RNA–Protein interactions for RNA: YFL047W

RGD2, Transcript of GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p, yeastyeast

Gene RGD2, Length 2,145 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD2YFL047W SIT1P39980 628 aa6.59□□□□□ -1.35
RGD2YFL047W ALG8P40351 577 aa6.59□□□□□ -1.35
RGD2YFL047W PET130P47065 347 aa6.59□□□□□ -1.35
RGD2YFL047W YPT32P51996 222 aaKnown RBP6.59□□□□□ -1.35
RGD2YFL047W TFB3Q03290 321 aa6.59□□□□□ -1.35
RGD2YFL047W HER2Q03557 464 aa6.59□□□□□ -1.35
RGD2YFL047W YHC1Q05900 231 aaKnown RBP6.59□□□□□ -1.35
RGD2YFL047W YLL032CQ07834 825 aaKnown RBP RIP-Chip data6.59□□□□□ -1.35not detected
RGD2YFL047W RSA1Q08932 381 aa6.59□□□□□ -1.35
RGD2YFL047W LPX1Q12405 387 aaKnown RBP6.59□□□□□ -1.35
RGD2YFL047W PFK27Q12471 397 aaPredicted RBP6.59□□□□□ -1.35
RGD2YFL047W TIF6Q12522 245 aaKnown RBP6.59□□□□□ -1.35
RGD2YFL047W TPK3P05986 398 aa6.58□□□□□ -1.36
RGD2YFL047W TEC1P18412 486 aa6.58□□□□□ -1.36
RGD2YFL047W NTG1P31378 399 aa6.58□□□□□ -1.36
RGD2YFL047W MF(ALPHA)2P32435 120 aa6.58□□□□□ -1.36
RGD2YFL047W COX13P32799 129 aa6.58□□□□□ -1.36
RGD2YFL047W ALY1P36117 915 aa6.58□□□□□ -1.36
RGD2YFL047W SPC34P36131 295 aa6.58□□□□□ -1.36
RGD2YFL047W RFS1P38234 210 aaKnown RBP6.58□□□□□ -1.36
RGD2YFL047W SSZ1P38788 538 aaKnown RBP6.58□□□□□ -1.36
RGD2YFL047W MPT5P39016 859 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36not detected
RGD2YFL047W VAC8P39968 578 aa6.58□□□□□ -1.36
RGD2YFL047W IES5P40060 125 aa6.58□□□□□ -1.36
RGD2YFL047W GCD10P41814 478 aa6.58□□□□□ -1.36
RGD2YFL047W MTR3P48240 250 aaPredicted RBP6.58□□□□□ -1.36
RGD2YFL047W UPF3P48412 387 aaKnown RBP6.58□□□□□ -1.36
RGD2YFL047W COG1P53079 417 aa6.58□□□□□ -1.36
RGD2YFL047W UGO1Q03327 502 aa6.58□□□□□ -1.36
RGD2YFL047W SSQ1Q05931 657 aaPredicted RBP6.58□□□□□ -1.36
RGD2YFL047W NDL1Q06568 189 aa6.58□□□□□ -1.36
RGD2YFL047W HRK1Q08732 759 aaKnown RBP6.58□□□□□ -1.36
RGD2YFL047W MAM3Q12296 706 aa6.58□□□□□ -1.36
RGD2YFL047W YOL159C-AQ3E769 90 aa6.58□□□□□ -1.36
RGD2YFL047W RPS4AP0CX35 261 aaKnown RBP6.58□□□□□ -1.36
RGD2YFL047W RPS4BP0CX36 261 aaKnown RBP6.58□□□□□ -1.36
RGD2YFL047W OCA4P25366 362 aa6.58□□□□□ -1.36
RGD2YFL047W PEX3P28795 441 aa6.58□□□□□ -1.36
RGD2YFL047W MRPL9P31334 269 aa6.58□□□□□ -1.36
RGD2YFL047W SFP1P32432 683 aa6.58□□□□□ -1.36
RGD2YFL047W GCS1P35197 352 aa6.58□□□□□ -1.36
RGD2YFL047W THI80P35202 319 aa6.58□□□□□ -1.36
RGD2YFL047W CTF13P35203 478 aa6.58□□□□□ -1.36
RGD2YFL047W YBR139WP38109 508 aa6.58□□□□□ -1.36
RGD2YFL047W LDB7P38210 180 aa6.58□□□□□ -1.36
RGD2YFL047W ERV46P39727 415 aa6.58□□□□□ -1.36
RGD2YFL047W KRE29P40026 464 aa6.58□□□□□ -1.36
RGD2YFL047W THO1P40040 218 aaKnown RBP6.58□□□□□ -1.36
RGD2YFL047W GTS1P40956 396 aa6.58□□□□□ -1.36
RGD2YFL047W BST1P43571 1029 aa6.58□□□□□ -1.36
RGD2YFL047W RMD8P43620 662 aa6.58□□□□□ -1.36
RGD2YFL047W PRP24P49960 444 aaKnown RBP6.58□□□□□ -1.36
RGD2YFL047W AMA1P50082 593 aa6.58□□□□□ -1.36
RGD2YFL047W MCP2Q06567 569 aa6.58□□□□□ -1.36
RGD2YFL047W NTG2Q08214 380 aa6.58□□□□□ -1.36
RGD2YFL047W GBP2P25555 427 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
RGD2YFL047W ADK2P26364 225 aa6.57□□□□□ -1.36
RGD2YFL047W VMA6P32366 345 aaKnown RBP6.57□□□□□ -1.36
RGD2YFL047W ARP2P32381 391 aaKnown RBP6.57□□□□□ -1.36
RGD2YFL047W YKL100CP34248 587 aa6.57□□□□□ -1.36
RGD2YFL047W PHO11P35842 467 aa6.57□□□□□ -1.36
RGD2YFL047W YKR051WP36142 418 aa6.57□□□□□ -1.36
RGD2YFL047W APM3P38153 483 aa6.57□□□□□ -1.36
RGD2YFL047W ECM8P38246 354 aa6.57□□□□□ -1.36
RGD2YFL047W PHO12P38693 467 aa6.57□□□□□ -1.36
RGD2YFL047W EGD2P38879 174 aaKnown RBP6.57□□□□□ -1.36
RGD2YFL047W DHH1P39517 506 aaKnown RBP6.57□□□□□ -1.36
RGD2YFL047W RGI1P40043 161 aaPredicted RBP6.57□□□□□ -1.36
RGD2YFL047W CSN12P47130 423 aa6.57□□□□□ -1.36
RGD2YFL047W VPS25P47142 202 aa6.57□□□□□ -1.36
RGD2YFL047W SHY1P53266 389 aa6.57□□□□□ -1.36
RGD2YFL047W COQ6P53318 479 aa6.57□□□□□ -1.36
RGD2YFL047W YLR012CQ07927 99 aa6.57□□□□□ -1.36
RGD2YFL047W YOR387CQ08910 206 aa6.57□□□□□ -1.36
RGD2YFL047W YOR389WQ08912 624 aa6.57□□□□□ -1.36
RGD2YFL047W MRN1Q08925 612 aaKnown RBP RIP-Chip data6.57□□□□□ -1.36not detected
RGD2YFL047W MLH3Q12083 715 aa6.57□□□□□ -1.36
RGD2YFL047W PRC1P00729 532 aa6.56□□□□□ -1.36
RGD2YFL047W RAD7P06779 565 aa6.56□□□□□ -1.36
RGD2YFL047W DST1P07273 309 aa6.56□□□□□ -1.36
RGD2YFL047W POT1P27796 417 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36not detected
RGD2YFL047W PCF11P39081 626 aaPredicted RBP6.56□□□□□ -1.36
RGD2YFL047W PSF2P40359 213 aa6.56□□□□□ -1.36
RGD2YFL047W AYR1P40471 297 aa6.56□□□□□ -1.36
RGD2YFL047W YGR035CP53222 116 aa6.56□□□□□ -1.36
RGD2YFL047W TLG1Q03322 224 aa6.56□□□□□ -1.36
RGD2YFL047W NUT2Q06213 157 aa6.56□□□□□ -1.36
RGD2YFL047W HER1Q12276 1246 aa6.56□□□□□ -1.36
RGD2YFL047W YDR524C-BQ3E6R4 66 aa6.56□□□□□ -1.36
RGD2YFL047W TIM9O74700 87 aa6.56□□□□□ -1.36
RGD2YFL047W MET17P06106 444 aa6.56□□□□□ -1.36
RGD2YFL047W MRPL8P22353 238 aa6.56□□□□□ -1.36
RGD2YFL047W UBA1P22515 1024 aaKnown RBP6.56□□□□□ -1.36
RGD2YFL047W NUP2P32499 720 aa6.56□□□□□ -1.36
RGD2YFL047W TSA1P34760 196 aaKnown RBP6.56□□□□□ -1.36
RGD2YFL047W RPL34BP40525 121 aaKnown RBP6.56□□□□□ -1.36
RGD2YFL047W ARF3P40994 183 aaRIP-Chip data6.56□□□□□ -1.36not detected
RGD2YFL047W STB2P46679 850 aa6.56□□□□□ -1.36
RGD2YFL047W GTO1P48239 356 aa6.56□□□□□ -1.36
RGD2YFL047W YNR068CP53754 272 aa6.56□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms