RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC1	YDR164C	LYS14	P40971	790 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	IRC6	P43615	237 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	FYV8	P46949	817 aa	Known RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	VPS4	P52917	437 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	MLC1	P53141	149 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	YGL036W	P53185	909 aa	Predicted RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	ARE2	P53629	642 aa	Known RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	HST1	P53685	503 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	CBK1	P53894	756 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	INA17	Q02888	182 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	IRC4	Q03036	179 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	GYL1	Q04322	720 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	YMR114C	Q04471	368 aa	Known RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	AIM33	Q04516	312 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	PAL1	Q05518	499 aa	Known RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	UTP21	Q06078	939 aa	Predicted RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	SUE1	Q06524	206 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	VAM6	Q07468	1049 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	CRD1	Q07560	283 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	COX17	Q12287	69 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	SUL2	Q12325	893 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	YKL068W-A	Q3E826	78 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	RPO41	P13433	1351 aa	Known RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	VMR1	P38735	1592 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	SWI1	P09547	1314 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	NUP170	P38181	1502 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	PDR12	Q02785	1511 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	DNF2	Q12675	1612 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	CTT1	P06115	562 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	RAD1	P06777	1100 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	RPB2	P08518	1224 aa	Known RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	SPO12	P17123	173 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	TPM1	P17536	199 aa	Known RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	SAM2	P19358	384 aa	Known RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	OLE1	P21147	510 aa	Known RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	SGF29	P25554	259 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	CDC60	P26637	1090 aa	Known RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	GPI10	P30777	616 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	RAD16	P31244	790 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	MRP20	P32387	263 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	CNS1	P33313	385 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	LTV1	P34078	463 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	0.83	□□□□□ -2.28	not detected
SEC1	YDR164C	NUP120	P35729	1037 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	TEF4	P36008	412 aa	Known RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	GEX2	P36173	615 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	YPK3	P38070	525 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	YBR225W	P38321	900 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	RRP3	P38712	501 aa	Known RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	SMF1	P38925	575 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	UME6	P39001	836 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	NPR2	P39923	615 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	ARB1	P40024	610 aa	Known RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	DSN1	P40568	576 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	YIR014W	P40570	242 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	IAH1	P41734	238 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	VTC2	P43585	828 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	RMD8	P43620	662 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	SIP4	P46954	829 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	SGM1	P47166	707 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	COS12	P53053	380 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	COG1	P53079	417 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	RBG2	P53295	368 aa	Known RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	YGR250C	P53316	781 aa	Known RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	YNR061C	P53747	219 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	CSL4	P53859	292 aa	Predicted RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	VPS9	P54787	451 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	REG1	Q00816	1014 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	YSA1	Q01976	231 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	VPS60	Q03390	229 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	EBS1	Q03466	884 aa	Known RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	PRP42	Q03776	544 aa	Known RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	TAF11	Q04226	346 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	MFB1	Q04922	465 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	RSF1	Q05043	376 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	STP3	Q05937	343 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	VIP1	Q06685	1146 aa	Known RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	AIM6	Q07716	390 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	PLP2	Q12017	286 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	RUD3	Q12234	484 aa	Known RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	EDE1	P34216	1381 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	ADE6	P38972	1358 aa	Known RBP	0.83	□□□□□ -2.28
SEC1	YDR164C	IML1	P47170	1584 aa		0.83	□□□□□ -2.28
SEC1	YDR164C	BCK1	Q01389	1478 aa		0.82	□□□□□ -2.28
SEC1	YDR164C	ILV1	P00927	576 aa	Known RBP	0.82	□□□□□ -2.28
SEC1	YDR164C	TPK1	P06244	397 aa		0.82	□□□□□ -2.28
SEC1	YDR164C	SUI3	P09064	285 aa	Known RBP	0.82	□□□□□ -2.28
SEC1	YDR164C	TY2A-LR1	P0C2J4	438 aa		0.82	□□□□□ -2.28
SEC1	YDR164C	TY2A-F	P0CX61	438 aa		0.82	□□□□□ -2.28
SEC1	YDR164C	TY2A-GR2	P0CX62	438 aa		0.82	□□□□□ -2.28
SEC1	YDR164C	PET122	P10355	254 aa		0.82	□□□□□ -2.28
SEC1	YDR164C	MRP2	P10663	115 aa	Predicted RBP	0.82	□□□□□ -2.28
SEC1	YDR164C	HOM3	P10869	527 aa		0.82	□□□□□ -2.28
SEC1	YDR164C	OM45	P16547	393 aa		0.82	□□□□□ -2.28
SEC1	YDR164C	KAR3	P17119	729 aa		0.82	□□□□□ -2.28
SEC1	YDR164C	SPO16	P17122	198 aa		0.82	□□□□□ -2.28
SEC1	YDR164C	YCR006C	P25350	157 aa		0.82	□□□□□ -2.28
SEC1	YDR164C	TY2A-C	P25383	438 aa		0.82	□□□□□ -2.28
SEC1	YDR164C	MGR1	P25573	417 aa		0.82	□□□□□ -2.28
SEC1	YDR164C	CMK1	P27466	446 aa	Known RBP	0.82	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 81.2 ms