RNA–Protein interactions for RNA: YIR017C

MET28, Transcript of bZIP transcriptional activator in the Cbf1p-Met4p-Met28p complex, yeastyeast

Gene MET28, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MET28YIR017C SWS2P53937 143 aa9.52□□□□□ -0.89
MET28YIR017C SUB1P54000 292 aaKnown RBP9.52□□□□□ -0.89
MET28YIR017C LGE1Q02796 332 aaKnown RBP9.52□□□□□ -0.89
MET28YIR017C TRM82Q03774 444 aa9.52□□□□□ -0.89
MET28YIR017C RRP42Q12277 265 aaPredicted RBP9.52□□□□□ -0.89
MET28YIR017C RRP36Q12481 300 aaPredicted RBP9.52□□□□□ -0.89
MET28YIR017C STE3P06783 470 aa9.51□□□□□ -0.89
MET28YIR017C EXO70P19658 623 aa9.51□□□□□ -0.89
MET28YIR017C CLN2P20438 545 aa9.51□□□□□ -0.89
MET28YIR017C YCK2P23292 546 aaKnown RBP9.51□□□□□ -0.89
MET28YIR017C RPS1AP33442 255 aaKnown RBP9.51□□□□□ -0.89
MET28YIR017C UBA4P38820 440 aa9.51□□□□□ -0.89
MET28YIR017C ELO1P39540 310 aa9.51□□□□□ -0.89
MET28YIR017C YJR030CP47101 745 aa9.51□□□□□ -0.89
MET28YIR017C ECM9Q02202 377 aa9.51□□□□□ -0.89
MET28YIR017C YMR034CQ05131 434 aaPredicted RBP9.51□□□□□ -0.89
MET28YIR017C THI73Q07904 523 aa9.51□□□□□ -0.89
MET28YIR017C YLR049CQ12110 428 aa9.51□□□□□ -0.89
MET28YIR017C HSH49Q99181 213 aaPredicted RBP9.51□□□□□ -0.89
MET28YIR017C SPT3P06844 337 aa9.5□□□□□ -0.89
MET28YIR017C COS2P0CX12 379 aa9.5□□□□□ -0.89
MET28YIR017C COS3P0CX13 379 aa9.5□□□□□ -0.89
MET28YIR017C ERG6P25087 383 aaKnown RBP9.5□□□□□ -0.89
MET28YIR017C INM1P38710 295 aa9.5□□□□□ -0.89
MET28YIR017C FRT2P39734 528 aa9.5□□□□□ -0.89
MET28YIR017C ARB1P40024 610 aaKnown RBP9.5□□□□□ -0.89
MET28YIR017C COS4P43542 379 aa9.5□□□□□ -0.89
MET28YIR017C CUS2P53830 285 aaPredicted RBP9.5□□□□□ -0.89
MET28YIR017C YNL010WP53981 241 aaKnown RBP9.5□□□□□ -0.89
MET28YIR017C GAS3Q03655 524 aa9.5□□□□□ -0.89
MET28YIR017C ATG29Q12092 213 aa9.5□□□□□ -0.89
MET28YIR017C TOR2P32600 2474 aaKnown RBP9.5□□□□□ -0.89
MET28YIR017C CAR1P00812 333 aaKnown RBP9.49□□□□□ -0.89
MET28YIR017C PRP4P20053 465 aaKnown RBP9.49□□□□□ -0.89
MET28YIR017C PPH21P23594 369 aa9.49□□□□□ -0.89
MET28YIR017C BUB2P26448 306 aaPredicted RBP9.49□□□□□ -0.89
MET28YIR017C OXP1P28273 1286 aa9.49□□□□□ -0.89
MET28YIR017C CBF5P33322 483 aaKnown RBP RIP-Chip data9.49□□□□□ -0.89not detected
MET28YIR017C SOL2P37262 315 aa9.49□□□□□ -0.89
MET28YIR017C TRM7P38238 310 aaKnown RBP9.49□□□□□ -0.89
MET28YIR017C YPT35P38815 214 aaKnown RBP9.49□□□□□ -0.89
MET28YIR017C ERP5P38819 212 aa9.49□□□□□ -0.89
MET28YIR017C YAL037WP39728 267 aa9.49□□□□□ -0.89
MET28YIR017C NDE1P40215 560 aa9.49□□□□□ -0.89
MET28YIR017C FKH2P41813 862 aa9.49□□□□□ -0.89
MET28YIR017C GCD10P41814 478 aa9.49□□□□□ -0.89
MET28YIR017C SSU1P41930 458 aa9.49□□□□□ -0.89
MET28YIR017C ZIM17P42844 174 aa9.49□□□□□ -0.89
MET28YIR017C TY4A-JP47023 414 aa9.49□□□□□ -0.89
MET28YIR017C YJR154WP47181 346 aa9.49□□□□□ -0.89
MET28YIR017C GCV1P48015 400 aa9.49□□□□□ -0.89
MET28YIR017C VHS1Q03785 461 aa9.49□□□□□ -0.89
MET28YIR017C RAD34Q06665 692 aa9.49□□□□□ -0.89
MET28YIR017C IOC2Q12072 812 aa9.49□□□□□ -0.89
MET28YIR017C YPR011CQ12251 326 aa9.49□□□□□ -0.89
MET28YIR017C RGT2Q12300 763 aa9.49□□□□□ -0.89
MET28YIR017C TRP3P00937 484 aa9.48□□□□□ -0.89
MET28YIR017C AI3P03877 415 aa9.48□□□□□ -0.89
MET28YIR017C PRP16P15938 1071 aaPredicted RBP9.48□□□□□ -0.89
MET28YIR017C ARG1P22768 420 aa9.48□□□□□ -0.89
MET28YIR017C NTR2P36118 322 aaPredicted RBP9.48□□□□□ -0.89
MET28YIR017C MRPL37P36532 105 aa9.48□□□□□ -0.89
MET28YIR017C PIM1P36775 1133 aa9.48□□□□□ -0.89
MET28YIR017C CCT7P42943 550 aaKnown RBP9.48□□□□□ -0.89
MET28YIR017C STB2P46679 850 aa9.48□□□□□ -0.89
MET28YIR017C COS12P53053 380 aa9.48□□□□□ -0.89
MET28YIR017C REX2P54964 269 aaKnown RBP9.48□□□□□ -0.89
MET28YIR017C ROT1Q03691 256 aa9.48□□□□□ -0.89
MET28YIR017C YDR444WQ04093 687 aa9.48□□□□□ -0.89
MET28YIR017C GPB1Q08886 897 aa9.48□□□□□ -0.89
MET28YIR017C FMP27Q06179 2628 aa9.47□□□□□ -0.89
MET28YIR017C LAT1P12695 482 aaKnown RBP9.47□□□□□ -0.89
MET28YIR017C DBR1P24309 405 aaKnown RBP9.47□□□□□ -0.89
MET28YIR017C DEP1P31385 405 aa9.47□□□□□ -0.89
MET28YIR017C MGM101P32787 269 aaKnown RBP9.47□□□□□ -0.89
MET28YIR017C BMT2P38278 337 aa9.47□□□□□ -0.89
MET28YIR017C RFC3P38629 340 aa9.47□□□□□ -0.89
MET28YIR017C YEN1P40028 759 aa9.47□□□□□ -0.89
MET28YIR017C MET18P40469 1032 aa9.47□□□□□ -0.89
MET28YIR017C AAT1Q01802 451 aa9.47□□□□□ -0.89
MET28YIR017C EGD1Q02642 157 aaKnown RBP9.47□□□□□ -0.89
MET28YIR017C FMN1Q03778 218 aa9.47□□□□□ -0.89
MET28YIR017C ESA1Q08649 445 aa9.47□□□□□ -0.89
MET28YIR017C SUL2Q12325 893 aa9.47□□□□□ -0.89
MET28YIR017C GPR1Q12361 961 aa9.47□□□□□ -0.89
MET28YIR017C RNA1P11745 407 aaKnown RBP9.46□□□□□ -0.9
MET28YIR017C PET309P32522 965 aaPredicted RBP9.46□□□□□ -0.9
MET28YIR017C ARN1P38731 627 aa9.46□□□□□ -0.9
MET28YIR017C DMA1P38823 416 aa9.46□□□□□ -0.9
MET28YIR017C YPT32P51996 222 aaKnown RBP9.46□□□□□ -0.9
MET28YIR017C YGR053CP53234 283 aa9.46□□□□□ -0.9
MET28YIR017C SUN4P53616 420 aa9.46□□□□□ -0.9
MET28YIR017C UBP2Q01476 1272 aa9.46□□□□□ -0.9
MET28YIR017C YML096WQ04489 525 aa9.46□□□□□ -0.9
MET28YIR017C PFA4Q12006 378 aa9.46□□□□□ -0.9
MET28YIR017C RTK1Q12100 620 aaPredicted RBP9.46□□□□□ -0.9
MET28YIR017C RIB2Q12362 591 aaKnown RBP9.46□□□□□ -0.9
MET28YIR017C CAN1P04817 590 aa9.45□□□□□ -0.9
MET28YIR017C GBP2P25555 427 aaKnown RBP RIP-Chip data9.45□□□□□ -0.9not detected
MET28YIR017C MVD1P32377 396 aaKnown RBP9.45□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms