RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeast

Gene UBC6, Length 753 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC6	YER100W	MLC1	P53141	149 aa		5.1	□□□□□ -1.59
UBC6	YER100W	TIM44	Q01852	431 aa		5.1	□□□□□ -1.59
UBC6	YER100W	YMR160W	Q03823	816 aa		5.1	□□□□□ -1.59
UBC6	YER100W	MGR3	Q04472	501 aa		5.1	□□□□□ -1.59
UBC6	YER100W	ARO10	Q06408	635 aa		5.1	□□□□□ -1.59
UBC6	YER100W	REX3	Q12090	404 aa		5.1	□□□□□ -1.59
UBC6	YER100W	RTC1	Q08281	1341 aa		5.09	□□□□□ -1.59
UBC6	YER100W	STF1	P01098	86 aa		5.09	□□□□□ -1.59
UBC6	YER100W	CHO1	P08456	276 aa		5.09	□□□□□ -1.59
UBC6	YER100W	SPS4	P09937	338 aa		5.09	□□□□□ -1.59
UBC6	YER100W	RAP1	P11938	827 aa		5.09	□□□□□ -1.59
UBC6	YER100W	PRP2	P20095	876 aa	Predicted RBP	5.09	□□□□□ -1.59
UBC6	YER100W	CLB2	P24869	491 aa		5.09	□□□□□ -1.59
UBC6	YER100W	SAC1	P32368	623 aa	Known RBP	5.09	□□□□□ -1.59
UBC6	YER100W	YEL043W	P32618	956 aa		5.09	□□□□□ -1.59
UBC6	YER100W	GYP6	P32806	458 aa		5.09	□□□□□ -1.59
UBC6	YER100W	RPL32	P38061	130 aa	Known RBP	5.09	□□□□□ -1.59
UBC6	YER100W	DBP8	P38719	431 aa		5.09	□□□□□ -1.59
UBC6	YER100W	EXO1	P39875	702 aa		5.09	□□□□□ -1.59
UBC6	YER100W	ALK1	P43633	760 aa	Known RBP	5.09	□□□□□ -1.59
UBC6	YER100W	YPR003C	P53394	754 aa		5.09	□□□□□ -1.59
UBC6	YER100W	SEC5	P89102	971 aa		5.09	□□□□□ -1.59
UBC6	YER100W	TOF2	Q02208	771 aa		5.09	□□□□□ -1.59
UBC6	YER100W	MUK1	Q02866	612 aa		5.09	□□□□□ -1.59
UBC6	YER100W	ACL4	Q03771	387 aa		5.09	□□□□□ -1.59
UBC6	YER100W	EMI2	Q04409	500 aa	Known RBP	5.09	□□□□□ -1.59
UBC6	YER100W	HEL2	Q05580	639 aa	Known RBP	5.09	□□□□□ -1.59
UBC6	YER100W	YOL159C	Q08300	171 aa		5.09	□□□□□ -1.59
UBC6	YER100W	APL5	Q08951	932 aa	Known RBP	5.09	□□□□□ -1.59
UBC6	YER100W	ARG81	P05085	880 aa		5.08	□□□□□ -1.6
UBC6	YER100W	CBP1	P07252	654 aa		5.08	□□□□□ -1.6
UBC6	YER100W	MAK32	P23060	363 aa		5.08	□□□□□ -1.6
UBC6	YER100W	PHO84	P25297	587 aa	Known RBP	5.08	□□□□□ -1.6
UBC6	YER100W	GSY2	P27472	705 aa		5.08	□□□□□ -1.6
UBC6	YER100W	RAD14	P28519	371 aa		5.08	□□□□□ -1.6
UBC6	YER100W	SMI1	P32566	505 aa		5.08	□□□□□ -1.6
UBC6	YER100W	MIA40	P36046	403 aa		5.08	□□□□□ -1.6
UBC6	YER100W	MEP1	P40260	492 aa		5.08	□□□□□ -1.6
UBC6	YER100W	SLG1	P54867	378 aa		5.08	□□□□□ -1.6
UBC6	YER100W	GIS1	Q03833	894 aa		5.08	□□□□□ -1.6
UBC6	YER100W	COQ9	Q05779	260 aa		5.08	□□□□□ -1.6
UBC6	YER100W	RRP9	Q06506	573 aa	Known RBP	5.08	□□□□□ -1.6
UBC6	YER100W	CFT2	Q12102	859 aa	Predicted RBP	5.08	□□□□□ -1.6
UBC6	YER100W	RPL6B	P05739	176 aa	Known RBP	5.07	□□□□□ -1.6
UBC6	YER100W	GPH1	P06738	902 aa	Known RBP	5.07	□□□□□ -1.6
UBC6	YER100W	PUT2	P07275	575 aa		5.07	□□□□□ -1.6
UBC6	YER100W	SUI2	P20459	304 aa	Known RBP	5.07	□□□□□ -1.6
UBC6	YER100W	PPH22	P23595	377 aa		5.07	□□□□□ -1.6
UBC6	YER100W	GAC1	P28006	793 aa		5.07	□□□□□ -1.6
UBC6	YER100W	RPC34	P32910	317 aa		5.07	□□□□□ -1.6
UBC6	YER100W	RIX1	P38883	763 aa	Predicted RBP	5.07	□□□□□ -1.6
UBC6	YER100W	ATF1	P40353	525 aa		5.07	□□□□□ -1.6
UBC6	YER100W	SDS3	P40505	327 aa		5.07	□□□□□ -1.6
UBC6	YER100W	NAS2	P40555	220 aa		5.07	□□□□□ -1.6
UBC6	YER100W	FET5	P43561	622 aa		5.07	□□□□□ -1.6
UBC6	YER100W	ATG27	P46989	271 aa		5.07	□□□□□ -1.6
UBC6	YER100W	CAF130	P53280	1122 aa	Predicted RBP	5.07	□□□□□ -1.6
UBC6	YER100W	CTF4	Q01454	927 aa		5.07	□□□□□ -1.6
UBC6	YER100W	RPL6A	Q02326	176 aa	Known RBP	5.07	□□□□□ -1.6
UBC6	YER100W	RHO2	P06781	192 aa		5.06	□□□□□ -1.6
UBC6	YER100W	ADE5,7	P07244	802 aa	Known RBP	5.06	□□□□□ -1.6
UBC6	YER100W	HEM1	P09950	548 aa	Predicted RBP	5.06	□□□□□ -1.6
UBC6	YER100W	SPO7	P18410	259 aa		5.06	□□□□□ -1.6
UBC6	YER100W	CLN1	P20437	546 aa		5.06	□□□□□ -1.6
UBC6	YER100W	TKL1	P23254	680 aa	Known RBP	5.06	□□□□□ -1.6
UBC6	YER100W	SAT4	P25333	603 aa	Known RBP	5.06	□□□□□ -1.6
UBC6	YER100W	MTR2	P34232	184 aa	Known RBP	5.06	□□□□□ -1.6
UBC6	YER100W	IMD2	P38697	523 aa	Known RBP	5.06	□□□□□ -1.6
UBC6	YER100W	GND1	P38720	489 aa	Known RBP	5.06	□□□□□ -1.6
UBC6	YER100W	ULP2	P40537	1034 aa	Predicted RBP	5.06	□□□□□ -1.6
UBC6	YER100W	YJL132W	P47014	750 aa		5.06	□□□□□ -1.6
UBC6	YER100W	AIM22	P47051	409 aa		5.06	□□□□□ -1.6
UBC6	YER100W	ECM27	P47144	725 aa		5.06	□□□□□ -1.6
UBC6	YER100W	MRK1	P50873	501 aa		5.06	□□□□□ -1.6
UBC6	YER100W	NCS2	P53923	493 aa	Predicted RBP	5.06	□□□□□ -1.6
UBC6	YER100W	DBP9	Q06218	594 aa	Known RBP	5.06	□□□□□ -1.6
UBC6	YER100W	RPS10A	Q08745	105 aa	Predicted RBP	5.06	□□□□□ -1.6
UBC6	YER100W	VPS54	Q12071	889 aa		5.06	□□□□□ -1.6
UBC6	YER100W	YLR049C	Q12110	428 aa		5.06	□□□□□ -1.6
UBC6	YER100W	BRR1	Q99177	341 aa	Predicted RBP	5.06	□□□□□ -1.6
UBC6	YER100W	GLT1	Q12680	2145 aa	Known RBP	5.06	□□□□□ -1.6
UBC6	YER100W	LPD1	P09624	499 aa	Known RBP	5.05	□□□□□ -1.6
UBC6	YER100W	URA4	P20051	364 aa		5.05	□□□□□ -1.6
UBC6	YER100W	KIN3	P22209	435 aa		5.05	□□□□□ -1.6
UBC6	YER100W	GEX1	P25596	615 aa		5.05	□□□□□ -1.6
UBC6	YER100W	YIM1	P28625	365 aa		5.05	□□□□□ -1.6
UBC6	YER100W	SPC110	P32380	944 aa		5.05	□□□□□ -1.6
UBC6	YER100W	EMP70	P32802	667 aa		5.05	□□□□□ -1.6
UBC6	YER100W	ADH5	P38113	351 aa	Known RBP	5.05	□□□□□ -1.6
UBC6	YER100W	YSW1	P38280	609 aa		5.05	□□□□□ -1.6
UBC6	YER100W	ARP1	P38696	384 aa		5.05	□□□□□ -1.6
UBC6	YER100W	CHS7	P38843	316 aa		5.05	□□□□□ -1.6
UBC6	YER100W	SER3	P40054	469 aa		5.05	□□□□□ -1.6
UBC6	YER100W	RPS10B	P46784	105 aa	Known RBP	5.05	□□□□□ -1.6
UBC6	YER100W	MDE1	P47095	244 aa		5.05	□□□□□ -1.6
UBC6	YER100W	LYS20	P48570	428 aa	Known RBP	5.05	□□□□□ -1.6
UBC6	YER100W	PYK2	P52489	506 aa	Known RBP	5.05	□□□□□ -1.6
UBC6	YER100W	ALT2	P52892	507 aa		5.05	□□□□□ -1.6
UBC6	YER100W	YGL108C	P53139	140 aa		5.05	□□□□□ -1.6
UBC6	YER100W	YGR126W	P53274	230 aa		5.05	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms