RNA–Protein interactions for RNA: YDR335W

MSN5, Transcript of Karyopherin, yeastyeast

Gene MSN5, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN5YDR335W SNL1P40548 159 aa1.37□□□□□ -2.19
MSN5YDR335W YJL118WP47022 219 aa1.37□□□□□ -2.19
MSN5YDR335W HXT16P47185 567 aa1.37□□□□□ -2.19
MSN5YDR335W SHE4P51534 789 aa1.37□□□□□ -2.19
MSN5YDR335W DIA3P52290 468 aa1.37□□□□□ -2.19
MSN5YDR335W YGL185CP53100 379 aa1.37□□□□□ -2.19
MSN5YDR335W ROG1P53118 685 aa1.37□□□□□ -2.19
MSN5YDR335W YGR066CP53242 292 aa1.37□□□□□ -2.19
MSN5YDR335W PIL1P53252 339 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W RET3P53600 189 aa1.37□□□□□ -2.19
MSN5YDR335W YNL146WP53906 100 aa1.37□□□□□ -2.19
MSN5YDR335W YNL134CP53912 376 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W OCA2P53949 197 aa1.37□□□□□ -2.19
MSN5YDR335W YDR179W-AQ03983 463 aa1.37□□□□□ -2.19
MSN5YDR335W CDD1Q06549 142 aa1.37□□□□□ -2.19
MSN5YDR335W ARR2Q06597 130 aa1.37□□□□□ -2.19
MSN5YDR335W CRD1Q07560 283 aa1.37□□□□□ -2.19
MSN5YDR335W RUD3Q12234 484 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W PGA3Q12746 312 aaKnown RBP1.37□□□□□ -2.19
MSN5YDR335W YPT6Q99260 215 aa1.37□□□□□ -2.19
MSN5YDR335W ILV2P07342 687 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W TAL1P15019 335 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W PRP4P20053 465 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W VPS1P21576 704 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W KIN82P25341 720 aa1.36□□□□□ -2.19
MSN5YDR335W YIH1P25637 258 aa1.36□□□□□ -2.19
MSN5YDR335W AFG1P32317 509 aa1.36□□□□□ -2.19
MSN5YDR335W SUA5P32579 426 aa1.36□□□□□ -2.19
MSN5YDR335W SRB2P34162 210 aa1.36□□□□□ -2.19
MSN5YDR335W TOM71P38825 639 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W ELO3P40319 345 aa1.36□□□□□ -2.19
MSN5YDR335W YJL070CP40361 888 aa1.36□□□□□ -2.19
MSN5YDR335W RPN11P43588 306 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W DLD2P46681 530 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W MLC1P53141 149 aa1.36□□□□□ -2.19
MSN5YDR335W EGD1Q02642 157 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W PFA5Q03289 374 aa1.36□□□□□ -2.19
MSN5YDR335W YMR130WQ04223 302 aa1.36□□□□□ -2.19
MSN5YDR335W RRN11Q04712 507 aa1.36□□□□□ -2.19
MSN5YDR335W BUR2Q05949 395 aa1.36□□□□□ -2.19
MSN5YDR335W RXT3Q07458 294 aa1.36□□□□□ -2.19
MSN5YDR335W DSE3Q08729 430 aa1.36□□□□□ -2.19
MSN5YDR335W RLM1Q12224 676 aa1.36□□□□□ -2.19
MSN5YDR335W APC1P53886 1748 aa1.36□□□□□ -2.19
MSN5YDR335W HIP1P06775 603 aa1.36□□□□□ -2.19
MSN5YDR335W PET111P08468 800 aa1.36□□□□□ -2.19
MSN5YDR335W MRP13P12686 339 aa1.36□□□□□ -2.19
MSN5YDR335W YPK1P12688 680 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W ARO3P14843 370 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W BUD5P25300 642 aaPredicted RBP1.36□□□□□ -2.19
MSN5YDR335W GID7P25569 745 aa1.36□□□□□ -2.19
MSN5YDR335W RPL5P26321 297 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W PET127P32606 800 aa1.36□□□□□ -2.19
MSN5YDR335W YEL043WP32618 956 aa1.36□□□□□ -2.19
MSN5YDR335W EMP70P32802 667 aa1.36□□□□□ -2.19
MSN5YDR335W NPL6P32832 435 aa1.36□□□□□ -2.19
MSN5YDR335W YKR078WP36158 585 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W PCH2P38126 564 aa1.36□□□□□ -2.19
MSN5YDR335W THI2P38141 450 aa1.36□□□□□ -2.19
MSN5YDR335W GCD10P41814 478 aa1.36□□□□□ -2.19
MSN5YDR335W LAM5P43560 674 aa1.36□□□□□ -2.19
MSN5YDR335W BNA6P43619 295 aa1.36□□□□□ -2.19
MSN5YDR335W ALK1P43633 760 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W CTK2P46962 323 aa1.36□□□□□ -2.19
MSN5YDR335W ECL1P48235 211 aa1.36□□□□□ -2.19
MSN5YDR335W YGR079WP53249 370 aa1.36□□□□□ -2.19
MSN5YDR335W SNO2P53823 222 aa1.36□□□□□ -2.19
MSN5YDR335W NRG1Q03125 231 aa1.36□□□□□ -2.19
MSN5YDR335W MTG1Q03151 367 aaPredicted RBP1.36□□□□□ -2.19
MSN5YDR335W MUS81Q04149 632 aaPredicted RBP1.36□□□□□ -2.19
MSN5YDR335W SMA2Q04658 369 aa1.36□□□□□ -2.19
MSN5YDR335W TSR1Q07381 788 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W YEH1Q07804 573 aa1.36□□□□□ -2.19
MSN5YDR335W YOR389WQ08912 624 aa1.36□□□□□ -2.19
MSN5YDR335W AEP3Q12089 606 aa1.36□□□□□ -2.19
MSN5YDR335W SWT1Q12104 458 aa1.36□□□□□ -2.19
MSN5YDR335W CHS5Q12114 671 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W COX1P00401 534 aa1.36□□□□□ -2.19
MSN5YDR335W GAL10P04397 699 aa1.36□□□□□ -2.19
MSN5YDR335W RPS13P05756 151 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W SAM1P10659 382 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W FUS3P16892 353 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W ACO1P19414 778 aaKnown RBP RIP-Chip data1.36□□□□□ -2.19not detected
MSN5YDR335W MRPL25P23369 157 aa1.36□□□□□ -2.19
MSN5YDR335W EMC1P25574 760 aa1.36□□□□□ -2.19
MSN5YDR335W URA7P28274 579 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W BCS1P32839 456 aa1.36□□□□□ -2.19
MSN5YDR335W YME2P32843 850 aa1.36□□□□□ -2.19
MSN5YDR335W CTF13P35203 478 aa1.36□□□□□ -2.19
MSN5YDR335W DEF1P35732 738 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W CMC1P36064 111 aa1.36□□□□□ -2.19
MSN5YDR335W TCD2P36101 447 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W GLG1P36143 616 aa1.36□□□□□ -2.19
MSN5YDR335W MNN2P38069 597 aa1.36□□□□□ -2.19
MSN5YDR335W ARA1P38115 344 aa1.36□□□□□ -2.19
MSN5YDR335W MAL32P38158 584 aa1.36□□□□□ -2.19
MSN5YDR335W SLM4P38247 162 aa1.36□□□□□ -2.19
MSN5YDR335W SPP381P38282 291 aaPredicted RBP1.36□□□□□ -2.19
MSN5YDR335W MIP6P38760 659 aaKnown RBP1.36□□□□□ -2.19
MSN5YDR335W PEX18P38855 283 aa1.36□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms