RNA–Protein interactions for RNA: YDR200C

VPS64, Transcript of Protein required for cytoplasm to vacuole targeting of proteins, yeast

Gene VPS64, Length 1,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS64	YDR200C	YLR287C	Q05881	355 aa		2.78	□□□□□ -1.96
VPS64	YDR200C	RGC1	Q06108	1083 aa	Known RBP	2.78	□□□□□ -1.96
VPS64	YDR200C	VPS36	Q06696	566 aa		2.78	□□□□□ -1.96
VPS64	YDR200C	PEX15	Q08215	383 aa		2.78	□□□□□ -1.96
VPS64	YDR200C	TRE2	Q08693	809 aa		2.78	□□□□□ -1.96
VPS64	YDR200C	SRO7	Q12038	1033 aa		2.78	□□□□□ -1.96
VPS64	YDR200C	GPM3	Q12326	303 aa		2.78	□□□□□ -1.96
VPS64	YDR200C	SFI1	Q12369	946 aa		2.78	□□□□□ -1.96
VPS64	YDR200C	SUC2	P00724	532 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	SIR3	P06701	978 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	FRS1	P15624	595 aa	Known RBP	2.77	□□□□□ -1.97
VPS64	YDR200C	CDC43	P18898	376 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	AAT2	P23542	418 aa	Known RBP	2.77	□□□□□ -1.97
VPS64	YDR200C	MNE1	P24720	663 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	SEC65	P29478	273 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	PET127	P32606	800 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	WBP1	P33767	430 aa	Known RBP	2.77	□□□□□ -1.97
VPS64	YDR200C	PMC1	P38929	1173 aa	Predicted RBP	2.77	□□□□□ -1.97
VPS64	YDR200C	OAF1	P39720	1047 aa	Predicted RBP	2.77	□□□□□ -1.97
VPS64	YDR200C	PIG2	P40187	538 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	YPS6	P40583	537 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	GPP1	P41277	250 aa	Known RBP	2.77	□□□□□ -1.97
VPS64	YDR200C	DLD2	P46681	530 aa	Known RBP	2.77	□□□□□ -1.97
VPS64	YDR200C	GLG2	P47011	380 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	MNT2	P53059	558 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	COG7	P53195	279 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	IPI3	P53877	555 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	ECM9	Q02202	377 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	PPN1	Q04119	674 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	VBA4	Q04602	768 aa	Known RBP	2.77	□□□□□ -1.97
VPS64	YDR200C	YDR222W	Q04925	415 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	YFT2	Q06676	274 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	RPS21B	Q3E754	87 aa	Known RBP	2.77	□□□□□ -1.97
VPS64	YDR200C	NAG1	Q8TGN9	163 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	SST2	P11972	698 aa	Known RBP	2.77	□□□□□ -1.97
VPS64	YDR200C	KAR3	P17119	729 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	TRX1	P22217	103 aa	Known RBP	2.77	□□□□□ -1.97
VPS64	YDR200C	ADY2	P25613	283 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	YKL050C	P35736	922 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	JNM1	P36224	373 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	AIM18	P38884	321 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	SPC72	P39723	622 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	YEN1	P40028	759 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	LTP1	P40347	161 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	RAD26	P40352	1085 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	NDC80	P40460	691 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	FHN1	P53279	174 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	VPS9	P54787	451 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	SMX3	P54999	86 aa	Predicted RBP	2.77	□□□□□ -1.97
VPS64	YDR200C	ELP3	Q02908	557 aa	Known RBP	2.77	□□□□□ -1.97
VPS64	YDR200C	YMR178W	Q03219	274 aa	Known RBP	2.77	□□□□□ -1.97
VPS64	YDR200C	YPR114W	Q06107	315 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	YLR456W	Q06199	204 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	NEW1	Q08972	1196 aa	Known RBP	2.77	□□□□□ -1.97
VPS64	YDR200C	MRH1	Q12117	320 aa	Predicted RBP	2.77	□□□□□ -1.97
VPS64	YDR200C	USV1	Q12132	391 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	POM34	Q12445	299 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	EFG1	Q3E705	233 aa	Known RBP	2.77	□□□□□ -1.97
VPS64	YDR200C	AFI1	Q99222	893 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	YOR338W	Q99326	363 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	IZH4	Q99393	312 aa		2.77	□□□□□ -1.97
VPS64	YDR200C	INH1	P01097	85 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	YKR104W	P0CE69	306 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	SPT15	P13393	240 aa	Known RBP	2.76	□□□□□ -1.97
VPS64	YDR200C	PHO13	P19881	312 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	TSR4	P25040	408 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	SNT1	P25357	1226 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	BRF1	P29056	596 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	BIT2	P38346	545 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	RRP3	P38712	501 aa	Known RBP	2.76	□□□□□ -1.97
VPS64	YDR200C	MSR1	P38714	643 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	CCT6	P39079	546 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	YEL028W	P39989	153 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	ARG2	P40360	574 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	YIL077C	P40508	320 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	IST3	P40565	148 aa	Predicted RBP	2.76	□□□□□ -1.97
VPS64	YDR200C	MKT1	P40850	830 aa	Known RBP	2.76	□□□□□ -1.97
VPS64	YDR200C	RPS10B	P46784	105 aa	Known RBP	2.76	□□□□□ -1.97
VPS64	YDR200C	SIP4	P46954	829 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	RFX1	P48743	811 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	SPC105	P53148	917 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	YGR021W	P53212	290 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	NRM1	P53718	249 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	NOP15	P53927	220 aa	Predicted RBP	2.76	□□□□□ -1.97
VPS64	YDR200C	YNL040W	P53960	456 aa	Predicted RBP	2.76	□□□□□ -1.97
VPS64	YDR200C	TGL2	P54857	326 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	BET4	Q00618	327 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	ATG16	Q03818	150 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	YDR131C	Q03899	556 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	RPC11	Q04307	110 aa	Predicted RBP	2.76	□□□□□ -1.97
VPS64	YDR200C	YMR018W	Q04364	514 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	IVY1	Q04934	453 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	BNA5	Q05979	453 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	YPS7	Q06325	596 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	OPY2	Q06810	360 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	RPS10A	Q08745	105 aa	Predicted RBP	2.76	□□□□□ -1.97
VPS64	YDR200C	CHS5	Q12114	671 aa	Known RBP	2.76	□□□□□ -1.97
VPS64	YDR200C	SEY1	Q99287	776 aa		2.76	□□□□□ -1.97
VPS64	YDR200C	RPS17A	P02407	136 aa	Known RBP	2.75	□□□□□ -1.97
VPS64	YDR200C	GAL4	P04386	881 aa		2.75	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 38.5 ms