RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKN1	YGR143W	YPT6	Q99260	215 aa		5.81	□□□□□ -1.48
SKN1	YGR143W	CBP3	P21560	335 aa		5.81	□□□□□ -1.48
SKN1	YGR143W	HRR25	P29295	494 aa	Known RBP	5.81	□□□□□ -1.48
SKN1	YGR143W	CCR4	P31384	837 aa	Known RBP	5.81	□□□□□ -1.48
SKN1	YGR143W	YKL077W	P36081	392 aa		5.81	□□□□□ -1.48
SKN1	YGR143W	NVJ1	P38881	321 aa		5.81	□□□□□ -1.48
SKN1	YGR143W	MNN1	P39106	762 aa		5.81	□□□□□ -1.48
SKN1	YGR143W	PCL6	P40038	420 aa		5.81	□□□□□ -1.48
SKN1	YGR143W	CUL3	P53202	744 aa		5.81	□□□□□ -1.48
SKN1	YGR143W	YGR026W	P53217	278 aa		5.81	□□□□□ -1.48
SKN1	YGR143W	IMO32	P53219	342 aa		5.81	□□□□□ -1.48
SKN1	YGR143W	REH1	Q06709	432 aa		5.81	□□□□□ -1.48
SKN1	YGR143W	YOR019W	Q99248	730 aa		5.81	□□□□□ -1.48
SKN1	YGR143W	TUB3	P09734	445 aa	Known RBP	5.8	□□□□□ -1.48
SKN1	YGR143W	CTR86	P25355	563 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	CPR3	P25719	182 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	DAL3	P32459	195 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	JEN1	P36035	616 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	GIC1	P38785	314 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	XDJ1	P39102	459 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	RSP5	P39940	809 aa	Known RBP	5.8	□□□□□ -1.48
SKN1	YGR143W	YIL161W	P40449	235 aa	Known RBP	5.8	□□□□□ -1.48
SKN1	YGR143W	RPE1	P46969	238 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	JHD2	P47156	728 aa	Predicted RBP	5.8	□□□□□ -1.48
SKN1	YGR143W	AMA1	P50082	593 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	SLX9	P53251	210 aa	Predicted RBP	5.8	□□□□□ -1.48
SKN1	YGR143W	KTR6	P54070	446 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	DAK1	P54838	584 aa	Known RBP	5.8	□□□□□ -1.48
SKN1	YGR143W	VID22	Q05934	901 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	PIB1	Q06651	286 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	BRE4	Q07660	1125 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	RCL1	Q08096	367 aa	Predicted RBP	5.8	□□□□□ -1.48
SKN1	YGR143W	HFI1	Q12060	488 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	RRP12	Q12754	1228 aa	Known RBP	5.8	□□□□□ -1.48
SKN1	YGR143W	FRS1	P15624	595 aa	Known RBP	5.8	□□□□□ -1.48
SKN1	YGR143W	SPO16	P17122	198 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	GRX2	P17695	143 aa	Known RBP	5.8	□□□□□ -1.48
SKN1	YGR143W	DAL81	P21657	970 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	CHL1	P22516	861 aa	Predicted RBP	5.8	□□□□□ -1.48
SKN1	YGR143W	GFD2	P25370	566 aa	Known RBP	5.8	□□□□□ -1.48
SKN1	YGR143W	IMP2'	P32351	346 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	SSE2	P32590	693 aa	Known RBP	5.8	□□□□□ -1.48
SKN1	YGR143W	SAC6	P32599	642 aa	Known RBP	5.8	□□□□□ -1.48
SKN1	YGR143W	HBS1	P32769	611 aa	Known RBP	5.8	□□□□□ -1.48
SKN1	YGR143W	LHP1	P33399	275 aa	Known RBP	5.8	□□□□□ -1.48
SKN1	YGR143W	RER2	P35196	286 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	HES1	P35843	434 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	MAE1	P36013	669 aa	Known RBP	5.8	□□□□□ -1.48
SKN1	YGR143W	NTR2	P36118	322 aa	Predicted RBP	5.8	□□□□□ -1.48
SKN1	YGR143W	YBR139W	P38109	508 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	MMS4	P38257	691 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	PCA1	P38360	1216 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	HXT14	P42833	540 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	ALR2	P43553	858 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	DRN1	P53255	507 aa	Known RBP	5.8	□□□□□ -1.48
SKN1	YGR143W	CWC24	P53769	259 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	YML131W	Q03102	365 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	RAD30	Q04049	632 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	RRT8	Q08219	342 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	GYP1	Q08484	637 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	TGS1	Q12052	315 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	YHR213W-A	Q8TGT4	77 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	TSC13	Q99190	310 aa		5.8	□□□□□ -1.48
SKN1	YGR143W	ADE5,7	P07244	802 aa	Known RBP	5.79	□□□□□ -1.48
SKN1	YGR143W	SPO12	P17123	173 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	PRP9	P19736	530 aa	Known RBP	5.79	□□□□□ -1.48
SKN1	YGR143W	CMK2	P22517	447 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	MIH1	P23748	554 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	CPR4	P25334	318 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	ATP7	P30902	174 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	ECM25	P32525	599 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	MSN4	P33749	630 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	RFT1	P38206	574 aa	Predicted RBP	5.79	□□□□□ -1.48
SKN1	YGR143W	YBP1	P38315	674 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	RRP3	P38712	501 aa	Known RBP	5.79	□□□□□ -1.48
SKN1	YGR143W	UBA4	P38820	440 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	LYS9	P38999	446 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	PAC1	P39946	494 aa	Known RBP	5.79	□□□□□ -1.48
SKN1	YGR143W	SOK1	P40317	901 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	RFC2	P40348	353 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	ATM1	P40416	690 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	CCT8	P47079	568 aa	Known RBP	5.79	□□□□□ -1.48
SKN1	YGR143W	BIR1	P47134	954 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	PRM1	P53835	661 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	SED5	Q01590	340 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	RPT6	Q01939	405 aa	Known RBP	5.79	□□□□□ -1.48
SKN1	YGR143W	MRPL13	Q02204	264 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	CWC27	Q02770	301 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	EEB1	Q02891	456 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	SOV1	Q04748	898 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	SUE1	Q06524	206 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	FEX2	Q08991	375 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	PIN2	Q12057	282 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	DFG16	Q99234	619 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	ATR1	P13090	542 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	SRV2	P17555	526 aa	Known RBP	5.79	□□□□□ -1.48
SKN1	YGR143W	SGV1	P23293	657 aa	Known RBP	5.79	□□□□□ -1.48
SKN1	YGR143W	PER1	P25625	357 aa		5.79	□□□□□ -1.48
SKN1	YGR143W	SBA1	P28707	216 aa	Known RBP	5.79	□□□□□ -1.48
SKN1	YGR143W	YUH1	P35127	236 aa		5.79	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms