RNA–Protein interactions for RNA: YDR358W

GGA1, Transcript of Golgi-localized protein with homology to gamma-adaptin, yeast

Gene GGA1, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GGA1	YDR358W	Q0010	Q9ZZX9	128 aa		4.6	□□□□□ -1.67
GGA1	YDR358W	RPL31B	P0C2H9	113 aa	Known RBP	4.59	□□□□□ -1.67
GGA1	YDR358W	SPO7	P18410	259 aa		4.59	□□□□□ -1.67
GGA1	YDR358W	PTC6	P25646	442 aa		4.59	□□□□□ -1.67
GGA1	YDR358W	RRP1	P35178	278 aa	Predicted RBP	4.59	□□□□□ -1.67
GGA1	YDR358W	GLG1	P36143	616 aa		4.59	□□□□□ -1.67
GGA1	YDR358W	ADE17	P38009	592 aa	Known RBP	4.59	□□□□□ -1.67
GGA1	YDR358W	ADH5	P38113	351 aa	Known RBP	4.59	□□□□□ -1.67
GGA1	YDR358W	CBR1	P38626	284 aa	Known RBP	4.59	□□□□□ -1.67
GGA1	YDR358W	CHS7	P38843	316 aa		4.59	□□□□□ -1.67
GGA1	YDR358W	OPT1	P40897	799 aa		4.59	□□□□□ -1.67
GGA1	YDR358W	STU2	P46675	888 aa		4.59	□□□□□ -1.67
GGA1	YDR358W	CAF130	P53280	1122 aa	Predicted RBP	4.59	□□□□□ -1.67
GGA1	YDR358W	SMX3	P54999	86 aa	Predicted RBP	4.59	□□□□□ -1.67
GGA1	YDR358W	YMR111C	Q04461	462 aa	Predicted RBP	4.59	□□□□□ -1.67
GGA1	YDR358W	SPH1	Q06160	661 aa		4.59	□□□□□ -1.67
GGA1	YDR358W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.59	□□□□□ -1.67
GGA1	YDR358W	DAL80	P26343	269 aa		4.58	□□□□□ -1.68
GGA1	YDR358W	PPS1	P38148	807 aa		4.58	□□□□□ -1.68
GGA1	YDR358W	TSC10	P38342	320 aa		4.58	□□□□□ -1.68
GGA1	YDR358W	CIN4	P39110	191 aa		4.58	□□□□□ -1.68
GGA1	YDR358W	YIL089W	P40500	205 aa		4.58	□□□□□ -1.68
GGA1	YDR358W	CHS6	P40955	746 aa		4.58	□□□□□ -1.68
GGA1	YDR358W	YJL132W	P47014	750 aa		4.58	□□□□□ -1.68
GGA1	YDR358W	SHE4	P51534	789 aa		4.58	□□□□□ -1.68
GGA1	YDR358W	ERG26	P53199	349 aa	Known RBP	4.58	□□□□□ -1.68
GGA1	YDR358W	SLI1	P53304	468 aa		4.58	□□□□□ -1.68
GGA1	YDR358W	YNR068C	P53754	272 aa		4.58	□□□□□ -1.68
GGA1	YDR358W	RHO5	P53879	331 aa	Known RBP	4.58	□□□□□ -1.68
GGA1	YDR358W	YNL058C	P53947	316 aa		4.58	□□□□□ -1.68
GGA1	YDR358W	TAP42	Q04372	366 aa		4.58	□□□□□ -1.68
GGA1	YDR358W	TEN1	Q07921	160 aa		4.58	□□□□□ -1.68
GGA1	YDR358W	SLK19	Q08581	821 aa	Known RBP	4.58	□□□□□ -1.68
GGA1	YDR358W	LEA1	Q08963	238 aa	Predicted RBP	4.58	□□□□□ -1.68
GGA1	YDR358W	MDY2	Q12285	212 aa		4.58	□□□□□ -1.68
GGA1	YDR358W	MDM20	Q12387	796 aa	Known RBP	4.58	□□□□□ -1.68
GGA1	YDR358W	AHA1	Q12449	350 aa	Known RBP	4.58	□□□□□ -1.68
GGA1	YDR358W	PET111	P08468	800 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	SPS4	P09937	338 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	URA4	P20051	364 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	RAD14	P28519	371 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	SSE1	P32589	693 aa	Known RBP	4.57	□□□□□ -1.68
GGA1	YDR358W	EBP2	P36049	427 aa	Known RBP	4.57	□□□□□ -1.68
GGA1	YDR358W	SUL1	P38359	859 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	EPL1	P43572	832 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	PDR16	P53860	351 aa	Known RBP	4.57	□□□□□ -1.68
GGA1	YDR358W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
GGA1	YDR358W	RPN9	Q04062	393 aa	Known RBP	4.57	□□□□□ -1.68
GGA1	YDR358W	YMR130W	Q04223	302 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	PUS9	Q12069	462 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	NBL1	Q3E7Y6	73 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	MRP2	P10663	115 aa	Predicted RBP	4.57	□□□□□ -1.68
GGA1	YDR358W	DAP2	P18962	818 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	BUD5	P25300	642 aa	Predicted RBP	4.57	□□□□□ -1.68
GGA1	YDR358W	AFG1	P32317	509 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	SUR1	P33300	382 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	RPL32	P38061	130 aa	Known RBP	4.57	□□□□□ -1.68
GGA1	YDR358W	ARA1	P38115	344 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	DBP8	P38719	431 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	OSW5	P40219	148 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	YTA12	P40341	825 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	YJL107C	P42947	387 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	ERV25	P54837	211 aa	Known RBP	4.57	□□□□□ -1.68
GGA1	YDR358W	TOF2	Q02208	771 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	YMR178W	Q03219	274 aa	Known RBP	4.57	□□□□□ -1.68
GGA1	YDR358W	HRD3	Q05787	833 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	ARO10	Q06408	635 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	HBT1	Q07653	1046 aa	Known RBP	4.57	□□□□□ -1.68
GGA1	YDR358W	RTT109	Q07794	436 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	PML1	Q07930	204 aa	Predicted RBP	4.57	□□□□□ -1.68
GGA1	YDR358W	SIL1	Q08199	421 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	YOL073C	Q08232	322 aa		4.57	□□□□□ -1.68
GGA1	YDR358W	ARG81	P05085	880 aa		4.56	□□□□□ -1.68
GGA1	YDR358W	CLN1	P20437	546 aa		4.56	□□□□□ -1.68
GGA1	YDR358W	NIP1	P32497	812 aa	Known RBP	4.56	□□□□□ -1.68
GGA1	YDR358W	SRB2	P34162	210 aa		4.56	□□□□□ -1.68
GGA1	YDR358W	MMS4	P38257	691 aa		4.56	□□□□□ -1.68
GGA1	YDR358W	YHL017W	P38745	532 aa		4.56	□□□□□ -1.68
GGA1	YDR358W	PCL5	P38794	229 aa		4.56	□□□□□ -1.68
GGA1	YDR358W	RIX1	P38883	763 aa	Predicted RBP	4.56	□□□□□ -1.68
GGA1	YDR358W	YHR218W	P38899	603 aa		4.56	□□□□□ -1.68
GGA1	YDR358W	SER3	P40054	469 aa		4.56	□□□□□ -1.68
GGA1	YDR358W	CUE3	P53137	624 aa	Known RBP	4.56	□□□□□ -1.68
GGA1	YDR358W	CPR8	P53728	308 aa		4.56	□□□□□ -1.68
GGA1	YDR358W	PRO2	P54885	456 aa	Known RBP	4.56	□□□□□ -1.68
GGA1	YDR358W	YMR160W	Q03823	816 aa		4.56	□□□□□ -1.68
GGA1	YDR358W	EMI2	Q04409	500 aa	Known RBP	4.56	□□□□□ -1.68
GGA1	YDR358W	APL5	Q08951	932 aa	Known RBP	4.56	□□□□□ -1.68
GGA1	YDR358W	PCL8	Q08966	492 aa		4.56	□□□□□ -1.68
GGA1	YDR358W	INO80	P53115	1489 aa		4.55	□□□□□ -1.68
GGA1	YDR358W	GAC1	P28006	793 aa		4.55	□□□□□ -1.68
GGA1	YDR358W	YIM1	P28625	365 aa		4.55	□□□□□ -1.68
GGA1	YDR358W	SPC110	P32380	944 aa		4.55	□□□□□ -1.68
GGA1	YDR358W	MRPL4	P36517	319 aa		4.55	□□□□□ -1.68
GGA1	YDR358W	IMD2	P38697	523 aa	Known RBP	4.55	□□□□□ -1.68
GGA1	YDR358W	BDH2	P39713	417 aa		4.55	□□□□□ -1.68
GGA1	YDR358W	YFR016C	P43597	1233 aa	Known RBP	4.55	□□□□□ -1.68
GGA1	YDR358W	CWC22	P53333	577 aa	Known RBP	4.55	□□□□□ -1.68
GGA1	YDR358W	ARP5	P53946	755 aa		4.55	□□□□□ -1.68
GGA1	YDR358W	NOP6	Q07623	225 aa	Known RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 21 ms