RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W STT3P39007 718 aaKnown RBP3.23□□□□□ -1.89
USE1YGL098W YAT2P40017 923 aa3.23□□□□□ -1.89
USE1YGL098W VHR1P40522 640 aa3.23□□□□□ -1.89
USE1YGL098W VMA13P41807 478 aaKnown RBP3.23□□□□□ -1.89
USE1YGL098W THI6P41835 540 aa3.23□□□□□ -1.89
USE1YGL098W QRI1P43123 477 aaKnown RBP3.23□□□□□ -1.89
USE1YGL098W AGP3P43548 558 aa3.23□□□□□ -1.89
USE1YGL098W CNN1P43618 361 aa3.23□□□□□ -1.89
USE1YGL098W BNA6P43619 295 aa3.23□□□□□ -1.89
USE1YGL098W HOC1P47124 396 aa3.23□□□□□ -1.89
USE1YGL098W HSH155P49955 971 aaKnown RBP3.23□□□□□ -1.89
USE1YGL098W UBC12P52491 188 aa3.23□□□□□ -1.89
USE1YGL098W MTO1P53070 669 aa3.23□□□□□ -1.89
USE1YGL098W COG1P53079 417 aa3.23□□□□□ -1.89
USE1YGL098W CUL3P53202 744 aa3.23□□□□□ -1.89
USE1YGL098W PBP1P53297 722 aaKnown RBP3.23□□□□□ -1.89
USE1YGL098W SOK2P53438 785 aaPredicted RBP3.23□□□□□ -1.89
USE1YGL098W RCF2P53721 224 aa3.23□□□□□ -1.89
USE1YGL098W YPL068CQ02749 293 aa3.23□□□□□ -1.89
USE1YGL098W YDR541CQ03049 344 aa3.23□□□□□ -1.89
USE1YGL098W TRM82Q03774 444 aa3.23□□□□□ -1.89
USE1YGL098W ATG16Q03818 150 aa3.23□□□□□ -1.89
USE1YGL098W TVP15Q03860 143 aa3.23□□□□□ -1.89
USE1YGL098W SIZ1Q04195 904 aa3.23□□□□□ -1.89
USE1YGL098W TAF11Q04226 346 aa3.23□□□□□ -1.89
USE1YGL098W RBS1Q05672 457 aaKnown RBP3.23□□□□□ -1.89
USE1YGL098W CRR1Q05790 422 aa3.23□□□□□ -1.89
USE1YGL098W YLR297WQ05899 129 aa3.23□□□□□ -1.89
USE1YGL098W DUS3Q06053 668 aaKnown RBP3.23□□□□□ -1.89
USE1YGL098W LUC7Q07508 261 aaPredicted RBP3.23□□□□□ -1.89
USE1YGL098W THI20Q08224 551 aa3.23□□□□□ -1.89
USE1YGL098W AAD15Q08361 143 aa3.23□□□□□ -1.89
USE1YGL098W MUM3Q08750 479 aa3.23□□□□□ -1.89
USE1YGL098W MLH3Q12083 715 aa3.23□□□□□ -1.89
USE1YGL098W RPN6Q12377 434 aa3.23□□□□□ -1.89
USE1YGL098W DFG16Q99234 619 aa3.23□□□□□ -1.89
USE1YGL098W YBR085C-AO43137 85 aa3.22□□□□□ -1.89
USE1YGL098W TUF1P02992 437 aaKnown RBP3.22□□□□□ -1.89
USE1YGL098W TPK2P06245 380 aa3.22□□□□□ -1.89
USE1YGL098W RHO1P06780 209 aaKnown RBP3.22□□□□□ -1.89
USE1YGL098W RAD10P06838 210 aa3.22□□□□□ -1.89
USE1YGL098W BCY1P07278 416 aaKnown RBP3.22□□□□□ -1.89
USE1YGL098W MSS18P08593 268 aa3.22□□□□□ -1.89
USE1YGL098W PHO8P11491 566 aa3.22□□□□□ -1.89
USE1YGL098W LAT1P12695 482 aaKnown RBP3.22□□□□□ -1.89
USE1YGL098W GUK1P15454 187 aaKnown RBP3.22□□□□□ -1.89
USE1YGL098W HPR1P17629 752 aaKnown RBP3.22□□□□□ -1.89
USE1YGL098W RNR3P21672 869 aaKnown RBP3.22□□□□□ -1.89
USE1YGL098W PRP28P23394 588 aa3.22□□□□□ -1.89
USE1YGL098W VMA16P23968 213 aa3.22□□□□□ -1.89
USE1YGL098W PTP1P25044 335 aa3.22□□□□□ -1.89
USE1YGL098W GIT1P25346 518 aa3.22□□□□□ -1.89
USE1YGL098W CTR86P25355 563 aa3.22□□□□□ -1.89
USE1YGL098W MGT1P26188 188 aa3.22□□□□□ -1.89
USE1YGL098W NTG1P31378 399 aa3.22□□□□□ -1.89
USE1YGL098W MEI5P32489 222 aa3.22□□□□□ -1.89
USE1YGL098W NGG1P32494 702 aa3.22□□□□□ -1.89
USE1YGL098W PRP21P32524 280 aaPredicted RBP3.22□□□□□ -1.89
USE1YGL098W NGR1P32831 672 aaKnown RBP3.22□□□□□ -1.89
USE1YGL098W TOD6P34219 525 aa3.22□□□□□ -1.89
USE1YGL098W YPT52P36018 234 aaKnown RBP3.22□□□□□ -1.89
USE1YGL098W CBT1P36038 271 aaPredicted RBP3.22□□□□□ -1.89
USE1YGL098W RRN3P36070 627 aa3.22□□□□□ -1.89
USE1YGL098W ABZ1P37254 787 aaPredicted RBP3.22□□□□□ -1.89
USE1YGL098W YMR262WP38430 313 aa3.22□□□□□ -1.89
USE1YGL098W PRS2P38620 318 aaKnown RBP3.22□□□□□ -1.89
USE1YGL098W YHR045WP38775 560 aa3.22□□□□□ -1.89
USE1YGL098W IPI1P38803 334 aaPredicted RBP3.22□□□□□ -1.89
USE1YGL098W EGD2P38879 174 aaKnown RBP3.22□□□□□ -1.89
USE1YGL098W SPF1P39986 1215 aaKnown RBP3.22□□□□□ -1.89
USE1YGL098W CIN5P40917 295 aa3.22□□□□□ -1.89
USE1YGL098W UFE1P41834 346 aa3.22□□□□□ -1.89
USE1YGL098W SER2P42941 309 aa3.22□□□□□ -1.89
USE1YGL098W RGD2P43556 714 aa3.22□□□□□ -1.89
USE1YGL098W RPE1P46969 238 aa3.22□□□□□ -1.89
USE1YGL098W RTT101P47050 842 aa3.22□□□□□ -1.89
USE1YGL098W IRC18P47056 224 aa3.22□□□□□ -1.89
USE1YGL098W YJL016WP47072 561 aa3.22□□□□□ -1.89
USE1YGL098W ECM27P47144 725 aa3.22□□□□□ -1.89
USE1YGL098W UPF3P48412 387 aaKnown RBP3.22□□□□□ -1.89
USE1YGL098W RPS12P48589 143 aaKnown RBP3.22□□□□□ -1.89
USE1YGL098W ORC5P50874 479 aa3.22□□□□□ -1.89
USE1YGL098W SLD3P53135 668 aa3.22□□□□□ -1.89
USE1YGL098W FMP48P53233 369 aa3.22□□□□□ -1.89
USE1YGL098W GPI1P53306 609 aa3.22□□□□□ -1.89
USE1YGL098W BIO4P53630 237 aa3.22□□□□□ -1.89
USE1YGL098W YNL193WP53870 558 aa3.22□□□□□ -1.89
USE1YGL098W SDH1Q00711 640 aa3.22□□□□□ -1.89
USE1YGL098W PFA5Q03289 374 aa3.22□□□□□ -1.89
USE1YGL098W SNX41Q04053 625 aa3.22□□□□□ -1.89
USE1YGL098W APC4Q04601 652 aa3.22□□□□□ -1.89
USE1YGL098W TFC6Q06339 672 aa3.22□□□□□ -1.89
USE1YGL098W ULA1Q12059 462 aa3.22□□□□□ -1.89
USE1YGL098W YPR022CQ12139 1133 aa3.22□□□□□ -1.89
USE1YGL098W MDM32Q12171 622 aa3.22□□□□□ -1.89
USE1YGL098W OSW2Q12202 724 aa3.22□□□□□ -1.89
USE1YGL098W RRD2Q12461 358 aa3.22□□□□□ -1.89
USE1YGL098W SET6Q12529 373 aa3.22□□□□□ -1.89
USE1YGL098W GCN4P03069 281 aa3.21□□□□□ -1.9
USE1YGL098W IMA3P0CW40 589 aa3.21□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms