RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C SUI2P20459 304 aaKnown RBP2.81□□□□□ -1.96
SNU56YDR240C PRE8P23639 250 aa2.81□□□□□ -1.96
SNU56YDR240C BOS1P25385 244 aa2.81□□□□□ -1.96
SNU56YDR240C PUP3P25451 205 aaKnown RBP2.81□□□□□ -1.96
SNU56YDR240C YBL055CP34220 418 aaPredicted RBP2.81□□□□□ -1.96
SNU56YDR240C SWH1P35845 1188 aa2.81□□□□□ -1.96
SNU56YDR240C RRN3P36070 627 aa2.81□□□□□ -1.96
SNU56YDR240C MTC4P38335 694 aaKnown RBP2.81□□□□□ -1.96
SNU56YDR240C PTR3P43606 678 aa2.81□□□□□ -1.96
SNU56YDR240C APT1P49435 187 aaKnown RBP2.81□□□□□ -1.96
SNU56YDR240C BNA5Q05979 453 aa2.81□□□□□ -1.96
SNU56YDR240C YDL009CQ12210 107 aa2.81□□□□□ -1.96
SNU56YDR240C AYT1Q12226 474 aa2.81□□□□□ -1.96
SNU56YDR240C CDC24P11433 854 aaPredicted RBP2.8□□□□□ -1.96
SNU56YDR240C SAN1P22470 610 aa2.8□□□□□ -1.96
SNU56YDR240C SGF29P25554 259 aa2.8□□□□□ -1.96
SNU56YDR240C SYN8P31377 255 aa2.8□□□□□ -1.96
SNU56YDR240C ATS1P31386 333 aa2.8□□□□□ -1.96
SNU56YDR240C OSH3P38713 996 aaKnown RBP2.8□□□□□ -1.96
SNU56YDR240C VPS52P39904 641 aa2.8□□□□□ -1.96
SNU56YDR240C YJR154WP47181 346 aa2.8□□□□□ -1.96
SNU56YDR240C DUG3P53871 357 aa2.8□□□□□ -1.96
SNU56YDR240C SHR3Q02774 210 aa2.8□□□□□ -1.96
SNU56YDR240C YCR007CP25354 239 aa2.79□□□□□ -1.96
SNU56YDR240C PWP2P25635 923 aaKnown RBP2.79□□□□□ -1.96
SNU56YDR240C VPS24P36095 224 aaKnown RBP2.79□□□□□ -1.96
SNU56YDR240C ICS2P38284 255 aa2.79□□□□□ -1.96
SNU56YDR240C PCA1P38360 1216 aa2.79□□□□□ -1.96
SNU56YDR240C NPR2P39923 615 aa2.79□□□□□ -1.96
SNU56YDR240C SNG1P46950 547 aa2.79□□□□□ -1.96
SNU56YDR240C CBK1P53894 756 aa2.79□□□□□ -1.96
SNU56YDR240C SYO1Q07395 620 aa2.79□□□□□ -1.96
SNU56YDR240C ENT4Q07872 247 aa2.79□□□□□ -1.96
SNU56YDR240C YPL272CQ08984 517 aa2.79□□□□□ -1.96
SNU56YDR240C MF(ALPHA)1P01149 165 aa2.78□□□□□ -1.96
SNU56YDR240C HEM2P05373 342 aa2.78□□□□□ -1.96
SNU56YDR240C FUM1P08417 488 aaKnown RBP2.78□□□□□ -1.96
SNU56YDR240C PMR1P13586 950 aa2.78□□□□□ -1.96
SNU56YDR240C IMG1P25626 169 aa2.78□□□□□ -1.96
SNU56YDR240C PMU1P36069 295 aa2.78□□□□□ -1.96
SNU56YDR240C RPL32P38061 130 aaKnown RBP2.78□□□□□ -1.96
SNU56YDR240C YHR210CP38893 341 aa2.78□□□□□ -1.96
SNU56YDR240C CIN4P39110 191 aa2.78□□□□□ -1.96
SNU56YDR240C YGR126WP53274 230 aa2.78□□□□□ -1.96
SNU56YDR240C BSC5P53755 489 aa2.78□□□□□ -1.96
SNU56YDR240C MSC1Q03104 513 aa2.78□□□□□ -1.96
SNU56YDR240C SKM1Q12469 655 aa2.78□□□□□ -1.96
SNU56YDR240C SGV1P23293 657 aaKnown RBP2.77□□□□□ -1.97
SNU56YDR240C PUT3P25502 979 aaPredicted RBP2.77□□□□□ -1.97
SNU56YDR240C SSE2P32590 693 aaKnown RBP2.77□□□□□ -1.97
SNU56YDR240C TIF3P34167 436 aaKnown RBP2.77□□□□□ -1.97
SNU56YDR240C TUL1P36096 758 aa2.77□□□□□ -1.97
SNU56YDR240C MAL33P38157 468 aa2.77□□□□□ -1.97
SNU56YDR240C ALG8P40351 577 aa2.77□□□□□ -1.97
SNU56YDR240C MSO1P53604 210 aaKnown RBP2.77□□□□□ -1.97
SNU56YDR240C HEL2Q05580 639 aaKnown RBP2.77□□□□□ -1.97
SNU56YDR240C MRPL51Q06090 140 aaPredicted RBP2.77□□□□□ -1.97
SNU56YDR240C VPS74Q06385 345 aa2.77□□□□□ -1.97
SNU56YDR240C YOR365CQ08844 703 aa2.77□□□□□ -1.97
SNU56YDR240C ARD1P07347 238 aaPredicted RBP2.77□□□□□ -1.97
SNU56YDR240C LPD1P09624 499 aaKnown RBP2.77□□□□□ -1.97
SNU56YDR240C EXO70P19658 623 aa2.77□□□□□ -1.97
SNU56YDR240C RER1P25560 188 aa2.77□□□□□ -1.97
SNU56YDR240C LDB16P25587 256 aa2.77□□□□□ -1.97
SNU56YDR240C YIH1P25637 258 aa2.77□□□□□ -1.97
SNU56YDR240C YBR144CP34215 104 aa2.77□□□□□ -1.97
SNU56YDR240C AUR1P36107 401 aaPredicted RBP2.77□□□□□ -1.97
SNU56YDR240C MRPL4P36517 319 aa2.77□□□□□ -1.97
SNU56YDR240C SHO1P40073 367 aa2.77□□□□□ -1.97
SNU56YDR240C SCD6P45978 349 aaKnown RBP RIP-Chip data2.77□□□□□ -1.97not detected
SNU56YDR240C YJR008WP47085 338 aa2.77□□□□□ -1.97
SNU56YDR240C LYS4P49367 693 aaPredicted RBP2.77□□□□□ -1.97
SNU56YDR240C YML131WQ03102 365 aa2.77□□□□□ -1.97
SNU56YDR240C SLD5Q03406 294 aa2.77□□□□□ -1.97
SNU56YDR240C RAD30Q04049 632 aa2.77□□□□□ -1.97
SNU56YDR240C BUD22Q04347 519 aaKnown RBP2.77□□□□□ -1.97
SNU56YDR240C HNT3Q08702 217 aa2.77□□□□□ -1.97
SNU56YDR240C NCE102Q12207 173 aaRIP-Chip data2.77□□□□□ -1.97not detected
SNU56YDR240C LSP1Q12230 341 aaKnown RBP2.77□□□□□ -1.97
SNU56YDR240C YCL021W-AQ96VH3 125 aa2.77□□□□□ -1.97
SNU56YDR240C RPL19AP0CX82 189 aaKnown RBP2.76□□□□□ -1.97
SNU56YDR240C RPL19BP0CX83 189 aaPredicted RBP2.76□□□□□ -1.97
SNU56YDR240C KGD1P20967 1014 aaKnown RBP2.76□□□□□ -1.97
SNU56YDR240C DSD1P53095 428 aa2.76□□□□□ -1.97
SNU56YDR240C RLI1Q03195 608 aaKnown RBP2.76□□□□□ -1.97
SNU56YDR240C LUC7Q07508 261 aaPredicted RBP2.76□□□□□ -1.97
SNU56YDR240C FMP40Q08968 688 aaPredicted RBP2.76□□□□□ -1.97
SNU56YDR240C FRE1P32791 686 aa2.75□□□□□ -1.97
SNU56YDR240C YEL068CP39977 110 aa2.75□□□□□ -1.97
SNU56YDR240C BUD32P53323 261 aa2.75□□□□□ -1.97
SNU56YDR240C YSA1Q01976 231 aa2.75□□□□□ -1.97
SNU56YDR240C IRC15Q02733 499 aa2.75□□□□□ -1.97
SNU56YDR240C IVY1Q04934 453 aa2.75□□□□□ -1.97
SNU56YDR240C OPY2Q06810 360 aa2.75□□□□□ -1.97
SNU56YDR240C SUC2P00724 532 aa2.74□□□□□ -1.97
SNU56YDR240C RNA14P25298 677 aaKnown RBP2.74□□□□□ -1.97
SNU56YDR240C YCR022CP25620 114 aa2.74□□□□□ -1.97
SNU56YDR240C UTR4P32626 227 aa2.74□□□□□ -1.97
SNU56YDR240C FAA2P39518 744 aa2.74□□□□□ -1.97
SNU56YDR240C HAT2P39984 401 aa2.74□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms