RNA–Protein interactions for RNA: YHR053C

CUP1-1, Transcript of Metallothionein, yeastyeast

Gene CUP1-1, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-1YHR053C SEC53P07283 254 aaKnown RBP3.94□□□□□ -1.78
CUP1-1YHR053C PEP5P12868 1029 aa3.94□□□□□ -1.78
CUP1-1YHR053C KAR3P17119 729 aa3.94□□□□□ -1.78
CUP1-1YHR053C ECM15P35195 104 aa3.94□□□□□ -1.78
CUP1-1YHR053C CIN4P39110 191 aa3.94□□□□□ -1.78
CUP1-1YHR053C LCL3P53153 274 aa3.94□□□□□ -1.78
CUP1-1YHR053C RHO4Q00246 291 aa3.94□□□□□ -1.78
CUP1-1YHR053C RBA50Q04418 439 aa3.94□□□□□ -1.78
CUP1-1YHR053C YKU80Q04437 629 aa3.94□□□□□ -1.78
CUP1-1YHR053C THI20Q08224 551 aa3.94□□□□□ -1.78
CUP1-1YHR053C YPL272CQ08984 517 aa3.94□□□□□ -1.78
CUP1-1YHR053C SPE4Q12455 300 aa3.94□□□□□ -1.78
CUP1-1YHR053C SGF29P25554 259 aa3.93□□□□□ -1.78
CUP1-1YHR053C PAH1P32567 862 aa3.93□□□□□ -1.78
CUP1-1YHR053C APT1P49435 187 aaKnown RBP3.93□□□□□ -1.78
CUP1-1YHR053C ALT2P52892 507 aa3.93□□□□□ -1.78
CUP1-1YHR053C PPT2Q12036 173 aa3.93□□□□□ -1.78
CUP1-1YHR053C RPS2P25443 254 aaKnown RBP3.92□□□□□ -1.78
CUP1-1YHR053C SEF1P34228 1148 aa3.92□□□□□ -1.78
CUP1-1YHR053C NOP4P37838 685 aaKnown RBP3.92□□□□□ -1.78
CUP1-1YHR053C MDM31P38880 579 aa3.92□□□□□ -1.78
CUP1-1YHR053C FLC2P39719 783 aa3.92□□□□□ -1.78
CUP1-1YHR053C NOP16P40007 231 aaKnown RBP3.92□□□□□ -1.78
CUP1-1YHR053C TMA108P40462 946 aa3.92□□□□□ -1.78
CUP1-1YHR053C CSM2P40465 213 aa3.92□□□□□ -1.78
CUP1-1YHR053C VID30P53076 958 aa3.92□□□□□ -1.78
CUP1-1YHR053C DSD1P53095 428 aa3.92□□□□□ -1.78
CUP1-1YHR053C YDL057WQ07379 328 aa3.92□□□□□ -1.78
CUP1-1YHR053C YDR056CQ12025 205 aa3.92□□□□□ -1.78
CUP1-1YHR053C SEM1O94742 89 aa3.91□□□□□ -1.78
CUP1-1YHR053C MTF1P14908 341 aaKnown RBP3.91□□□□□ -1.78
CUP1-1YHR053C EST1P17214 699 aaPredicted RBP3.91□□□□□ -1.78
CUP1-1YHR053C ART10P18634 518 aaKnown RBP3.91□□□□□ -1.78
CUP1-1YHR053C GFD2P25370 566 aaKnown RBP3.91□□□□□ -1.78
CUP1-1YHR053C PTR2P32901 601 aa3.91□□□□□ -1.78
CUP1-1YHR053C SGS1P35187 1447 aa3.91□□□□□ -1.78
CUP1-1YHR053C DHH1P39517 506 aaKnown RBP3.91□□□□□ -1.78
CUP1-1YHR053C ALG5P40350 334 aa3.91□□□□□ -1.78
CUP1-1YHR053C MSC1Q03104 513 aa3.91□□□□□ -1.78
CUP1-1YHR053C NGL3Q03210 505 aa3.91□□□□□ -1.78
CUP1-1YHR053C YEH1Q07804 573 aa3.91□□□□□ -1.78
CUP1-1YHR053C NMD4Q12129 218 aa3.91□□□□□ -1.78
CUP1-1YHR053C CAR1P00812 333 aaKnown RBP3.9□□□□□ -1.79
CUP1-1YHR053C MRS3P10566 314 aa3.9□□□□□ -1.79
CUP1-1YHR053C APE1P14904 514 aa3.9□□□□□ -1.79
CUP1-1YHR053C NDC1P32500 655 aa3.9□□□□□ -1.79
CUP1-1YHR053C IPI3P53877 555 aa3.9□□□□□ -1.79
CUP1-1YHR053C SCW10Q04951 389 aa3.9□□□□□ -1.79
CUP1-1YHR053C RCN2Q12044 265 aa3.9□□□□□ -1.79
CUP1-1YHR053C YBR298C-AQ8TGK4 73 aa3.9□□□□□ -1.79
CUP1-1YHR053C AAC3P18238 307 aa3.89□□□□□ -1.79
CUP1-1YHR053C SAN1P22470 610 aa3.89□□□□□ -1.79
CUP1-1YHR053C SIP2P34164 415 aaKnown RBP3.89□□□□□ -1.79
CUP1-1YHR053C OSH3P38713 996 aaKnown RBP3.89□□□□□ -1.79
CUP1-1YHR053C YHR210CP38893 341 aa3.89□□□□□ -1.79
CUP1-1YHR053C RTT101P47050 842 aa3.89□□□□□ -1.79
CUP1-1YHR053C YJR154WP47181 346 aa3.89□□□□□ -1.79
CUP1-1YHR053C BUD32P53323 261 aa3.89□□□□□ -1.79
CUP1-1YHR053C RPM2Q02773 1202 aa3.89□□□□□ -1.79
CUP1-1YHR053C HCR1Q05775 265 aaKnown RBP3.89□□□□□ -1.79
CUP1-1YHR053C YPT6Q99260 215 aa3.89□□□□□ -1.79
CUP1-1YHR053C MRP13P12686 339 aa3.88□□□□□ -1.79
CUP1-1YHR053C BUD14P27637 709 aa3.88□□□□□ -1.79
CUP1-1YHR053C PEP3P27801 918 aa3.88□□□□□ -1.79
CUP1-1YHR053C REG2P38232 338 aa3.88□□□□□ -1.79
CUP1-1YHR053C CCT6P39079 546 aa3.88□□□□□ -1.79
CUP1-1YHR053C ALK1P43633 760 aaKnown RBP3.88□□□□□ -1.79
CUP1-1YHR053C RBG2P53295 368 aaKnown RBP3.88□□□□□ -1.79
CUP1-1YHR053C YMR087WQ04299 284 aa3.88□□□□□ -1.79
CUP1-1YHR053C SET6Q12529 373 aa3.88□□□□□ -1.79
CUP1-1YHR053C YJR112W-AQ3E743 109 aa3.88□□□□□ -1.79
CUP1-1YHR053C RPL15AP05748 204 aaKnown RBP3.87□□□□□ -1.79
CUP1-1YHR053C PAP1P29468 568 aaKnown RBP3.87□□□□□ -1.79
CUP1-1YHR053C TIF3P34167 436 aaKnown RBP3.87□□□□□ -1.79
CUP1-1YHR053C SHP1P34223 423 aa3.87□□□□□ -1.79
CUP1-1YHR053C VPS52P39904 641 aa3.87□□□□□ -1.79
CUP1-1YHR053C ROK1P45818 564 aaPredicted RBP3.87□□□□□ -1.79
CUP1-1YHR053C YGR066CP53242 292 aa3.87□□□□□ -1.79
CUP1-1YHR053C TOF2Q02208 771 aa3.87□□□□□ -1.79
CUP1-1YHR053C CTI6Q08923 506 aa3.87□□□□□ -1.79
CUP1-1YHR053C NCE102Q12207 173 aaRIP-Chip data3.87□□□□□ -1.79not detected
CUP1-1YHR053C HSH49Q99181 213 aaPredicted RBP3.87□□□□□ -1.79
CUP1-1YHR053C NPR2P39923 615 aa3.86□□□□□ -1.79
CUP1-1YHR053C RPH1P39956 796 aa3.86□□□□□ -1.79
CUP1-1YHR053C YJL213WP40896 331 aa3.86□□□□□ -1.79
CUP1-1YHR053C SCD6P45978 349 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
CUP1-1YHR053C IMD4P50094 524 aaKnown RBP3.86□□□□□ -1.79
CUP1-1YHR053C IMP4P53941 290 aaKnown RBP3.86□□□□□ -1.79
CUP1-1YHR053C IVY1Q04934 453 aa3.86□□□□□ -1.79
CUP1-1YHR053C ERP1Q05359 219 aaKnown RBP3.86□□□□□ -1.79
CUP1-1YHR053C VPS38Q05919 439 aa3.86□□□□□ -1.79
CUP1-1YHR053C THP1Q08231 455 aa3.86□□□□□ -1.79
CUP1-1YHR053C YOR365CQ08844 703 aa3.86□□□□□ -1.79
CUP1-1YHR053C YDL009CQ12210 107 aa3.86□□□□□ -1.79
CUP1-1YHR053C GDH1P07262 454 aaKnown RBP3.85□□□□□ -1.79
CUP1-1YHR053C PEP4P07267 405 aaKnown RBP3.85□□□□□ -1.79
CUP1-1YHR053C EXO70P19658 623 aa3.85□□□□□ -1.79
CUP1-1YHR053C SGV1P23293 657 aaKnown RBP3.85□□□□□ -1.79
CUP1-1YHR053C YCR007CP25354 239 aa3.85□□□□□ -1.79
CUP1-1YHR053C CPR3P25719 182 aa3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms