RNA–Protein interactions for RNA: YER162C

RAD4, Transcript of Protein that recognizes and binds damaged DNA (with Rad23p) during NER, yeast

Gene RAD4, Length 2,265 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RAD4	YER162C	MTW1	P39731	289 aa		3.58	□□□□□ -1.84
RAD4	YER162C	SSU1	P41930	458 aa		3.58	□□□□□ -1.84
RAD4	YER162C	CIS3	P47001	227 aa		3.58	□□□□□ -1.84
RAD4	YER162C	BNA2	P47125	453 aa		3.58	□□□□□ -1.84
RAD4	YER162C	TRM112	P53738	135 aa	Predicted RBP	3.58	□□□□□ -1.84
RAD4	YER162C	GPD1	Q00055	391 aa	Known RBP	3.58	□□□□□ -1.84
RAD4	YER162C	ECM9	Q02202	377 aa		3.58	□□□□□ -1.84
RAD4	YER162C	EGD1	Q02642	157 aa	Known RBP	3.58	□□□□□ -1.84
RAD4	YER162C	HLR1	Q04429	423 aa		3.58	□□□□□ -1.84
RAD4	YER162C	ECM18	Q04623	453 aa		3.58	□□□□□ -1.84
RAD4	YER162C	RKM1	Q08961	583 aa	Predicted RBP	3.58	□□□□□ -1.84
RAD4	YER162C	TGL5	Q12043	749 aa		3.58	□□□□□ -1.84
RAD4	YER162C	PET494	P07390	489 aa	Predicted RBP	3.58	□□□□□ -1.84
RAD4	YER162C	FUS3	P16892	353 aa	Known RBP	3.58	□□□□□ -1.84
RAD4	YER162C	MRPL33	P20084	86 aa		3.58	□□□□□ -1.84
RAD4	YER162C	SYP1	P25623	870 aa	Known RBP	3.58	□□□□□ -1.84
RAD4	YER162C	MEI5	P32489	222 aa		3.58	□□□□□ -1.84
RAD4	YER162C	RVS167	P39743	482 aa	Known RBP	3.58	□□□□□ -1.84
RAD4	YER162C	MRX1	P40050	688 aa		3.58	□□□□□ -1.84
RAD4	YER162C	ABM1	P47146	123 aa		3.58	□□□□□ -1.84
RAD4	YER162C	GNP1	P48813	663 aa		3.58	□□□□□ -1.84
RAD4	YER162C	PUS2	P53167	370 aa		3.58	□□□□□ -1.84
RAD4	YER162C	ORC3	P54790	616 aa		3.58	□□□□□ -1.84
RAD4	YER162C	PIR1	Q03178	341 aa		3.58	□□□□□ -1.84
RAD4	YER162C	YAP6	Q03935	383 aa		3.58	□□□□□ -1.84
RAD4	YER162C	UFO1	Q04511	668 aa		3.58	□□□□□ -1.84
RAD4	YER162C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	3.58	□□□□□ -1.84	not detected
RAD4	YER162C	RIO1	Q12196	484 aa	Known RBP	3.58	□□□□□ -1.84
RAD4	YER162C	HRP1	Q99383	534 aa	Known RBP	3.58	□□□□□ -1.84
RAD4	YER162C	TEF1	P02994	458 aa	Known RBP	3.57	□□□□□ -1.84
RAD4	YER162C	RPS3	P05750	240 aa	Known RBP	3.57	□□□□□ -1.84
RAD4	YER162C	MTF2	P10849	440 aa		3.57	□□□□□ -1.84
RAD4	YER162C	EST1	P17214	699 aa	Predicted RBP	3.57	□□□□□ -1.84
RAD4	YER162C	HOP1	P20050	605 aa		3.57	□□□□□ -1.84
RAD4	YER162C	CLB1	P24868	471 aa		3.57	□□□□□ -1.84
RAD4	YER162C	BOS1	P25385	244 aa		3.57	□□□□□ -1.84
RAD4	YER162C	YIH1	P25637	258 aa		3.57	□□□□□ -1.84
RAD4	YER162C	DAD2	P36162	133 aa		3.57	□□□□□ -1.84
RAD4	YER162C	ALG14	P38242	237 aa		3.57	□□□□□ -1.84
RAD4	YER162C	MUP3	P38734	546 aa		3.57	□□□□□ -1.84
RAD4	YER162C	TDA3	P38758	523 aa		3.57	□□□□□ -1.84
RAD4	YER162C	DYS1	P38791	387 aa		3.57	□□□□□ -1.84
RAD4	YER162C	SAW1	P39735	261 aa		3.57	□□□□□ -1.84
RAD4	YER162C	MET18	P40469	1032 aa		3.57	□□□□□ -1.84
RAD4	YER162C	TAD1	P53065	400 aa		3.57	□□□□□ -1.84
RAD4	YER162C	DRN1	P53255	507 aa	Known RBP	3.57	□□□□□ -1.84
RAD4	YER162C	YTP1	P53584	459 aa		3.57	□□□□□ -1.84
RAD4	YER162C	SNO2	P53823	222 aa		3.57	□□□□□ -1.84
RAD4	YER162C	RPM2	Q02773	1202 aa		3.57	□□□□□ -1.84
RAD4	YER162C	UTP5	Q04177	643 aa	Known RBP	3.57	□□□□□ -1.84
RAD4	YER162C	GNT1	Q12096	491 aa		3.57	□□□□□ -1.84
RAD4	YER162C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.57	□□□□□ -1.84	not detected
RAD4	YER162C	GPM3	Q12326	303 aa		3.57	□□□□□ -1.84
RAD4	YER162C	FRE7	Q12333	620 aa		3.57	□□□□□ -1.84
RAD4	YER162C	YPR071W	Q12346	211 aa		3.57	□□□□□ -1.84
RAD4	YER162C	HTA1	P04911	132 aa	Known RBP	3.56	□□□□□ -1.84
RAD4	YER162C	HTA2	P04912	132 aa		3.56	□□□□□ -1.84
RAD4	YER162C	SWI5	P08153	709 aa		3.56	□□□□□ -1.84
RAD4	YER162C	UNG1	P12887	359 aa		3.56	□□□□□ -1.84
RAD4	YER162C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.56	□□□□□ -1.84	not detected
RAD4	YER162C	CDC15	P27636	974 aa		3.56	□□□□□ -1.84
RAD4	YER162C	PRX1	P34227	261 aa	Known RBP	3.56	□□□□□ -1.84
RAD4	YER162C	RRP3	P38712	501 aa	Known RBP	3.56	□□□□□ -1.84
RAD4	YER162C	MNL1	P38888	796 aa		3.56	□□□□□ -1.84
RAD4	YER162C	YIL077C	P40508	320 aa		3.56	□□□□□ -1.84
RAD4	YER162C	YRB2	P40517	327 aa		3.56	□□□□□ -1.84
RAD4	YER162C	ASG7	P46993	209 aa		3.56	□□□□□ -1.84
RAD4	YER162C	MIG2	P53035	382 aa		3.56	□□□□□ -1.84
RAD4	YER162C	YGR067C	P53243	804 aa		3.56	□□□□□ -1.84
RAD4	YER162C	IPI3	P53877	555 aa		3.56	□□□□□ -1.84
RAD4	YER162C	SNO4	Q04902	237 aa		3.56	□□□□□ -1.84
RAD4	YER162C	BCP1	Q06338	283 aa		3.56	□□□□□ -1.84
RAD4	YER162C	HDA2	Q06629	674 aa		3.56	□□□□□ -1.84
RAD4	YER162C	LUC7	Q07508	261 aa	Predicted RBP	3.56	□□□□□ -1.84
RAD4	YER162C	TLG2	Q08144	397 aa		3.56	□□□□□ -1.84
RAD4	YER162C	HSP33	Q08914	237 aa	Known RBP	3.56	□□□□□ -1.84
RAD4	YER162C	HSP32	Q08992	237 aa		3.56	□□□□□ -1.84
RAD4	YER162C	IOC2	Q12072	812 aa		3.56	□□□□□ -1.84
RAD4	YER162C	CHS5	Q12114	671 aa	Known RBP	3.56	□□□□□ -1.84
RAD4	YER162C	ARG80	P07249	177 aa		3.56	□□□□□ -1.84
RAD4	YER162C	RPS21A	P0C0V8	87 aa	Known RBP	3.56	□□□□□ -1.84
RAD4	YER162C	SPT15	P13393	240 aa	Known RBP	3.56	□□□□□ -1.84
RAD4	YER162C	NCP1	P16603	691 aa	Known RBP	3.56	□□□□□ -1.84
RAD4	YER162C	FAR1	P21268	830 aa		3.56	□□□□□ -1.84
RAD4	YER162C	RDS1	P25611	832 aa		3.56	□□□□□ -1.84
RAD4	YER162C	CWP1	P28319	239 aa		3.56	□□□□□ -1.84
RAD4	YER162C	LIP5	P32875	414 aa		3.56	□□□□□ -1.84
RAD4	YER162C	SRB2	P34162	210 aa		3.56	□□□□□ -1.84
RAD4	YER162C	YKL107W	P34251	309 aa		3.56	□□□□□ -1.84
RAD4	YER162C	KAP104	P38217	918 aa	Known RBP	3.56	□□□□□ -1.84
RAD4	YER162C	IFA38	P38286	347 aa		3.56	□□□□□ -1.84
RAD4	YER162C	SIC1	P38634	284 aa		3.56	□□□□□ -1.84
RAD4	YER162C	CCT5	P40413	562 aa	Known RBP	3.56	□□□□□ -1.84
RAD4	YER162C	YGL176C	P46945	554 aa		3.56	□□□□□ -1.84
RAD4	YER162C	SNG1	P46950	547 aa		3.56	□□□□□ -1.84
RAD4	YER162C	UBX6	P47049	396 aa		3.56	□□□□□ -1.84
RAD4	YER162C	PEX31	P53203	462 aa		3.56	□□□□□ -1.84
RAD4	YER162C	ABZ2	Q03266	374 aa		3.56	□□□□□ -1.84
RAD4	YER162C	RPC11	Q04307	110 aa	Predicted RBP	3.56	□□□□□ -1.84
RAD4	YER162C	YLR297W	Q05899	129 aa		3.56	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms