP82	YJL061W	SPC34	P36131	295 aa		2.36	□□□□□ -2.03
NUP82	YJL061W	RTT107	P38850	1070 aa		2.36	□□□□□ -2.03
NUP82	YJL061W	MAF1	P41910	395 aa		2.36	□□□□□ -2.03
NUP82	YJL061W	HOS2	P53096	452 aa	Predicted RBP	2.36	□□□□□ -2.03
NUP82	YJL061W	SHR3	Q02774	210 aa		2.36	□□□□□ -2.03
NUP82	YJL061W	MSC1	Q03104	513 aa		2.36	□□□□□ -2.03
NUP82	YJL061W	FIN1	Q03898	291 aa		2.36	□□□□□ -2.03
NUP82	YJL061W	VPS38	Q05919	439 aa		2.36	□□□□□ -2.03
NUP82	YJL061W	COG4	Q06096	861 aa		2.36	□□□□□ -2.03
NUP82	YJL061W	TSR2	Q06672	205 aa	Known RBP	2.36	□□□□□ -2.03
NUP82	YJL061W	PEP5	P12868	1029 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	PDA1	P16387	420 aa	Known RBP	2.35	□□□□□ -2.03
NUP82	YJL061W	GLN3	P18494	730 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	ACH1	P32316	526 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	ERG1	P32476	496 aa	Known RBP	2.35	□□□□□ -2.03
NUP82	YJL061W	VPS17	P32913	551 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	TCD2	P36101	447 aa	Known RBP	2.35	□□□□□ -2.03
NUP82	YJL061W	YAT2	P40017	923 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	YTA12	P40341	825 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	ARF3	P40994	183 aa	RIP-Chip data	2.35	□□□□□ -2.03	RIP-Chip
NUP82	YJL061W	ALK1	P43633	760 aa	Known RBP	2.35	□□□□□ -2.03
NUP82	YJL061W	IMD4	P50094	524 aa	Known RBP	2.35	□□□□□ -2.03
NUP82	YJL061W	ALT2	P52892	507 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	RBG2	P53295	368 aa	Known RBP	2.35	□□□□□ -2.03
NUP82	YJL061W	TDA7	P53882	636 aa	Predicted RBP	2.35	□□□□□ -2.03
NUP82	YJL061W	RHO4	Q00246	291 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	YPL014W	Q02606	381 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	MFB1	Q04922	465 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	YDL057W	Q07379	328 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	FMP45	Q07651	309 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	YEH2	Q07950	538 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	CSR2	Q12734	1121 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	CDC23	P16522	626 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	PPZ1	P26570	692 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	PAP1	P29468	568 aa	Known RBP	2.35	□□□□□ -2.03
NUP82	YJL061W	RIM2	P38127	377 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	UTP9	P38882	575 aa	Known RBP	2.35	□□□□□ -2.03
NUP82	YJL061W	NPR2	P39923	615 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	YJL068C	P40363	299 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	DIM1	P41819	318 aa	Known RBP	2.35	□□□□□ -2.03
NUP82	YJL061W	GUF1	P46943	645 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	SCS3	P53012	380 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	ARE2	P53629	642 aa	Known RBP	2.35	□□□□□ -2.03
NUP82	YJL061W	TOF2	Q02208	771 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	TDA9	Q04545	1251 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	GLO2	Q05584	274 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	DIC1	Q06143	298 aa		2.35	□□□□□ -2.03
NUP82	YJL061W	FOB1	O13329	566 aa		2.34	□□□□□ -2.03
NUP82	YJL061W	GAL80	P04387	435 aa		2.34	□□□□□ -2.03
NUP82	YJL061W	YUR1	P26725	428 aa		2.34	□□□□□ -2.03
NUP82	YJL061W	YME1	P32795	747 aa		2.34	□□□□□ -2.03
NUP82	YJL061W	GCS1	P35197	352 aa		2.34	□□□□□ -2.03
NUP82	YJL061W	SRO77	P38163	1010 aa		2.34	□□□□□ -2.03
NUP82	YJL061W	MSR1	P38714	643 aa		2.34	□□□□□ -2.03
NUP82	YJL061W	YHR210C	P38893	341 aa		2.34	□□□□□ -2.03
NUP82	YJL061W	MEP2	P41948	499 aa		2.34	□□□□□ -2.03
NUP82	YJL061W	STB2	P46679	850 aa		2.34	□□□□□ -2.03
NUP82	YJL061W	SAM50	P53969	484 aa		2.34	□□□□□ -2.03
NUP82	YJL061W	TIM10	P87108	93 aa		2.34	□□□□□ -2.03
NUP82	YJL061W	RLM1	Q12224	676 aa		2.34	□□□□□ -2.03
NUP82	YJL061W	RTP1	Q12751	981 aa		2.34	□□□□□ -2.03
NUP82	YJL061W	SEC62	P21825	274 aa		2.33	□□□□□ -2.04
NUP82	YJL061W	PRD1	P25375	712 aa		2.33	□□□□□ -2.04
NUP82	YJL061W	SHP1	P34223	423 aa		2.33	□□□□□ -2.04
NUP82	YJL061W	ECM15	P35195	104 aa		2.33	□□□□□ -2.04
NUP82	YJL061W	ERP2	P39704	215 aa		2.33	□□□□□ -2.04
NUP82	YJL061W	YER130C	P39959	443 aa		2.33	□□□□□ -2.04
NUP82	YJL061W	YJL070C	P40361	888 aa		2.33	□□□□□ -2.04
NUP82	YJL061W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	2.33	□□□□□ -2.04	not detected
NUP82	YJL061W	MET28	P40573	187 aa		2.33	□□□□□ -2.04
NUP82	YJL061W	YJR154W	P47181	346 aa		2.33	□□□□□ -2.04
NUP82	YJL061W	THI20	Q08224	551 aa		2.33	□□□□□ -2.04
NUP82	YJL061W	NRT1	Q08485	598 aa		2.33	□□□□□ -2.04
NUP82	YJL061W	PDH1	Q12428	516 aa	Known RBP	2.33	□□□□□ -2.04
NUP82	YJL061W	HSH49	Q99181	213 aa	Predicted RBP	2.33	□□□□□ -2.04
NUP82	YJL061W	ARG3	P05150	338 aa		2.33	□□□□□ -2.04
NUP82	YJL061W	PEP4	P07267	405 aa	Known RBP	2.33	□□□□□ -2.04
NUP82	YJL061W	RPS2	P25443	254 aa	Known RBP	2.33	□□□□□ -2.04
NUP82	YJL061W	WBP1	P33767	430 aa	Known RBP	2.33	□□□□□ -2.04
NUP82	YJL061W	CST26	P38226	397 aa		2.33	□□□□□ -2.04
NUP82	YJL061W	NDE1	P40215	560 aa		2.33	□□□□□ -2.04
NUP82	YJL061W	ESL1	P40456	1118 aa		2.33	□□□□□ -2.04
NUP82	YJL061W	CSM2	P40465	213 aa		2.33	□□□□□ -2.04
NUP82	YJL061W	SPO22	P40511	975 aa		2.33	□□□□□ -2.04
NUP82	YJL061W	DOT5	P40553	215 aa		2.33	□□□□□ -2.04
NUP82	YJL061W	PET130	P47065	347 aa		2.33	□□□□□ -2.04
NUP82	YJL061W	COQ9	Q05779	260 aa		2.33	□□□□□ -2.04
NUP82	YJL061W	THP1	Q08231	455 aa		2.33	□□□□□ -2.04

Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms