RNA–Protein interactions for RNA: YHR081W

LRP1, Transcript of Nuclear exosome-associated nucleic acid binding protein, yeast

Gene LRP1, Length 555 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LRP1	YHR081W	MF(ALPHA)1	P01149	165 aa		3	□□□□□ -1.93
LRP1	YHR081W	MRP13	P12686	339 aa		3	□□□□□ -1.93
LRP1	YHR081W	SGF29	P25554	259 aa		3	□□□□□ -1.93
LRP1	YHR081W	YIH1	P25637	258 aa		3	□□□□□ -1.93
LRP1	YHR081W	AGA1	P32323	725 aa		3	□□□□□ -1.93
LRP1	YHR081W	VPS17	P32913	551 aa		3	□□□□□ -1.93
LRP1	YHR081W	SIP2	P34164	415 aa	Known RBP	3	□□□□□ -1.93
LRP1	YHR081W	ICS2	P38284	255 aa		3	□□□□□ -1.93
LRP1	YHR081W	APT1	P49435	187 aa	Known RBP	3	□□□□□ -1.93
LRP1	YHR081W	DSD1	P53095	428 aa		3	□□□□□ -1.93
LRP1	YHR081W	RLI1	Q03195	608 aa	Known RBP	3	□□□□□ -1.93
LRP1	YHR081W	CDC45	Q08032	650 aa		3	□□□□□ -1.93
LRP1	YHR081W	NCE102	Q12207	173 aa	RIP-Chip data	3	□□□□□ -1.93	not detected
LRP1	YHR081W	APE1	P14904	514 aa		2.99	□□□□□ -1.93
LRP1	YHR081W	EST1	P17214	699 aa	Predicted RBP	2.99	□□□□□ -1.93
LRP1	YHR081W	BOS1	P25385	244 aa		2.99	□□□□□ -1.93
LRP1	YHR081W	NDC1	P32500	655 aa		2.99	□□□□□ -1.93
LRP1	YHR081W	SSE2	P32590	693 aa	Known RBP	2.99	□□□□□ -1.93
LRP1	YHR081W	TIF3	P34167	436 aa	Known RBP	2.99	□□□□□ -1.93
LRP1	YHR081W	YBR144C	P34215	104 aa		2.99	□□□□□ -1.93
LRP1	YHR081W	YBL029W	P38201	376 aa		2.99	□□□□□ -1.93
LRP1	YHR081W	YHR218W	P38899	603 aa		2.99	□□□□□ -1.93
LRP1	YHR081W	RPR2	P40571	144 aa		2.99	□□□□□ -1.93
LRP1	YHR081W	IMP4	P53941	290 aa	Known RBP	2.99	□□□□□ -1.93
LRP1	YHR081W	RPM2	Q02773	1202 aa		2.99	□□□□□ -1.93
LRP1	YHR081W	SHR3	Q02774	210 aa		2.99	□□□□□ -1.93
LRP1	YHR081W	HCR1	Q05775	265 aa	Known RBP	2.99	□□□□□ -1.93
LRP1	YHR081W	GDH1	P07262	454 aa	Known RBP	2.98	□□□□□ -1.93
LRP1	YHR081W	YCR022C	P25620	114 aa		2.98	□□□□□ -1.93
LRP1	YHR081W	PTR2	P32901	601 aa		2.98	□□□□□ -1.93
LRP1	YHR081W	OSH3	P38713	996 aa	Known RBP	2.98	□□□□□ -1.93
LRP1	YHR081W	MDM31	P38880	579 aa		2.98	□□□□□ -1.93
LRP1	YHR081W	CCT6	P39079	546 aa		2.98	□□□□□ -1.93
LRP1	YHR081W	RPH1	P39956	796 aa		2.98	□□□□□ -1.93
LRP1	YHR081W	VID27	P40157	782 aa		2.98	□□□□□ -1.93
LRP1	YHR081W	YFR016C	P43597	1233 aa	Known RBP	2.98	□□□□□ -1.93
LRP1	YHR081W	FAR3	P46671	204 aa		2.98	□□□□□ -1.93
LRP1	YHR081W	RTT101	P47050	842 aa		2.98	□□□□□ -1.93
LRP1	YHR081W	YDL186W	P48568	277 aa		2.98	□□□□□ -1.93
LRP1	YHR081W	YGR126W	P53274	230 aa		2.98	□□□□□ -1.93
LRP1	YHR081W	YGR127W	P53275	312 aa		2.98	□□□□□ -1.93
LRP1	YHR081W	IPI3	P53877	555 aa		2.98	□□□□□ -1.93
LRP1	YHR081W	GLO2	Q05584	274 aa		2.98	□□□□□ -1.93
LRP1	YHR081W	COQ9	Q05779	260 aa		2.98	□□□□□ -1.93
LRP1	YHR081W	OPY2	Q06810	360 aa		2.98	□□□□□ -1.93
LRP1	YHR081W	YDR056C	Q12025	205 aa		2.98	□□□□□ -1.93
LRP1	YHR081W	PPT2	Q12036	173 aa		2.98	□□□□□ -1.93
LRP1	YHR081W	SET6	Q12529	373 aa		2.98	□□□□□ -1.93
LRP1	YHR081W	RAD52	P06778	471 aa	Known RBP	2.97	□□□□□ -1.93
LRP1	YHR081W	PEP5	P12868	1029 aa		2.97	□□□□□ -1.93
LRP1	YHR081W	BUD14	P27637	709 aa		2.97	□□□□□ -1.93
LRP1	YHR081W	PAH1	P32567	862 aa		2.97	□□□□□ -1.93
LRP1	YHR081W	FRE1	P32791	686 aa		2.97	□□□□□ -1.93
LRP1	YHR081W	YKL023W	P36103	277 aa	Known RBP	2.97	□□□□□ -1.93
LRP1	YHR081W	MTC4	P38335	694 aa	Known RBP	2.97	□□□□□ -1.93
LRP1	YHR081W	SGN1	P40561	250 aa	Known RBP RIP-Chip data	2.97	□□□□□ -1.93	not detected
LRP1	YHR081W	SCD6	P45978	349 aa	Known RBP RIP-Chip data	2.97	□□□□□ -1.93	not detected
LRP1	YHR081W	YGL082W	P53155	381 aa		2.97	□□□□□ -1.93
LRP1	YHR081W	SVL3	Q03088	825 aa	Known RBP	2.97	□□□□□ -1.93
LRP1	YHR081W	FMP40	Q08968	688 aa	Predicted RBP	2.97	□□□□□ -1.93
LRP1	YHR081W	AYT1	Q12226	474 aa		2.97	□□□□□ -1.93
LRP1	YHR081W	HEM2	P05373	342 aa		2.96	□□□□□ -1.94
LRP1	YHR081W	PEP4	P07267	405 aa	Known RBP	2.96	□□□□□ -1.94
LRP1	YHR081W	MTF1	P14908	341 aa	Known RBP	2.96	□□□□□ -1.94
LRP1	YHR081W	AAC3	P18238	307 aa		2.96	□□□□□ -1.94
LRP1	YHR081W	MCK1	P21965	375 aa	Known RBP	2.96	□□□□□ -1.94
LRP1	YHR081W	SAN1	P22470	610 aa		2.96	□□□□□ -1.94
LRP1	YHR081W	ELO2	P25358	347 aa		2.96	□□□□□ -1.94
LRP1	YHR081W	YOX1	P34161	385 aa		2.96	□□□□□ -1.94
LRP1	YHR081W	YNK1	P36010	153 aa	Known RBP	2.96	□□□□□ -1.94
LRP1	YHR081W	YTA12	P40341	825 aa		2.96	□□□□□ -1.94
LRP1	YHR081W	YJL213W	P40896	331 aa		2.96	□□□□□ -1.94
LRP1	YHR081W	ETT1	Q08421	412 aa	Known RBP	2.96	□□□□□ -1.94
LRP1	YHR081W	YOR365C	Q08844	703 aa		2.96	□□□□□ -1.94
LRP1	YHR081W	HUA2	Q12134	243 aa		2.96	□□□□□ -1.94
LRP1	YHR081W	HSH49	Q99181	213 aa	Predicted RBP	2.96	□□□□□ -1.94
LRP1	YHR081W	AMD1	P15274	810 aa	Known RBP	2.95	□□□□□ -1.94
LRP1	YHR081W	ART10	P18634	518 aa	Known RBP	2.95	□□□□□ -1.94
LRP1	YHR081W	CPR3	P25719	182 aa		2.95	□□□□□ -1.94
LRP1	YHR081W	DPB3	P27344	201 aa		2.95	□□□□□ -1.94
LRP1	YHR081W	SPC110	P32380	944 aa		2.95	□□□□□ -1.94
LRP1	YHR081W	CIN4	P39110	191 aa		2.95	□□□□□ -1.94
LRP1	YHR081W	CSM2	P40465	213 aa		2.95	□□□□□ -1.94
LRP1	YHR081W	ROK1	P45818	564 aa	Predicted RBP	2.95	□□□□□ -1.94
LRP1	YHR081W	IMD4	P50094	524 aa	Known RBP	2.95	□□□□□ -1.94
LRP1	YHR081W	COS10	P52924	374 aa		2.95	□□□□□ -1.94
LRP1	YHR081W	SLD5	Q03406	294 aa		2.95	□□□□□ -1.94
LRP1	YHR081W	SDH5	Q08230	162 aa		2.95	□□□□□ -1.94
LRP1	YHR081W	NOP58	Q12499	511 aa	Known RBP	2.95	□□□□□ -1.94
LRP1	YHR081W	YPT6	Q99260	215 aa		2.95	□□□□□ -1.94
LRP1	YHR081W	PCA1	P38360	1216 aa		2.94	□□□□□ -1.94
LRP1	YHR081W	YHR210C	P38893	341 aa		2.94	□□□□□ -1.94
LRP1	YHR081W	AIM22	P47051	409 aa		2.94	□□□□□ -1.94
LRP1	YHR081W	YJR154W	P47181	346 aa		2.94	□□□□□ -1.94
LRP1	YHR081W	UPF3	P48412	387 aa	Known RBP	2.94	□□□□□ -1.94
LRP1	YHR081W	SYO1	Q07395	620 aa		2.94	□□□□□ -1.94
LRP1	YHR081W	YEH1	Q07804	573 aa		2.94	□□□□□ -1.94
LRP1	YHR081W	ENT1	Q12518	454 aa		2.94	□□□□□ -1.94
LRP1	YHR081W	CYB2	P00175	591 aa		2.93	□□□□□ -1.94
LRP1	YHR081W	CAR1	P00812	333 aa	Known RBP	2.93	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 117.7 ms